Nothobranchius furzeri (turquoise killifish): 107389091
Help
Entry
107389091 CDS
T05163
Symbol
lamb1
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107389091 (lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107389091 (lamb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
107389091
NCBI-ProteinID:
XP_015820472
UniProt:
A0A8C6M1N4
LinkDB
All DBs
Position
sgr13:complement(35902803..35961626)
Genome browser
AA seq
1797 aa
AA seq
DB search
MWQLRLTVLLVLQVFTYTQEDGASGAGSLDEVNLPELSDVCTKGSCYPATGDLLIGRVHQ
LFSTSTCGINHPEPFCIVSHLQEEKKCFVCDSTAPHAELNDYTNSHRIENVVTTFGPNRL
KTWWQSENGLENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQVYRYFAY
DCESSFPSVPHGPMQKVDDVICDSRYSDIEPSTEGEVIYRVLDPAFWIEDPYSPQIQNLL
KITNLRVKFTKLHTLGDNLLDSRVEIKEKYYYAIYDMVVRGNCFCYGHASECAPVNGGSH
SREGKVHGHCMCNHNTKGLNCEQCQDFYHDHPWRPAEGHNTNACKKCNCNQHSDSCHFNM
AVFVASGNVSGGICDDCQHNTTGHNCEQCKPFFYQHPQRDIRDPNICHPCNCDPLGSLNG
GICDRMTDVQNGLIAGQCRCKINVDGERCDLCKMGYYGLSDEPKGCKECTCSALGTAPGG
NPCDNKSGSCFCKRLVTGRDCDHCVPEHWGLSNDMDGCRPCDCDLGGAVNNQCDHMTGQC
ICKDHMFGRRCDQVESGFFFVALDHYTYEAENAKLGPGVAVVPRPHHYDRSPTWTGIGLV
NIPEGAFLEFSVDNIPESMEYDILIRYEPQLPDQWEEVIMMVMRPGPISADSRCVNTVPD
DDNQMISLHPSSRYAVLPRPVCFESGLNYTIHLSLPLYSALSDVHSPYMLIDSIVLMPHC
KNLEMFITSVGGDSGNNAWETFERYRCLENSQSVVKTPMTDICRNFIFSISALLHQGAKE
CQCDRQGSLSTVCDPSGGQCQCRPNVIGRSCDTCAPATFQFGASGCRECACDLQGSQSPF
CNTLTGQCVCVTGAYGRQCDRCLPGYWGFPSCRPCSCNGHADACDADTGRCIACRDHTTG
HNCDRCLDGFYGDPVLGSVDYCRPCMCPDGPGSLRQFAGRCYRSDDSELVVCVCNTGYKG
TRCEECLPGYYGNPAEAGGQCHPCQCNNNIDMMDPGSCDTLNGKCLRCLYHSEGNSCEKC
KLGYYGNALVQDCRACVCNQLGSEPSSCPSSSNCNCDQDSGQCYCRPNVIGQRCDHCAPD
TWNLASGLGCQSCNCDTKHSYETSCNEISGQCSCHPGFGGKTCSECRELFWGDPEVKCHA
CDCDPRGISEQQCNKANGHCVCVGGVSGPRCDSCARGYFGTFPDCHLCHQCFAEWDSIIG
QLTNQTHRLVNKIGAIKSSGINGPFRKAVESMEKSAADIQVILDQNPASEPQTEIQHLLQ
QASDLMASLNQTLDNTEETLFLADKQNSDIKNKLQLVTSDAQKLEQTVQELLDQVELIKN
SNIRGATDSVIKYFLQSQTAEVRANASTIIAGSPVETSAALRQLTEDKLNQSREPFLRNH
TEHAQKLDTLAGELQTLDLTLIIQKLCGNSPTSHDTCWNSSCGGLGCPDSEAKARCSGDG
CGVATTANVVLVKTQDSEREITSAMAEVEKLSNMVAEVKVQADEAKLSAQNVLMKTNKTK
QRVDQSNEELRNLIKLIKDFLTQDAADLESIELVANEVLAMELPTTPAQLQNITDEIRHK
VGQLGHVETILQQSSDDIQKAEALLVHARQASEDASDVKESVKRVKQALEEAQRAQTAAS
SALQQATDDVQTTRNLLSSVELETADTERQLHNATRRMQRLEQDLVQVKEKAVNVTLSSD
LTNQDASSIEKIAEEIKKDLETDVKHQYSTVEQLINKKAGGTGDAKKRAETLQKQAKEML
LQASDKLQLLKDLEKSYEDNQQILEVKAEQLVELEEAVKKLLQEISHKVTVYSTCLL
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagcttcggctcaccgtgctgctcgttcttcaggtgttcacctatactcaggag
gatggggcctcaggggcagggtccttggatgaggtcaacctcccagagctcagtgatgtg
tgcactaaaggcagctgttacccagcgacaggagaccttctgattggtcgtgttcaccag
ctgttctccacctccacctgtggaataaaccaccctgaaccattctgcattgtcagccac
cttcaggaggagaagaagtgctttgtttgtgactctacagcacctcatgctgagctgaat
