Nothobranchius furzeri (turquoise killifish): 107388984
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Entry
107388984 CDS
T05163
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
107388984 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107388984 (rag1)
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107388984 (rag1)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107388984 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_10
zf-C3HC4_3
zf-RING_2
U-box
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
107388984
NCBI-ProteinID:
XP_015820302
UniProt:
A0A8C6NZ66
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All DBs
Position
sgr13:30316510..30323462
Genome browser
AA seq
1069 aa
AA seq
DB search
MAAESPETDGPRSFMPAELHHPHSKYSQWKFKLFRVKSMEKAPLPSETPPEIGVSLGISP
PGAPNIETDHGAGPASVMKLCLGGKSKENVEGPGRRVDIKLQEMETHMNHLRCLCRICGE
MLAKVQGPIHEVHGNLDQGSKCILRKMGCKLTTWPEVLLKVFKVDVTEDSESIHPLSFCH
RCWVVVKRGGGVCNFTRTKVPEWKPHSSHCHLCSPRKSSFQRTGRKRRKVIPRVQSLAKS
SREDQGDSIAISEKRALRPFGERHSPVLRAWNKTSIQREQWVKNITHCQNDHLSIKLISE
KLPVDFLLSFICLVCDHLLSDPLQSPCGHLFCRSCIIKFTHVLGPHCPACSLSCTPDDLI
PPAKAFVSALLSLPLLCPCEGCGERVQLGSLKTHRLRHELGKSEKQHSTETENYLLTNKG
GRPRQHLLSLTRRAQKHRLKELKTQVRVFADKEEGGDLKSVCLTLFLLALRSGNEHRQAD
ELEALMQGRGFGLSPAVCLAIRVNTFLSCSQYHKMYRTVKASSGRQIFQPLHTLRAAEKE
LLPGFHQFEWQPALKNVSAACSVGIINGLSGWASSVDDSPADTISRRFRYDVALVAALKD
LEEDIMEGLSETGMEDSACTLGFNVMIKECCDGMGDVSEKHGGGPAVPEKAVRFSFTVMS
VSALAEGEGEEVTIFTEPKPNSELSCKPLCLMFVDESDHEMLTAVLGPIVAERKAMKESR
LILSMGGMQRSFRFHFRGTGYDEKMVREMEGLEASGSTYVCTLCDSSRAEAAQNMVLHSI
TRSHEENLERYEIWRTNPFSESVEELRDRVKGVSAKPFMETQPTLDALHCDIGNATEFYK
IFQDEIGEVYKKVNPSREERRSWRAALDKQLRKTMKLKPVMRMNGNYARRLMTMESVEVV
CELVPSEERREALRELMRLYLQMKPVWRATCPAKECPDQLCRYSFNSQRFADLLSSTFKY
RYNGKITNYLHKTLAHVPEIVERDGSIGAWASEGNESANKLFRRFRKMNARQSKAYELED
VLKHHWLYTSKFLQKFMEAHKDSAKAFQATIDPEEIQDPEGTSLEATDF
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaaagcccagagacagatggtcccagatccttcatgcctgctgagctccac
catccccattctaagtattctcagtggaagtttaagctgtttagagtgaagtccatggag
aaggcacctctgcccagcgagacaccgcctgagataggagtctcattagggatctcacct
cctggagctccaaatatagagacagatcatggtgcaggtccagccagtgttatgaaatta
tgcctggggggaaaaagcaaggaaaacgtggaaggccctggcagaagagtggatataaag
ctgcaggaaatggaaactcacatgaaccatctcagatgcttgtgccgtatttgtggagaa
atgctggcaaaagtccaaggacccattcacgaggttcatggaaatctcgatcagggaagc
aaatgcattcttcgtaaaatgggctgcaagttaacaacctggccagaggtcctcctgaaa
gtcttcaaagtggatgtgaccgaagactcggagtccatccaccctctctccttctgtcat
cgatgctgggtggtcgtcaaacgagggggaggcgtctgcaacttcaccagaaccaaggtt
ccagaatggaagccccattcctcccactgccacctttgctcccccaggaagtcttcgttc
caaaggacagggaggaagaggaggaaagtcattcctagagtccagagtctggcaaaaagc
