Nothobranchius furzeri (turquoise killifish): 107389130
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Entry
107389130 CDS
T05163
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107389130 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nfu04812
]
107389130 (nedd1)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
107389130 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
107389130 (nedd1)
Cytoskeleton proteins [BR:
nfu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
107389130 (nedd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
EIF3I
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_NWD2_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_LRRK2
KNTC1_N
PQQ_2
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
107389130
NCBI-ProteinID:
XP_015820585
UniProt:
A0A1A8AD28
LinkDB
All DBs
Position
sgr13:36910264..36919695
Genome browser
AA seq
642 aa
AA seq
DB search
MEEATCLVSTGDCVKIWDAVSMAPLEQFNPHSSSHPVAQACWSSNNQYLVSASSSGDKLV
VSGLKSSPVPVVELADGKQQTRVCLSSSSQFLVSGGLDHCVHIWDLKSKRLHRSLRDHKE
EVTCVSFNANDSCVASGSTSGDLVLHSLTTNLSSRAFGHGPNQPIHDLRMSPVKRSLLGS
VSDSGTVVLWDANTQKELHTFDGSHKAPGSGLVFSPTSELLVVSVGLDKKIIFYDTASRI
VLRSIRVDSPLTSVDFSLDGTGLVVGSTQGKVYHYDLRNSSTPTKVTLAHKTSVTCLRFQ
SNTSRHKSGKLGPSKVSSTKRSSSKLSGSHTDSTPSSGPASHRQVSITAGGAAVEGVSRE
AEGQPTQTFSSVGRNSLDIFSPVREGSDSGNQGKTGETLTGRTNVTREGEGQPLIGRGSL
DIFSPVREDPGTGPQRRTPLGNQLAASAGWSYSPSVFQSPLPIKEEEPTTAGAVEPCDPK
SQADLSSGSGLDGEPQTLPTSSQQTNQNQPAPHFTPEASLRRTNGVQTQPCYSSPVHIAP
PTVAGPSVTLSQNVVGVAGQGGAAPFSALQVHFIQNMIHETLEEFRNSCHQDIINLQVEM
IRQFYIQLTEIHGLIEKHSVNESLVEEIERLREENRRLRANF
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggccacatgtctggtgtccaccggagactgcgtgaagatctgggatgctgtt
tccatggcaccactggagcagtttaacccacacagcagcagccatcctgtcgctcaggcc
tgctggagctccaacaaccagtaccttgtgagtgccagcagcagcggagacaaactggtg
gtttctggactgaagtccagtcccgtcccggtggtggagctggccgatgggaaacaacag
acccgagtgtgtctgagctcttcatctcagtttctggtcagcggcggtctggatcattgt
gtccacatctgggacctaaagtccaagaggcttcaccgctccctcagggaccataaggag
gaggtgacctgtgtgtcgtttaacgccaacgacagctgcgtcgcttctggatccaccagc
ggggatctggtcctccacagtctgaccaccaacctgtccagtagagcgttcggccacgga
cccaaccagcccatccatgacctgcggatgtccccagtgaagcgctctctgctgggcagt
gtctctgacagcggtacggtggttctgtgggacgccaacacccagaaggagctgcacacg
ttcgatggctcccacaaggctcccgggtcaggtctggtcttctcccccaccagtgaactg
ctggttgtcagcgtcggcctcgacaagaagatcatcttctacgacacggccagcaggata
gttctaaggtccatccgggtggacagtcctctgacctcggtggacttctcgttggatggt
accggtctggtggttggttctactcaggggaaggtctaccactacgacctgaggaactcc
agcacccccaccaaggtcaccttagcccacaagacctccgtgacttgcctgcgcttccag
agcaacaccagcagacacaagtccggcaaactgggtccctctaaggtctccagtacaaaa
aggtccagctccaagctgtccggcagccacacagactccacccccagctcaggccccgcc
tcccacagacaggtgtcaattacagcagggggcgctgctgtggagggcgtgagtcgggag
gccgaaggtcagcccacacagacgttcagcagcgtgggacggaacagtctggacatcttc
tctccagttcgagaaggttctgactcggggaaccaggggaagaccggagagaccctaact
ggacgaacgaacgtaaccagagaaggagagggtcagccactgattggtcggggcagtctg
gacatcttctccccggtccgagaagacccaggaaccgggccacagcgtagaacccccctg
gggaaccagctggcggcttcagcggggtggagctacagcccgtcggtcttccagtccccg
ctgccaatcaaagaggaggagccaaccactgctggagcagtggaaccatgtgaccccaag
agtcaggctgacctgagcagcggctccggtttggacggggaacctcagactctgcccaca
tcatcccaacagaccaatcagaatcagccagccccacacttcactccagaggccagcctc
cgcaggaccaatggcgttcagactcaaccatgctatagctcacctgtccacattgctccg
cccactgtagcaggtccatctgtgacactgtcccagaatgtggtgggcgtggctggacaa
ggaggggctgctccattctccgccctgcaggtccacttcatccagaacatgatccatgag
actctggaggagttcaggaactcgtgccaccaggacatcatcaacctgcaggtggagatg
atccgacagttctacatccagctgacggagatccacggtctgatagagaaacattcggtt
aacgagtctctggtggaggagatcgagaggcttcgggaggagaaccggcgcctgcgagcg
aacttctga
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