Nothobranchius furzeri (turquoise killifish): 107388725
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Entry
107388725 CDS
T05163
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107388725 (dennd4a)
Membrane trafficking [BR:
nfu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
107388725 (dennd4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR
PPR_long
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
107388725
NCBI-ProteinID:
XP_015819885
UniProt:
A0A1A8U1M5
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All DBs
Position
sgr13:20472927..20498895
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AA seq
1682 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDSPKPLEEDLHFDDAGTKSVKSKAPITDVAIVIRSLGEEVP
PGFTCVESTPSGLSAELNGASLRGPQIFLCYKRGRDKPPLTDLGVLYEWKEKLKPGCHIV
QTTPSGRPANISSSSSQRIYVTYRRAPKSQPHTSLAVTDVCVIIPAKGETPPHTFCKVDK
NLNSSMWGSSVYLCYKKSLAKANTIAYKAGLLCRYPEEDYESFPLPESVPMFCLPMGAMI
ECWPAHTKHSLPVFSTFVLTGASGEKVYGAAIQFYEPYSEENLSERQRSQLGLPSSDFGP
DGTRNVYNNKSICLLSHWPFFPSFRSFLTFLYRYSISGPHALPIEKHISHFMQSVPFPST
QRPRILVQLSPHDSLILSQPVSSPLPLSGGSLSTLLLNLGPKNAVTLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGLDSRYFDLYVPP
ADISCVDLDTNTISQKDDKKALTWKTLPRRACKHLLNTLNKLYQQLSEGGHLNRDDVQMD
HTVTDSELYGGKSLHTLELEIQEAFLRFMAAILRGYRSCLQPITQAPSEKTTDVTSLFDL
QGFLKSRDRSHQRFYSLMTKTQMFSRFIEECSFVSDKDASLAFFDECVDKLFTTGSKMDS
ERQEDNRLIELDESHRSEHTVYINPPELPPLPQGEEHPLCYSYSGFPVLMSELLEPMEGL
NPLSAGIASRHSSPASPTAIFRRSKQEIKSAHKMAKTHSSVPQMWSKCLLRHCYGLWFIC
LPGLVGNCHSKVRALRTAHDVLRKMQDKKLQAPDEVCYRVLLQLCGQFSQPVMAVRVLFE
MKKAGVQPNAITYGYYNKAVLESTWPSTTRGGYFLWGKLRNVILGVLQFKQAGRKLQTPH
RDPQLSDGSDLDTVSHGSLDSANDSAERTSIDTDFTKMDSSDDGFSTGGQSDQGYDSLSK
EEERVCSREMDASASGEDKGSRQSSSGHRVTLGPSGDNPPCAERPRFLDLSGGQGFVRLT
VPLLSAAKQNQLSTDRLGGVEEEETETDKQKPLVENGGISIDGTERRAGVETRFDPQMVT
ECDQDSSRSPSTNLTEEIETYINHSNSPLSSYAPSLDFQNPSSPLFRSPSFTHTSSLSST
LSRSNTHLSLPVRSKERLRPSPSLPLGMCNKDKERPSSLILPSSPTPSASSFSMDSLLTP
TLDIFKSSVISAGKGVAEKASRLYSRLSSQTSLTQDANCDRMSVSSLTSADTECSSLLDN
DSCLDPLGFTSPQHCSTTRVRRSPVASHQTNLGSPSSPNRVFRHNSFSGGLALPSRVPHT
PDSSPDVSRFQPSPNYIIEVLMSSCSICKTCDCMVYDEEIMAGWTANDSNLNSTCPFCGT
AFLPFLNVEIKDLRPQNRSSKRSNPVKEEDMSAPLSPEDNMSDAAAQPSAAPAQKQDSIW
SSGTSPPASDPVTVPYLSPLVLWKELESLLVNEGDQALSSPSVVDQHPIVFWNLVWYFKR
LELPSNLPALILASQHCSHGDQTPPIVSSEDSKQVLVRIMWDNLKLHKDKVQPCYVLWNA
HCANSLIRSGLCEEGQLFTVELLQGFVRSIKKSDVHQPMSQIIQLLGPELGFKRQRSLYR
DLLFLTLVALGRNNININAFDREYRLAYDRLTPSQVKLTHNCDRPPGAGVMECRRTFGEP
SL
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggataaagggccccgtgtagccgactactttgtggttgctggcctcaccgac
tcgcccaagcctcttgaggaggatttgcactttgacgatgctggcaccaagtctgttaaa