gattacacaaacagccatcgcattgagaacgttgtcaccactttcggtccaaacagactg
aagacttggtggcagtctgaaaatggactggagaacgtcaccatccagctgaatcttgag
gctgaatttcacttcacacatcttattatgacctttaaaacatttcgaccagctgccatg
gtgattgagcgatctgcagactttgggaaaacgtggcaggtttaccgttactttgcttat
gactgtgagtcatccttcccttcagtcccccatggtccaatgcaaaaggttgatgatgtc
atctgtgactcgcgttactccgacattgagccgtccactgagggagaggtcatttacaga
gttctggacccagctttttggattgaagacccatatagcccacaaatccaaaacttgttg
aagattaccaatctacgggtgaaattcacaaaactgcacacacttggtgataacctgtta
gattctcgtgtagagatcaaagagaaatattactacgccatctatgacatggtggtaaga
ggaaactgcttctgctatggacacgcctctgagtgcgctccagtcaatggtggtagccat
tccagggaggggaaggttcatggtcactgtatgtgcaatcacaacaccaagggactgaac
tgtgaacagtgtcaggatttctaccatgaccatccctggagaccagcagagggacacaac
accaatgcttgcaagaagtgtaactgcaaccagcactctgactcctgccatttcaatatg
gccgtgttcgtggcttcaggaaatgtcagtggaggcatttgcgatgactgtcagcacaac
acaactgggcacaactgtgagcagtgtaaacctttcttctaccaacatccgcaacgagac
atcagagatccaaatatctgccatccctgtaactgtgaccctctgggctctttgaatgga
ggaatctgtgaccggatgacagatgtccaaaatggtttaattgctggtcaatgtcgctgt
aaaatcaatgtagatggagaacgctgtgacctttgcaagatgggttattatggtctcagt
gatgaacctaaaggttgtaaagaatgtacctgtagtgctctgggaactgctcctggagga
aacccttgtgacaacaaatccggaagctgtttctgtaagcgtctggtgacgggtcgggac
tgtgaccattgtgtgcctgaacactggggtctcagtaacgacatggatggttgcaggcca
tgtgactgtgatctgggaggtgccgtcaacaaccagtgtgatcacatgactggtcagtgt
atctgtaaagatcacatgtttggtcgtcgctgtgatcaagttgagtctggattcttcttt
gttgccctggatcactacacatatgaagccgaaaatgccaaacttggaccaggagtggca
gtggtcccaagacctcatcattatgatcgtagccccacctggacaggtattggcctagtc
aacatcccagagggggcgtttctggagttttctgtcgacaacatccctgaatccatggag
tatgatatcctaattcgctatgagcctcagctgcctgaccaatgggaggaggtaataatg
atggtgatgaggccgggaccaatcagtgcagacagccgctgtgtcaacacagtacctgat
gacgacaaccaaatgatttcactacaccccagctcacgatatgccgttcttccaaggcca
gtttgttttgaatctggactgaactacacaattcatctcagcttgcccctgtactcagcc
ctcagcgatgtccattctccatacatgctcatcgactcgattgtcttgatgcctcactgt
aagaacctggaaatgttcataacttcagttggaggggactctggaaataatgcttgggaa
acatttgagcgttatcggtgtctagagaacagccaaagtgttgtcaagacaccaatgact
gacatatgcaggaacttcatctttagtatttctgccctgttgcatcagggagccaaagaa
tgccaatgtgaccgtcagggttccctcagcaccgtgtgtgatcccagtgggggtcagtgt
cagtgtcgacccaacgtgattggcaggagctgtgacacatgtgctccagccacattccag
tttggagcaagtggctgcagagaatgtgcatgtgaccttcagggatcacagagccccttc
tgtaatacactgactggtcagtgtgtctgtgtcaccggtgcatatggacggcagtgtgat
cgttgcctgccaggctactggggatttccatcatgtcgaccctgctcttgcaatggacac
gctgatgcctgcgatgccgacacaggccgctgcatcgcctgcagggatcacaccactgga
cacaactgtgacagatgtctggatggtttctatggtgatccagtgttggggtcagtggac
tactgtcgtccctgtatgtgtcctgatggacctggaagtttgcggcagtttgcaggacgc
tgctatcgtagtgacgattctgaattggttgtttgtgtctgcaacacgggatacaaaggt
