Nothobranchius furzeri (turquoise killifish): 107389093
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Entry
107389093 CDS
T05163
Name
(RefSeq) laminin subunit beta-4-like
KO
K06245
laminin, beta 4
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107389093
04518 Integrin signaling
107389093
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107389093
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB4
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
107389093
NCBI-ProteinID:
XP_015820474
LinkDB
All DBs
Position
sgr13:complement(<35967994..36048331)
Genome browser
AA seq
1785 aa
AA seq
DB search
MTPLFLLVLISVVKSQDPRDLQDHEEQCIGSSCHPRVGDLMIGRAAQLSASSTCGLKGPQ
NYCIIGYLEGQEKCFTCDSRLPYHRNNPNSHHIENIISTSDHTGRRKWWQSENGVHQVSI
QLDLEAMFQFSHLVLTFKSFRPAAMLVEQSKDFGQSWKVIRYFAEDCAVHFPSVPDEPAW
NIDNVVCDSRYSSPEPSTGGEVVLKALDPVFEIENPNAPEIQNLITLTNIRVNFTRLFTL
GDTLLARRRRNPHVKYYYSLYNMVVQGRCFCNGHASRCVPEDRGRGDVFSQPDMVHGRCV
CQHNTAGKNCERCQEFYNDSPWKPGGQYTSNTCKRCNCHGHSDSCHFDADRYAATSGVSG
GVCDDCRHNKTGPQCELCRPFLYQNPQRAMDDPHACIPCDCDPAGSLGDGLCDASSGQCF
CKEHVEGQRCDRCKQGFFNLRQDSPTGCQECECHSLGSVGSCDQWTGSCECMPLASGPHC
DRCVAGFWGLGNSVFSCSPCECDIGGAHNHTCFPEDGQCHCLPNIVGQHCSDPAHGYFLP
SLNYFLYEAEHATPMTGGNSIPPRASSSVSPLENPALPPCEQYFKDQGFNFKISNGKVTL
VRRTHVNRLRRQHNMIPLEPGNALQIIPRQRLANKPEKWTGLGFVRVVDGAGLVFTVENL
PASMEYQLVIHYEPESPSDWLATVHIITLLPGDRGCSDNPAGTKALSLPGNSRLSILDSG
ICLNTGGRYIVEILFQKKTTVGSLHILVDSMGLIPRIDSVQDFCSQRVLDSYHRFDCIGL
AARPGSQDALPKVCEQLIKSLSARIHHGAIACRCNVIGSLRPACSKLGGFCECKPNVIGR
CCDTCAPLTFGFGPEGCTRCECDPRGSVSEMCDQVRGQCACRSQIKGRRCDQCQSGLWGF
PLCRLCDCNGLSEVCEELTGECVNCREHAAGPSCNRCEVGYYGNPVSGQSCQPCMCPDSL
SSGRFFATSCQQDLKSSSVMCFCWEGHTGAHCDQCSPGFYGNLTLPGAHCQPCPCNNNID
PDDRDACDSLTGKCLHCLHNTRGPQCQHCILGYYGNALQSDCKECSCDRRGTEVGHCHQG
RPCFCDPTTGQCPCRTRVAGVLCDECEDGSWDLSGALECQACRCDPANSISNICDKVTGQ
CPCHPGFGGRQCDKCGDSYFGNPDLQCLSCDCNLEGSEHPPCNPETGECLCRAGVAGISC
DECAPGYESEFPSCKKCHPCTSLWIQNVTNAQKAAQRMKTFISHHGNNQHPPGSHYWQQM
LAMYPKLDALANLTCLSLSKVENMEKLYLQIRKLKDAVDLTPILIDPSPLLHAEIVFLHL
EFNKLLPKLKDKLLQEPNKKEKQRLKESDAEAMDEIRQLHQVFIADEKRIRNSNKVTMDS
IDTRQEIKLKLSMCRNRGNLAALEQKVKELSEIKLNQKICGAPDLDDCSKCGGGHMCVGV
VPHTQKTSKMADNIKEQLAKLPSFLQKFMKKITNAQLLAEGFKDQTSDLQYQITNNSMSL
ETEKIKTKEIIQQIRDYLMDEMVPSEDIVKMAKAVWTIQLPPSLVEVRSAITDILNLNSN
ASKYQDHAKELETKTETVQELLKKAHQLKKWTENVDVEDISRDISATDGAHNKANGNLKA
ASQVRDQSKDQIQDTENKLEHIEKKLMIHSEDLWRGLESMKNKTESSRELAREAKETADS
AFNSANQTNLLDVMMQFELLKQKHLNRTLKVRAAEQLKEILNEAKDVQKQVEDGLQQVHD
VEQKIQQLLQRKKQKAVEVAELLEMAELLQQEIASRAEEYTICSS
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgactcccctatttcttttggttttgatttcagtagtaaaatcccaagaccccagggac
ctccaggatcacgaggaacagtgtattggcagctcctgtcacccccgggtgggtgacctg
atgattggtcgagcggcgcagctttcggcctcatcaacctgtggcctgaagggacctcag
