Nothobranchius furzeri (turquoise killifish): 107388695
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Entry
107388695 CDS
T05163
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03420
Nucleotide excision repair
nfu04115
p53 signaling pathway
nfu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107388695 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
107388695 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
107388695 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107388695 (ddb2)
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107388695 (ddb2)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107388695 (ddb2)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107388695 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
ANAPC4_WD40
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
107388695
NCBI-ProteinID:
XP_015819831
UniProt:
A0A9D3BY06
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All DBs
Position
sgr13:complement(19637368..19645259)
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AA seq
503 aa
AA seq
DB search
MKNKPANKSDACESKSKKKRAAKDSDPAVCKTPRDRKDGETSDPGPPCKFSRVHRRNGHH
ASILHYIYKSTLGQSLHSQMRQCLQEPFLRSLSSYHFHGASSPFDRRITCLEWHPTHPTT
LAAASKGGDIFLWDFNNPTRKSFIQGVVYVRRARRHCCWFSAQMGPGDSVTDMKFNQLNP
SQLFTSSMGGTTALREFSGTTLTVFARTDALNFWYCCVDVSVSRQMLVTGDNTGQLLLVG
LDGQKIFSDKLHKAKVTHAEFNPRCDWFLATASIDHTVKLWDLRNIRDKKSFLHELPHER
GVNSAYFNPLDCSKLLTTDQHDQIRVYSSCDFSKPQHIIQHPHRQFQHLTPIKATWHPMY
DLIVAGRYPDDRICTGDLRSVDIFDSNSGDLVFQLYDSTASGIKSVNKFSPMGDVIGSGM
GVTLLVWDHDESLVSGRHKQHEETPSSVERSRAPRRSQPRSSRDRKGSAADTKLKKKLAS
LEEAETKSRTGSTKQKLAQARKK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaagcccgccaacaagtcggacgcatgcgaatcaaaaagtaagaagaaacga
gctgcaaaagactctgatccagctgtttgtaaaacaccacgagacagaaaggatggagaa
acatctgatccagggcctccttgtaagttttcaagagtccacaggaggaacgggcaccat
gcgagcatcctgcattatatttacaaaagcaccctgggccaaagcctacactctcagatg
agacaatgtctccaggagcccttccttcgctccctgtcctcctaccacttccacggcgcc
agcagtccgttcgatcgcagaatcacctgtctggagtggcaccccacccatcccaccacg
ctggctgcagcctctaaaggtggagacattttcttgtgggacttcaacaaccccacgaga
aaaagctttattcaaggggttgtgtatgtcagacgagcacgaagacactgttgttggttt
tctgctcagatggggcctggagactcagttacagacatgaagtttaaccagttaaacccc
tctcagctgttcacctcatccatggggggtacgacagccctgcgagagttcagtgggacg
acacttacagtttttgccagaacagatgcactgaacttttggtactgctgtgttgacgtg
tctgtgagtcggcagatgctcgttaccggtgataacacagggcagctcttacttgtcgga
ctggatggtcaaaagattttcagtgacaagctgcacaaagccaaagtgacccatgccgag
tttaacccccgctgtgactggtttctggcgacggcctccatcgaccacacggtgaagctg
tgggacctcaggaacatcagagacaagaaaagcttcctccatgagttacctcatgagaga
ggagtcaactcggcctatttcaacccgctggactgctcgaagctgctcaccacagatcaa
cacgaccagattcgtgtttactcttcctgtgacttttccaagccccaacacatcatccag
cacccacacaggcagtttcagcacctcacacccatcaaggccacgtggcatcccatgtat
gacctgattgtggccggacgctaccctgatgaccggatctgcaccggggatctgaggagc
gtcgacatctttgactccaacagtggggatcttgtgttccagctttacgattccactgcc
tccgggattaaatctgtcaataaattcagtccgatgggtgacgtgatcggatctggtatg
ggtgtaaccctgctggtctgggaccacgatgagtcactggtcagcggtcggcacaaacag
cacgaagaaactccgtcctcagttgaaaggtcgagggctccgaggaggagtcagccgcgc
tccagcagagaccgaaaaggttcggctgctgacacaaaactcaagaagaaactggcttct
ctggaagaagccgagaccaaaagcaggactgggagcacgaaacaaaaactagctcaggct
agaaagaagtga
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