agccgggaggaccagggtgacagcattgctattagtgagaaaagagccctgagacccttc
ggagagcgtcacagtcctgtgctgagagcctggaacaaaaccagcatccagagagagcag
tgggtgaagaacatcacacactgccagaacgaccacctgagcatcaagctgatttctgag
aagctccctgtagacttcctcctttccttcatctgcctggtgtgtgaccacctgctctct
gatccactccaatccccctgtgggcacctcttctgccgcagctgcatcataaaattcacc
cacgtcctgggaccccactgccctgcgtgcagcctttcctgtacccctgatgatctcatc
ccccctgccaaagccttcgtatcggccctgctttctctgcctctgctgtgcccctgtgaa
ggttgcggcgagcgcgtgcagctgggctcactcaagacccaccgtttgagacatgagctg
ggcaaaagtgaaaaacagcactcaacagaaactgaaaactacttgttaactaataaaggg
ggaagaccccggcagcacttgctgtcgttgacccgtcgggcccagaagcatcggctcaaa
gagctgaagacccaggtgagggtatttgcagacaaagaagaagggggcgacctgaagtct
gtgtgtttgacgctttttctgctcgctctgagatctggaaatgagcatcggcaggcagat
gagctggaagccctgatgcaaggaagaggctttggattaagtcctgctgtgtgcttggcc
attcgggtcaatactttcctgagctgcagccagtatcataagatgtaccgcactgtcaaa
gcctcgagtggccgccagatctttcagcccttgcacaccctcagagctgcagaaaaggag
cttcttcctggctttcaccagtttgaatggcagccagctctcaagaacgtgtctgcagct
tgcagtgttggcattattaatgggctttctggatgggcttcttccgtggatgactcccca
gctgacaccatctctcgacgctttcgctatgacgtggcactggttgcagcattaaaggat
ctggaggaggacatcatggagggtctgagcgagaccgggatggaagacagtgcttgcacc
ttgggctttaatgtcatgatcaaggaatgttgtgatgggatgggggatgtcagtgaaaaa
catggaggaggaccagctgttccagaaaaggctgttcgcttctctttcactgttatgtct
gtatctgccctggctgaaggtgagggtgaggaggttacaattttcactgaacccaaaccg
aactccgaactgtcctgcaaacctctttgcctcatgtttgtagatgagtcagaccatgaa
atgctcacagctgtcctggggcctatagttgcagagcgtaaagcgatgaaggaaagcagg
ctgattctgtcgatgggtggcatgcagcgatcctttcgcttccatttcagaggaacaggg
tacgatgaaaagatggtccgggagatggagggactggaggcttcggggtccacgtatgtc
tgcactctgtgtgactccagtcgagcagaggccgctcaaaacatggtgctacactccatc
acccgcagtcacgaggagaacttggaacgttatgaaatatggagaaccaatcccttctct
gagtctgtagaagagctgcgagacagagtcaaaggagtttccgcaaagcccttcatggag
acccaacccactcttgatgcattacactgcgacataggcaacgcaacagaattctacaag
atcttccaagacgagatcggagaagtgtacaaaaaggtcaatcccagcagagaggaacgg
cgcagctggagggcagccctagataaacagctgaggaagacgatgaagcttaaaccagta
atgaggatgaacgggaactatgcccgcaggttaatgaccatggagtctgtggaggtggtg
tgtgagctggtgccctcagaggagaggagagaggccctgagggagctcatgaggctctac
ctccagatgaagcctgtgtggcgtgccacctgcccagcaaaggagtgcccagaccagctg
tgccgatacagctttaactcccagcgctttgctgacctcctctcctctaccttcaaatac
aggtacaatggaaagataacaaactacctgcacaagacccttgctcatgtgcctgaaatc
gtagaaagagacggttccatcggagcctgggccagcgaaggcaacgagtcggcaaacaaa
ttgttcagacgcttcaggaagatgaatgcgcgtcagtcaaaggcgtacgagctggaggat
gtgctgaaacatcactggctttacacttccaagttcttgcagaagttcatggaggctcac
aaagactctgccaaagccttccaggcaaccatcgacccagaggagatacaagatccagag
ggtacatccctggaagcaacagatttttga
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