tccaaagctcccatcaccgatgttgccatagtgatacgctccctcggtgaggaggtaccc
ccgggctttacctgtgtggagagcaccccctcaggcctgtccgctgagctcaacggggcc
agtctccggggtccgcagatcttcttgtgctacaagagaggcagagataagcctccactg
acagatcttggagttctgtatgagtggaaagagaagcttaagcctggatgccacatcgtc
caaaccacaccctcaggtcgtcccgccaacatcagcagctcgtcctctcagcgcatctac
gtcacctaccgccgcgcaccgaagagccagcctcacacctccctggctgtcaccgacgtc
tgcgtcatcattcccgctaaaggggagacccctcctcacaccttctgcaaggtggacaaa
aacctcaacagcagcatgtggggatcctcggtctacctttgctataagaagtctctagct
aaagcaaacacaatcgcatataaagcaggtttactgtgcaggtacccagaagaggactac
gagtccttccccctgcctgagtccgtgcctatgttctgtctgcccatgggggcgatgatt
gagtgctggccagctcacaccaaacactccctgcctgttttctctacgtttgtgctgacg
ggggcctctggagaaaaggtgtacggagcagccatccagttttatgagccttactccgag
gagaatctgtcggagcgtcagcgctcgcaactcggcctgccaagctccgattttggacct
gatgggacaagaaatgtttataacaacaagagcatctgcttactctcccactggcccttc
tttccatccttcagaagttttctcacgttcctctacagatactccatctctgggccacat
gcactccccattgaaaagcacatctctcattttatgcaaagtgtgccgtttccctccact
caaagaccacgcatccttgtgcagttgtctccacatgacagcctcatactgagccaaccc
gtgtcctctccactgcctcttagcggtgggagcctctccactttactcctgaatctggga
cccaaaaatgcggtcactctgctggttctggctgtcacagagcacaagatcctggttcat
tccttgcgtccagctgtgctcaccagtgtcacagaagcccttgtgtctatgatctttcct
tttcactggccatgcccctacatccctctgtgcccactggccttggcagatgttctcagc
gctccatgtcctttcattgtgggtttggactccagatactttgacctttatgtgcctcct
gctgatatcagctgtgttgacttggacaccaacaccatctcccaaaaagacgacaagaag
gctttgacttggaaaaccctgcctcggagagcttgtaaacatctcctgaataccctgaat
aagctctatcagcagctctcagagggtggtcatttaaaccgagatgatgtgcagatggac
cacacggtgaccgacagcgagctgtacggtgggaaaagcctgcacactctggagctggag
atccaagaggccttcctccgcttcatggcagccatcctgcggggctaccgctcctgtctg
cagcccatcacccaggccccctctgagaaaaccactgatgtcacctcgctttttgatctg
caaggctttctgaagagcagagatcgctcccatcagaggttttactccctcatgacaaag
actcagatgttcagccgtttcatagaggagtgctcctttgttagtgataaagatgccagc
ctggctttctttgatgagtgtgttgataagttattcactactggaagcaagatggacagc
gagcgtcaagaggacaacagactgatcgagctggacgagtcccaccgtagtgagcacacg
gtctacatcaaccctccagagctgcctcctcttcctcagggggaagaacatcctctgtgc
tacagctactccgggtttcctgtgctgatgtcggagctcctagagccaatggaaggacta
aatcccctgtcagctggcattgcttcacgccacagcagcccagccagccctacggccatc
ttcagacgctccaaacaggagatcaaatcagcccataaaatggccaaaacacattcctcc
gtgcctcagatgtggtccaagtgtctgcttcgccactgctacggcttgtggtttatctgc
ttgcccgggcttgtgggtaactgtcactccaaggtgcgagctctgcgcacagctcatgat
gtgttgaggaagatgcaggacaagaagctgcaggctccagatgaggtgtgctaccgcgtt
ctgctgcagctgtgtggccagttcagtcagccggtgatggctgtcagggtgttgtttgag
atgaagaaggccggagttcaaccaaatgctataacttatggttactataacaaggcggta
ttggagagcacctggccctccaccaccagaggaggctacttcctgtgggggaaactcagg
