Nothobranchius furzeri (turquoise killifish): 107389050
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Entry
107389050 CDS
T05163
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107389050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107389050
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107389050
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107389050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
107389050
NCBI-ProteinID:
XP_015820406
UniProt:
A0A1A7ZM32
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Position
sgr13:33802663..33809108
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AA seq
521 aa
AA seq
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MFGARKKFPEFVEAVDNDFPDEMYYSQGSMFPHRSDKDILSSPSPSSGQLSQLGPSLYGP
QSAIGFPVRSLGNSTPQLNRNLTQGSQLPSHITPTTGVPTMSLHTPPSPSRGTLPMSSRN
ILNHSQVGQGIGLSSRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQLCTISSMSGFGMNR
NQAFGMNNALASNIFNGTDGSDSVMGLDLSDFPALADRSRREGTGNPTPVSNPLAGRAPY
VGMVTKPSTEQTQDFSIHNEDFPALPGSNYKDTTLNNDDSKTNLNSTNKSTSSTDGPKFP
GDKTASAQNNNQKKGIKVLPDGRVTNIPSGMVTDQFGMIGLLTFIRAAETDPGLVHLALG
NDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLARY
GEDLLFYLYYMNGGDLLQILAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGTY
YFFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctagaaagaaatttccagagttcgtcgaggccgtcgacaatgacttccca
gatgaaatgtattacagccaggggtcgatgttcccacatcgatccgacaaagatatactg
tcttctccttcaccgtcgtctggtcagctgtcacagctcggtccaagtttgtacggtcca
caaagtgcaattggcttccccgttagaagcttgggaaacagcacacctcagttaaaccga
aatctcacgcaagggtcgcagctaccaagtcatatcaccccaacaacaggcgtccccacc
atgtcactccataccccgccgtcgccgagcagaggcacgttaccgatgagttccaggaac
atactaaatcactctcaggttggtcaaggcatcgggctgagcagcaggaccaatagtatg
agcagctcaggactcgggagccccaaccgcagctcacctagcatcatctgtatgcccaaa
cagcagccgtcacgtcagctgtgcaccataagcagcatgtcagggtttggtatgaaccgc
aatcaggcgtttgggatgaacaacgcgttagcaagcaacatcttcaacggcacagatggg
agcgacagcgtgatgggactggatctgtcagacttccccgcattagcagacaggagtcga
cgggaagggacgggaaatccaacaccggtgtccaacccgctagctggacgtgctccatac
gttggcatggtgacaaagccatcaactgaacagacacaagatttctccatccataacgag
gactttcctgcgctgcctgggtcgaactataaggacaccacactgaacaacgacgacagt
aaaactaacttgaactccacaaacaagagcacgtccagcacagatgggcccaagttcccc
ggagacaagacggcctccgcacagaacaacaaccagaagaaaggcatcaaggtgttacca
gatggtcgggttaccaacattccctcaggaatggtgacggatcagtttgggatgatcggt
ctgctgacgtttatacgagcagcggagaccgatccggggttggtccatctggcgctagga
aatgacctcaccacgctgggactcaatctcaactcaccagaaaacttgtaccccaagttt
gcctctccctgggcctcgtcaccatgtcgacctcaggacatcgacttccacgttccttcg
gagtatctgaccaacattcatataagggacaagttggcggcgattaagttggcccggtat
ggtgaagacctgctgttctacctgtactacatgaatggtggcgatctactacagatcctg
gcagcagtagagctctttaatcgggactggaggtaccacaaagaggagcgggtttggata
acaagagcacccggcatggagcccacactcaagaccaacacctacgagaggggcacctac
tacttctttgattgtcttaactggaggaaagttgccaaggaatttcatctggagtacgac
aagctagaagagaggcctcacgttccgacgacgttcaactacaatccagcccagcaggcc
ttctga
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