aattactgcatcattggctatctggagggacaggagaaatgtttcacatgtgactctcgt
cttccataccatcgcaacaacccaaacagccaccatattgaaaacatcatcagtacttcc
gaccatacgggcagaaggaagtggtggcagtctgagaatggggttcaccaggtcagcatt
cagctggatctggaggccatgtttcagttcagtcacctggtgctaaccttcaagagtttc
aggcctgcagccatgttggtggagcagtcaaaagattttggacagagttggaaagtcatt
cgttactttgcagaagattgtgcagttcattttccttcagttcctgatgagccagcctgg
aacatcgataatgtggtctgtgacagcagatactcaagtccagagccctctactggtgga
gaggtagtgctgaaagcactggaccctgtctttgaaatagaaaacccaaatgcgccggaa
attcaaaatctaatcaccctgacgaatatacgagtaaacttcactcgtctcttcaccctt
ggtgacacactgctggcacgaaggcggaggaaccctcatgtaaaatattattactccctt
tacaacatggtggttcagggaagatgcttctgtaatggacatgcaagccgatgtgttcca
gaggacagaggacgtggggatgtcttctctcagcctgacatggttcatggccgatgtgtt
tgccagcacaacacagctggaaaaaactgtgagaggtgtcaagagttctacaatgactcc
ccctggaagcctggaggccaatacacatccaacacctgcaagaggtgtaactgtcacggt
cactctgactcgtgtcactttgatgcagatcgatatgcagcaaccagtggtgtgagcggt
ggtgtgtgtgacgactgccgccataacaagacggggcctcagtgtgaactatgtcgacct
tttctgtatcagaacccccagcgagctatggatgacccccatgcctgcataccgtgtgac
tgcgacccagctggctctcttggtgatggcctgtgtgatgcatcaagtggtcagtgtttc
tgcaaggaacatgtggaaggtcaacgttgtgatcgttgcaaacaagggttcttcaatctc
agacaagacagcccaactggttgtcaagagtgtgagtgtcacagtttaggaagtgttggg
tcatgtgatcaatggactggaagttgtgaatgcatgcctttggcgagtggtccacattgt
gatcgatgtgtggcaggcttctggggtttgggaaactccgtgtttagttgctcaccctgt
gaatgtgacattggtggagctcataaccatacttgttttccagaggatgggcaatgccat
tgtttacccaatattgttggtcagcactgctctgaccctgctcatgggtacttcctacca
tccctgaattacttcctgtatgaggcagagcatgcaactccaatgacaggaggaaactcc
attcctcctcgagcttcatcctccgtctctcctttggagaatccagctttacctccatgt
gagcagtattttaaagatcaaggttttaactttaagatctctaatggaaaagtgacgctg
gttcgaagaactcatgtcaatcgtctgaggcgacagcacaacatgattcctcttgagcca
ggcaatgctctgcagattattcctcgtcagaggttggctaataagcctgaaaagtggact
ggccttggatttgtaagagtggtggatggggcagggcttgtattcactgtggaaaacctg
ccagcatcgatggagtaccagctggtgatccattatgagccagagtctccttctgattgg
ctggctactgtgcacattatcacgctgttgccaggtgacagaggctgcagtgacaaccca
gcaggaactaaagcattaagtcttcctggaaactccagattaagtattctggactcaggg
atttgtctgaatacaggaggtcggtatattgtggaaattctttttcaaaaaaagacaaca
gttggcagtttacacatcctggtggactcgatggggctcatcccaaggattgattcagtt
caagatttctgctctcaaagagtccttgactcttaccatcgttttgactgcattggactt
gctgccagacctggttctcaggatgccctccctaaagtctgtgagcagctaatcaagagc
ctctcagcacggatccaccatggagccattgcttgcaggtgtaatgtcattggctctctc
agaccagcttgcagtaagctgggggggttctgtgaatgcaaacccaacgtgattggccgt
tgctgtgacacctgtgcaccgctgacttttggatttggacctgaaggctgtacacgatgt
gagtgcgatcctcgaggctcggtgtcagagatgtgtgatcaggtcagaggtcagtgtgca
tgtcgctcacagataaaaggcagacgctgtgatcagtgtcaaagtggactctggggattt
ccactgtgtcgactgtgtgactgtaacggactgtcagaggtgtgtgaagaactgacagga
gagtgtgtgaactgcagagagcacgctgctggaccgagctgcaacaggtgtgaggtgggt
