Nothobranchius furzeri (turquoise killifish): 107388946
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Entry
107388946 CDS
T05163
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03020
RNA polymerase
nfu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107388946 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
107388946 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfu03021
]
107388946 (polr3b)
Enzymes [BR:
nfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107388946 (polr3b)
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
107388946 (polr3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
MES-3_M
Motif
Other DBs
NCBI-GeneID:
107388946
NCBI-ProteinID:
XP_015820249
UniProt:
A0A8C6VXW5
LinkDB
All DBs
Position
sgr13:complement(29362641..29377870)
Genome browser
AA seq
1131 aa
AA seq
DB search
MELLGGEFGEMTPQELAAPVNTVAEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPLWYLNYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNTLSEDAPIAIIF
KGMGVESDQEIVQMIGTEENVMASFAPSLEECQKAQIFTQTQALRFLGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDHYKLVNTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKK
GQTMVNNKHIEDLSQGYRTFEDFLHEGLVEYLDVNEENDCQIALYEHMINKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLVYPQRPMVK
TKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLRR
YTNQTFDKVMGPMLDAATRKPVWRHNILDADGICSPGERVENKQVLVNKSMPTVTQTPLE
GSAQPGQPQYRDVPISYKGSTDSYIEKVMISSNAEEASLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
ECGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSRYE
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgggaggagagtttggagaaatgactcctcaggagttggcggctcctgtc
aacactgtggcggaaaaatggaagttgttaccagcctttctgaaggtgaaaggtttggtg
aagcagcacattgactcgtttaactatttcattaacgttgagatcaagaaaattatgaaa
gcaaatgagaagatcacaagtgatgctgatccactgtggtacttgaactacctcaatatc
tacgttgggatgcccgatgttgaggaaagctttaacgtaacccgaccggtttctcctcat
gagtgtcgcctcagggacatgacctactcggcgcccatcacagtggacatagaatacact
cgcggcagtcaaaggatcatccgaaacgctctgcctattggaaggatgccgatcatgctg
cgaagctcgaactgtgttctcacaggaaagactcccatggagttttctaaactcaacgaa
tgtcctctggacccaggaggttattttattgtaaaaggccaggagaaagtcatcctgatc
caggagcagctgtccaagaatcggatcattgtggaacaggacaggaagggtgcagtcggc
gcctcggttaccagctccactcacgagaagaaaagcagaaccaacatgattgtgaagcag
ggtcggttctacctgagacacaacacgctgtctgaagacgctcccatcgctattatattc
aagggtatgggtgtagaaagtgaccaggagatcgttcagatgatcggcaccgaggagaac
gtcatggctagcttcgccccgagtctggaggagtgtcagaaagcccagatcttcacccag
actcaggctctgaggtttctgggtaataaagtccggcgccagcggatgtgggggggtccg
aagaagaccaagatggaggaagccagagagctgttggcgtctctcatcctcacccatgtt
ccagtgaaggagtttaacttccgggcgaagtgtatttacctagcggtgatggttcggaga
gtcatcctggctcaaggcgacaacaaggtggatgacagagattactatggcaacaaacgt
ctggagttggccggacagctcctgtctctgctgtttgaggatctgtttaagaagtttaac
tctgagctgaagaagatcgctgaccagatcatccccaagcagcgagccgcgcagttcgat
gtggtcaaacacatgcggcaggatcagatcaccaacggcatggtcaacgccatttccacc
ggtaactggtctctgaagagattcaagatggaccgtcagggtgtcacccaggttctgtct
cgtctctcctacatctctgctctcggcatgatgacaaggatctcctcccagttcgagaag
accaggaaggtcagcgggccacgctccctgcagccgtcgcagtgggggatgttgtgtccg
tctgatactcccgaaggagaggcctgcggtttggtaaagaacttggctctgatgactcac
atcaccacagacatggaggacggccccattataaaactggccttcaaccttggggtggaa
gacgtcaacctgctgtgtggggaggagctctcctatccaagcgtcttcctggttttcctc
aacggaaacattctgggtgtgatcagagaccattacaagctggtcaacactttcagactc
atgcgccgggcgggtttcatcaacgagtttgtgtccatctccaccaacctgaccgaccgc
tgcgtctacatctcatctgacggaggtagactctgcaggccgtacatcatcgtgaagaag
ggccagacgatggtgaataataaacacattgaagatctgtctcaaggctacagaaccttt
gaggacttccttcatgaaggcctggtggagtacctggatgtgaacgaggagaacgactgc
caaattgctctgtatgaacatatgatcaacaaagacacgacccacttggagatcgagccc
ttcacgctgctcggagtgtgtgcgggcctcattccctacccccaccacaaccagtccccc
aggaacacgtaccagtgcgctatgggcaagcaggccatgggaactatcggctacaaccag
aggaaccgcatcgacactctgatgtacctgctggtttatcctcagaggcccatggttaaa
acaaaaaccatcgagctgattgactttgagaaactgcctgcaggtcagaacgccaccgtg
gccgtcatgagctacagcggctacgacattgaggacgctctggtcctcaacaaggcctcg
ctggacagagggtttggtcggtgccttgtctacaaaaacgctaagtgcaccctgcgtcgc
tacaccaaccagacctttgataaagtgatgggacccatgctggacgctgccacgcgtaag
cccgtatggagacacaacatcctggatgctgacggtatctgctcccctggtgaacgagtg
gagaacaagcaggtcctggtgaataaatctatgccaaccgtcacccagacgccactggag
ggcagcgcccagccaggccagccccagtaccgagacgtgcccatcagctacaagggctca
acagactcgtacatcgagaaggtcatgatctcgtccaacgctgaggaagcctccctcatc
aagatcctcctgagacagacgaggagaccggagatcggagataaattcagcagtcggcac
ggacagaaaggtgtttgtggtctcatcgtccctcaggaggacatgccgttctgtgactcg
ggaatctgtccggacatcatcatgaatcctcacggatatccctccagaatgacggtggga
aagctgatagagctgctggctgggaaggcgggggttctggacggacggtttcactatggg
acggcttttggaggcagcaaagtgaaggatgtgtgtgaggatctgatccgatatggatac
aactaccagggcaaggactacgtcacctcaggaatcactggagagcctctggaggcctat
atctactttggaccggtctattaccagaaactgaagcacatggttctggacaagatgcac
gccagagcccggggccccagagctgttctcaccaggcagcccacggagggtcgctccaga
gacggaggtctacgtttaggggagatggagcgcgactgtctgatcggctacggggcgagc
atgttgctgctggaacgcctgatgatctccagtgacgccttcgaggtggacgtttgtgga
gagtgcggtctgctgggatactctggatggtgccactactgcaagtcgtcctgtcacgtt
tcctctctgagaatcccgtacgcctgcaagctgctgttccaggagctccagtccatgaac
atcatcccgcgactcaaactgtcgcgttacgagtga
DBGET
integrated database retrieval system
