Nothobranchius furzeri (turquoise killifish): 107389150
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Entry
107389150 CDS
T05163
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107389150 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107389150 (exosc6)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107389150 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107389150
NCBI-ProteinID:
XP_015820632
UniProt:
A0A1A8UUL1
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Position
sgr13:38304599..38306408
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AA seq
272 aa
AA seq
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MPTDTKRVRGPDVSQSPVLLGYKPAAVLASRGPREDGRQRDQVDVRPVFVRCGLVSQAKG
SAYIEAGNTKLISCVYGPRETDRKDETDMKSGRLTTDVRFAPFSCPERVPWIQGSQDKDL
SLMLHESLQPAVCLQRYPRSQIDVSVMVLENSGSALAHAVTCASLALADAGIEMYDLVLG
CSLQQVGSSYVVDPSYLEENGWRCNSSESRGGLTVAFLPSLNQISGLQSDGEMSEETLTA
GVRTCIEGCYKLYPVIQKVLTKAVRRAAPPST
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccgacagatacgaagcgggttcgtggtccggacgtttctcagagccccgtgctgctc
gggtacaaacccgctgcggttctagcctcgcgtgggccccgagaagacggtcggcagcgg
gaccaagttgacgtccggccggtcttcgtccgctgcggcctggtgagtcaagctaaaggt
tccgcttacatcgaagctggaaacacgaagctgatcagctgcgtttacggaccccgagaa
accgatcggaaagacgagaccgatatgaaaagtgggaggctgaccactgatgtgcgtttc
gcccctttttcctgcccagagagggtcccgtggatccagggcagccaggacaaggacctg
tctctgatgctgcacgagagcctgcagccggccgtgtgcctccagagatacccgcgctct
cagatcgacgtcagcgtgatggttctggagaacagcggctcagccctggcccacgccgtc
acctgtgcctccctcgcgctcgcggatgcggggattgagatgtacgacttggtgctcgga
tgttccctccagcaggttgggagctcctacgtggtcgacccgtcctacctggaggagaac
ggctggaggtgtaacagcagcgagagccggggcgggctcacagtggccttcctgcccagt
ctgaaccagatttctgggctgcagtccgacggtgagatgtctgaggagaccctgactgcg
ggggttcggacctgcatcgaaggatgctacaaactttacccggttatccaaaaggtcttg
accaaagcggtccgccgggcggcgcccccgtctacctga
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