tactatgggaatccagtctccggacaatcctgtcagccctgtatgtgtccagactctctt
agcagtggacgattctttgctacttcgtgtcaacaggatctaaagtcttccagtgtgatg
tgtttctgctgggagggccacacaggtgcacactgtgaccagtgcagccctggtttctat
ggcaatctgacgttacccggtgcccactgtcagccatgcccatgcaacaacaacattgac
ccagatgatcgagacgcctgtgacagtttgactggaaaatgtctgcactgccttcacaac
acaagggggccgcagtgccaacactgcatacttggttactatggcaacgccttgcagtca
gactgtaaagaatgctcctgtgacaggcgggggactgaggtgggtcattgtcatcagggg
cgcccctgtttctgtgatccaacaacgggacaatgtccctgcaggaccagggtagcggga
gttctctgtgatgaatgtgaggatggatcctgggatctaagtggagcgttggaatgtcag
gcctgtagatgtgatcctgcaaactctatctccaacatctgcgataaggtgacaggacag
tgtccctgtcatccagggtttggaggaagacagtgtgataaatgtggagatagttacttt
gggaatccagacctgcagtgtttgtcctgtgactgtaacctggaaggaagcgagcatcca
ccatgcaaccctgaaactggtgagtgtctttgtcgagcaggtgttgctggaatctcctgt
gacgagtgtgctccaggttacgagtccgagtttccatcctgcaaaaagtgtcatccatgc
acatctctgtggatccaaaatgtcaccaatgcccaaaaagctgcccagagaatgaagaca
tttatttctcaccatggcaacaaccaacatcccccaggcagtcattactggcaacaaatg
cttgcaatgtaccccaagttggacgctctcgccaacctgacatgtctctcgctgtcgaag
gtggaaaatatggagaaactttacttgcagatcaggaagctgaaagatgctgttgacttg
acaccgattctgattgacccgtctccactcctacatgctgagattgtttttttgcacttg
gagtttaacaagcttctaccaaagctgaaggataagctcctccaagagccaaacaaaaag
gaaaagcagcgattgaaagaatctgatgcagaggctatggatgagattcggcagcttcat
caagtttttatagctgatgaaaagaggattagaaactccaacaaggtcacgatggattcc
atagacaccagacaggaaatcaaactcaaactgagcatgtgcagaaacaggggaaacctc
gcagctttggagcagaaggtcaaagagctcagtgagatcaaactaaaccaaaagatctgt
ggagctccagatctggatgactgttcaaaatgtggtggaggtcatatgtgtgttggagtt
gttccccatactcaaaaaacttccaagatggcggacaacataaaggagcaactcgccaaa
ctaccgtcatttctgcagaaattcatgaaaaagatcactaatgctcagctgttggctgag
ggcttcaaagaccaaaccagcgacttgcagtaccagatcactaacaacagcatgtccttg
gaaacagagaagatcaaaaccaaggaaataatccagcaaatcagagattacctcatggat
gaaatggtaccctcagaggacattgtgaaaatggccaaagctgtttggaccatccagttg
ccaccgtcattagttgaggttcgctcagcaatcactgacatcctgaatctgaacagcaat
gcttccaaataccaggatcatgcgaaggagcttgagacaaaaactgagactgtgcaggag
ctgctgaagaaagcccatcaactcaagaaatggactgaaaatgtagatgtcgaagatatc
agcagagacatttctgccactgacggagctcacaacaaagccaacggcaacctgaaggca
gcaagtcaagtcagagaccaatccaaagaccaaatccaagatactgaaaacaaattagag
cacattgagaagaagctgatgattcactctgaagatctgtggagaggacttgaatctatg
aaaaataaaactgagagcagtagagagctggccagagaggccaaggagactgcagactca
gcttttaacagtgccaatcaaacgaatctgctggatgtcatgatgcagtttgagctttta
aagcagaagcacttaaatcgtacactgaaagtccgagcagcagaacagttgaaggaaatc
ttaaatgaggccaaagatgttcagaaacaagtggaggatggacttcaacaggtgcatgat
gtggagcagaaaattcagcagttgctgcagaggaagaaacaaaaagctgttgaagtggca
gaactgctggagatggcggagttgctgcaacaggaaattgcctctcgcgctgaagaatac
accatctgttcctcgtaa
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integrated database retrieval system