actcgctgtgaggaatgtttacctgggtactatggaaaccctgctgaggcaggtgggcag
tgtcatccatgtcagtgcaacaacaacattgacatgatggacccagggtcctgtgacacc
ttaaatggcaagtgtctcagatgcctataccacagcgaaggcaacagctgcgagaaatgc
aaactgggttactatggcaatgccttggttcaggactgcagagcatgtgtgtgcaatcag
ctggggagtgaaccatccagctgtccgtcttccagcaattgtaactgtgaccaagacagc
ggtcagtgttactgcaggcccaacgtgattggtcaacgctgtgatcactgtgctcctgac
acctggaatctggccagtggactcggctgccagagttgcaactgtgacactaaacactcg
tatgagacatcttgtaatgagattagtggtcagtgttcctgtcaccctggctttggagga
aaaacgtgcagcgagtgtagagagctgttctggggagaccctgaagtcaaatgccatgca
tgtgactgtgaccctcgtgggatctctgagcaacagtgtaacaaagccaatggtcactgt
gtctgcgtggggggagtgtctggacctcggtgtgacagctgtgctcgtggatattttgga
acatttccagactgtcacctctgccaccagtgttttgcagaatgggatagtatcattggt
cagttgaccaatcagacacatcgattggtcaataaaatcggggccattaaatccagtgga
attaacggaccattcaggaaggctgttgagagtatggaaaagagtgctgcagacatccag
gttattctcgaccaaaacccagcctcagaacctcaaactgagatccagcatctgttgcaa
caagccagtgacttgatggcatctctgaatcagactttggacaacactgaagagaccctg
tttctggcggacaaacaaaattccgacataaaaaacaaattacaattagtgacatctgat
gctcagaaactagagcaaacagtacaggagcttctggatcaagtagagcttatcaaaaac
tctaatatcagaggagcaacagacagtgttattaaatacttcctgcagtcccagacagct
gaagttagagccaatgcctcaaccatcattgcaggcagcccagtggaaacctccgctgct
ctacggcaactcacagaggacaagttgaaccagagcagagagccgtttttgaggaaccac
actgagcatgctcaaaaactggacaccctagccggagaactgcagactctggatctcaca
ttaatcattcaaaagctttgtggtaattcaccaacaagtcatgatacctgctggaattca
tcctgtgggggtctgggctgtccagactcagaagctaaggctaggtgtagtggagatgga
tgtggagtagcgactacagccaacgttgtcttggtaaagactcaagattctgaaagggaa
atcaccagtgccatggcagaagtagagaaactctcaaatatggtggcagaggtgaaggtg
caggctgatgaagcgaaacttagtgctcagaatgtcctgatgaagacgaataaaaccaaa
cagagagttgatcagagcaacgaggagctgagaaacctgataaaactgatcaaagatttt
ctcacacaggatgctgcagatctagaaagcattgaacttgtggcaaatgaggttctggcc
atggagctgccaacaactcccgctcagttgcagaacattactgatgagattcgacacaag
gttggacagctgggacatgtcgagactattcttcagcaaagttctgatgacatccagaaa
gcagaggctctgctggttcatgctcgccaagcaagtgaggacgccagtgatgtaaaagag
tccgtaaaaagagtaaagcaagctctggaagaagcccagagagctcagactgctgctagc
agtgcactacagcaggccaccgatgacgtacagactaccagaaacctcctttcctctgtg
gagttggaaactgcagatacagaacggcagctgcataatgccacacggagaatgcaaagg
cttgagcaagatctggtgcaagtgaaagaaaaagctgtgaatgttactctgagcagtgat
ttgaccaatcaggatgcttcaagcatagagaagattgcagaggagatcaaaaaggacctg
gagactgatgtaaagcaccagtacagcacagtggaacagctaataaataaaaaggccggc
ggcactggagacgctaagaagagggcagagacacttcagaagcaagccaaggaaatgctg
ctgcaggccagtgacaaactgcagctacttaaagatctggagaagtcatatgaggacaat
cagcagattctggaggtgaaagcagagcagcttgttgagttggaagaagctgtgaagaag
ctgttgcaggaaatcagccacaaggtcacggtttacagcacctgtttattgtag
DBGET
integrated database retrieval system