aacgtgatcctgggtgtcctccagttcaagcaagcagggagaaagctccagactcctcac
agagacccacagctttcagacggcagtgacctggacacggtcagtcatggcagtctggac
agcgccaatgattccgctgagcgcacctccatcgacacagacttcactaaaatggactcg
agtgatgatggatttagcacaggtggacagtcggatcaaggctacgactccctgtccaaa
gaggaggagagggtgtgcagcagagagatggacgcctcggcatcgggcgaagacaaaggc
tccagacagtctagcagcggacacagggtgactttgggtccatctggggacaatcctcca
tgtgcagagaggcccagattcctggacttgtctggaggacagggatttgtgaggctcacc
gtccctctcctcagtgctgccaagcagaatcagctttccactgacagactaggtggagtg
gaggaggaggagacagagactgataaacagaaacctctggtggaaaatggtgggatctcc
attgatgggacagagaggagggccggtgttgagacgaggttcgatccccagatggtgaca
gagtgtgaccaggacagcagccgctcacctagcaccaacctcactgaggaaatcgaaacg
tatataaatcacagcaacagccctcttagcagctatgctcccagtttggattttcagaac
ccttcaagccctttgtttcgctcgccctcattcactcatacgtcctcactgtcctcaact
ctgtcccgctccaacacgcacctctcactgccggtcagatctaaggagaggctaaggccg
tcgccttctcttcctttggggatgtgtaacaaagacaaggagaggccctcctccttgatt
ttaccatcatcaccgactccctccgcctcatccttctccatggactcgctgctgaccccg
actctggacatcttcaagagcagcgtcatatcagcagggaagggcgtggctgagaaggct
agtcgcctctactctcgtctgtcctcccagacttcgttaacgcaggatgcgaactgtgat
cgaatgagcgtttcctcgctgacctcagcagacacagagtgttcttcgctgctcgataat
gactcctgtctggacccactcggcttcacttcccctcagcactgcagcacgacccgggtc
aggaggagtcctgtcgcgtctcaccaaacgaacctgggcagtccaagcagccccaacaga
gtgttcagacacaactcgttttctggtggtctggctcttccgtctagagttcctcacact
ccggattcctccccagatgtcagccgcttccagccctctcctaattacatcatagaggtg
cttatgtccagctgttcaatttgtaagacgtgtgactgcatggtgtatgatgaagagatc
atggcaggatggacagcaaacgactcaaacctcaacagtacctgtccattctgtggcaca
gccttcctgcctttcctcaatgtggaaatcaaagatctcagaccacaaaataggtcttct
aagagaagtaatcccgttaaagaggaggacatgtctgcaccgctcagtcctgaggacaac
atgtctgatgctgcagctcagccatctgcagctccggctcagaagcaggacagcatctgg
agctctggcacatctccaccagcctctgatccagtgacggtgccgtacctgagccctttg
gttctgtggaaggagctggagagcctgctggtaaacgagggcgaccaggccctctcctcc
ccaagtgttgttgaccaacaccctattgtcttctggaacctggtgtggtactttaaaagg
ctggagctaccaagtaacctgccagctttaatcctggcctcccaacactgcagccatgga
gaccagactcccccgatcgtttcctcagaggacagcaaacaggtgctcgtgaggatcatg
tgggacaacttgaagttgcacaaagacaaagtccaaccctgctatgtcctatggaatgct
cactgtgccaactccttgatccgatctgggctgtgtgaagaaggccagctcttcaccgtg
gagctgctgcagggcttcgtgaggagcatcaagaaaagtgatgttcatcagcccatgagc
cagatcatccagctgcttgggcctgagttgggcttcaagagacagaggagcctctacaga
gatttactgtttctgactcttgtggctttggggagaaataacattaatatcaatgctttt
gatcgggagtaccggttggcctatgaccgcctcacgcccagccaggttaaactgacacat
aactgtgacaggcccccgggggctggggtcatggagtgcaggaggacttttggagagccc
agtttgtga
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integrated database retrieval system
