Nothobranchius furzeri (turquoise killifish): 107389110
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Entry
107389110 CDS
T05163
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107389110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfu03021
]
107389110
03036 Chromosome and associated proteins [BR:
nfu03036
]
107389110
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107389110
Coactivators
SAGA/TFTC/STAGA complex
107389110
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
107389110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
DUF5677
Motif
Other DBs
NCBI-GeneID:
107389110
NCBI-ProteinID:
XP_015820545
UniProt:
A0A9D2YST5
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All DBs
Position
sgr13:36414949..36428724
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AA seq
920 aa
AA seq
DB search
MAGASDPLEDVLSDEVDQKAVSDLVGSLESQLGDRKTPAGSYTDENRDAAAAAAEHFSGK
VFDQVGSAEQPQQGHPNAGSTREPVPGQALPPSSSPGLAGAVNALGTILPAAGVPLRPGP
VTLSPQLPATASFHRTPVLGPSAAPSVAETIRTSSPGLQGLNGSTGAGKLASSPGGVSAG
SAAVIGSIVTQPGVPAPQSPVTTAAQNGLEPKAAPCPSASQVLNHSNPLMHTKGLVAGQP
PSGSSVILTSTPPPAPSQSPIIQVQTGTSTPPAGVKPAINGVVQPAVAVVRSPLVPVEGA
ASIQQQRPGLVASATRATAPQPGLAVRPQQQATIQLPPGTVLFRTETGQLLVLPQQLLAQ
AKMQQGQTAVTQRPAASMAAPTIRVSTATTAPGTPPTVRLASPPPTRMVQSPSTPPVQAL
TVPSTTGTMSVKMGTPQKTSTVITAGGSPVTKPTPLANTAAPPPAATPITRVTVVSQEMQ
ENVKKCKNFLATLIKLTPQNSTSPETSKNVKALVQDLLDAKIEPEEFTSRLQAELKSSPQ
PCLVPFLKKSLPALRQTLLNSQQSSATAPPITSATPAATTTTTIIRPQLPGSAVRLAPPI
TNAAAVVAGRPGVQPIQTHSPVVISQPFRHQASLLRGPAAIAGKSSAHLAAQANQKKLND
PGGGTFRDDDDINDVASMAGVNLNEENARILATSSELVGTKIQSCKDEYFLPPVLLHRRI
LDTAKRLGVTEVPLDVVNLVSHAAESRLRSLLEKVSIIAQHRSDGGKDEERYEQTSDVRS
QLRFFEQLERMEKQRKDEQEREILLKAAKSRARQEDPEQVRLKQKAKEMQQQELAQMRQR
DANLTALAAIGPRKKRKMDSGDAVTGGGEVASGSGSCVTQSPRQQLRQRITRVNLRDFIF
CLEQDRSSARSLTLYKALLK
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccgctggaggacgtgctctcagacgaggtggaccagaaggcg
gtcagcgacctcgtcgggtctctggagtcgcagttgggcgacagaaaaactcccgccggt
tcttacacggacgagaaccgagacgcagcagcggccgctgccgaacatttctcagggaaa
gtcttcgaccaagtggggtccgcggagcagccgcaacaagggcatccgaacgcggggtcg
acccgggagcccgttcctggccaagctctccctccatcctcatctccggggctcgccggt
gccgttaacgcattgggaaccatcttaccggcggcgggcgttccgctcagacctggaccc
gtaactttaagcccacagctccccgccaccgctagcttccaccggactcctgttctgggt
ccaagcgcggctcccagcgtcgcggagacgatccgtacctcgtcccccggattacagggc
ttgaacggcagcaccggagctggaaagttagcgagctcacccggtggggtcagcgcgggg
agcgccgctgtcatcgggtccatagtcacacaacctggtgttcctgcgccccagtccccg
gtgactacagcggctcagaacgggctagagcccaaagctgcaccctgcccgtctgcctct
caggtcctgaaccacagcaaccctctgatgcacactaaggggctggtggccggccagccc
ccctccgggagctctgtgatcctgaccagcacaccccctcctgctccatcccagtctccc
atcattcaggtccagactgggaccagcacacctccagctggagtcaagcctgctatcaac
ggggtggtgcagcctgctgtggctgtggtgagatcgcccctggtccctgtggagggagct
gcctccatccagcagcagagaccaggactggtggccagtgcgacccgagcaaccgccccc
cagcccgggctggcggtccggcctcagcagcaggccaccatccagctgcctccaggtacg
gttctattccggacagagacgggtcagctgttagtgctcccacagcagttactggctcag
gccaagatgcagcagggccaaactgctgtcactcaaagaccagctgcatcaatggccgcg
cccaccatccgtgtcagcacggcgaccacggcgcctggaacccctccaactgtccgtctg
gcgtccccccccccaacacgaatggttcagtctccctccacccccccggtccaggcgctg
acggttccctcaaccactggaaccatgtctgtgaagatggggactcctcagaagacgtcc
acagtgataacagcgggggggtcacctgtcacaaagcccacccccttggccaacactgcc
gcaccccctcctgcagccacgcccatcaccagagtcactgtggtgtcgcaggaaatgcag
gaaaacgtgaaaaagtgtaagaacttcctggccacgctcatcaagctgacaccccaaaat
tccacctccccggaaacatccaagaatgtgaaggccctggtccaggacctgcttgatgca
aagattgagcctgaggagttcacgtctcggctgcaggctgagctgaagtcctccccacag
ccctgcctcgtccccttcttgaagaaaagcctccctgcgctgcgccagactctgctcaac
agccaacagtcttcggccaccgctcctcccatcacctcagctacccctgcagccaccacc
accaccaccatcatcaggccacagctgcctggcagcgccgtccgcctggctccgcccatc
acaaacgcagcagctgtggttgctggcagaccaggagtccaaccgattcagactcactcg
cctgtcgtcatcagtcagccgttcagacatcaagcttcactcctacgaggaccagccgct
atagctggcaagagttctgcccacctggctgctcaggccaatcagaaaaaactcaacgac
cctgggggcgggacctttagagatgatgatgacatcaacgacgtggcgtccatggctggc
gttaacctgaatgaggagaatgctcgtatcttagcaaccagctccgagcttgtcggaacc
aagatacaatcctgtaaagatgaatacttcctgcccccagtcctcctgcaccgccgcatt
ctggacacggctaagaggctcggggtcactgaggttccgctggatgtggtgaacctggtc
tcgcacgccgctgagtccagactgcgctcgctgctagaaaaggtttccatcatcgcccag
caccgctcagacggaggaaaggatgaggagcggtacgagcagacgtcagacgtgcgttcc
cagctgaggttcttcgagcaactggagcggatggaaaaacagaggaaagacgagcaggag
agggagattctgctgaaggctgctaagagccgggcccgacaggaagatccggagcaggtt
cggctcaaacagaaggctaaagagatgcagcagcaggaactggctcagatgagacagagg
gacgcgaaccttactgcgctcgccgccattggacctcgaaagaaacgcaagatggattcg
ggagatgccgtcacaggtggaggggaggtggcttctggttctggttcctgtgtgacccag
tccccccgtcagcagctccgtcagcggatcaccagagtgaacctcagggatttcatcttc
tgtctggagcaggaccgcagctcggctcggtctctgacgctctacaaggccctgctgaag
tga
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