Nothobranchius furzeri (turquoise killifish): 107389179
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Entry
107389179 CDS
T05163
Symbol
nlrc5
Name
(RefSeq) protein NLRC5 isoform X1
KO
K22615
NLR family CARD domain containing 5
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nfu04054
]
107389179 (nlrc5)
Pattern recognition receptors [BR:
nfu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
107389179 (nlrc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_At5g56370
Atypical_Card
NOD2_WH
Motif
Other DBs
NCBI-GeneID:
107389179
NCBI-ProteinID:
XP_015820674
UniProt:
A0A9D2YQQ7
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All DBs
Position
sgr13:complement(39114545..39150670)
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AA seq
1844 aa
AA seq
DB search
MDEEELDDENVKCVLVQESSKLFQILCSQSPSVIMSLCQMLPHEAGRHDEQASTGSAAAS
VDHVNALLQYFRGASAAECRNFLQSVCVMCENMPMHLESRLLSVAGYASSENSTPSVTNQ
EPSSLQLEEQLTKRPRIDYWELYIKAATDFHQRRWKNVSEGLVKDVQLEKVWVGLRAANR
GRERPDRTPGSADRGGRTPELGLDYGCLESRLTLESFLQGCAGKVMLLCGPAGSGRTLLM
SCLGQQWADGLGPIPSSTLFVLLEFCQLNLLSSPVSLSDLLFQHCLPPPLNDDVKQAVVD
YLLSNPGQSCWVLDGYDEFRWKFHRQTEPLDVEEPLPVTDLLSGLLNRQLLPGSTVLVTC
RVRDVSDFDGLPDKVGELLPWDQQEIREYVDGYFGIRDGSLQTEAADLLLSNHHLLTMSS
IPAFCNICCMVLEFLLLASKNTDRAQTPEGGKRGGSCTKREEEGSAGESEISPGLPEVPT
TRTQVYLAVVAAFLSRHPHTRGRNDQTRTSRFPESCLRELSRYSFKLCELSRLAWESLEK
SKILFMKEDIPGNILAFSVRTGLLRQVELRRGDGKLVSAYSFVHQTVQEFLAALRIMTSE
DLTIKQLKKRFSLKTRWITKSDQKSVFTDSLYLFVCGLASSRCTEALVLFARESRSKGVQ
SWVQKRQTCIVDLLKTQCPGTLTGPKILQLCHCVQESQDQDLARQVVSARPTLELRNFCL
WPNDIHALAFVVNSAADSGAGLDFGSCSMDLECLDVLSWCRNIHDLSFRRRKYGDKFAEK
LSTVLPEFRTLRKFEFCGASLTAAGAASLASGLQECATITEINFSDNNLQDEGIRHVAEI
FPKLQNLLSVTLGRNNASLKAAQCLVEKMTFCLNVQQVHADGNKELTVTFLQSSDVNSRK
TNPERAVSLLNQKWNKPDMQKFAKSLTKCPPLSVLNLSGGQWDEETLKTLTQFVPKLTIT
EKITLNGSCTSVEGLVVLTALLSECPSVSDLQIRLQNPVEASVGFAEGKPGSEMSKTLSL
SCCNLLPKDLERVLKSLGTSPDLAVLDLSSNRLGDKGLKKLLDVLSHFKKVQRVNVSENG
VSMDGAVLLAAALCSSYTLCNVHISDGGKGQVLLQLRPNSSDNKHPTKAFRMKSSSVLPP
DVTKICKRLTRCRSGLELEFSKCTFGEKAIGNLLKVLPDMSTLQRLDVSSSVTMVTEALS
LIRCLTDNQRVTCVEFSPQTESFIMFDGVKAEEVKCRLTGFCFRDVASLKRLLEILQQDQ
LISYLDLSDNQLEDEGVKFLIDSLPKLQISSCINLSYNRLSRQGLMGVATTLSTCPDVSD
VETSLGEEKRCLIWFRRQDESGKSLRISNGSLERDHLISLAEIVSRCPSLTRLVLKNNTL
QWEWIETFIRVLTCSQRGLTVSVEESWIGSEEAVSLAHRCLQLNKNISTLRIHQTGLQLS
LMNSELTSLRSEAAIPAQSATAIVSLGDRIQLPLVEGFTHQFPQLTELDFSTDRLGVEFL
SSLLPSLPNLTSLSVGIKERTPAVVEELSQILLQMTLIQRLNLSGHSISDAAAQSLTELF
PRLRSIGLSCCVWSEDGGLQLIRALRRSKHLEELCLDAALQLKENSWECLAEALGNMTSI
QSLKLDGWRMDDGGIQQLIKIIPGWKRLKKISLSKNVISDASGEKLLDALKSCSLLEELH
LSSNFLGDLTAASMSLVLPSMTRLAVLDVSVNRFGKDGSVSLAKAVRSLTNLRKIHLTSV
GTSELGVVAASLGKCPFIQDVGLGWNHCGDDVVLELAKILPLCRDLIRLDLECNSVSSAG
LAVLVKALQSCPSLQIIRLWKNNVSVSEAQRFSQTERRLSFSSM
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaggagcttgatgatgaaaatgtgaagtgtgttctggttcaggagtcctct
aaactatttcagatcctctgcagtcagtctccatcagttatcatgtctctttgccaaatg
ctgccccatgaagcgggccgccatgatgagcaggcatccaccggttctgctgcagcttca
gtggaccatgtcaacgccctgctgcagtacttcagaggggccagcgctgcagaatgcaga
aacttccttcagagcgtttgtgtgatgtgtgagaacatgcccatgcatctggagtccagg
ctgctgtctgtggcaggatatgcgagcagtgaaaattcgactcccagcgtaacgaatcag
gagccatcatctctgcagttggaggagcagctcactaaacgcccacggatcgattactgg
gagctgtacatcaaagcagccacagattttcatcagaggaggtggaagaacgtgtctgaa
ggtctagtgaaggatgtgcagctggaaaaggtctgggtcggcctcagagctgcaaacagg
ggcagggagcgacccgatcggacccccggatctgcagaccgagggggcagaacaccagag
cttggcttggattacgggtgtttggagtccagactgactttggagtccttcctgcaggga
tgtgcaggaaaagtgatgcttctttgtggaccggctggatcaggaagaacgctgcttatg
tcctgtcttgggcagcagtgggctgatggattaggccccatcccttcatccaccctgttt
gtcctgttagagttttgtcagctcaacctgctgtcgtcccccgtgtccctgtcagatctg
ctcttccagcactgtctcccccctcctctgaacgacgacgtaaagcaagccgtcgtggac
tacctcctttctaatccaggtcaaagctgttgggttctggacggctacgacgagtttcgc
tggaagttccacagacaaacggagcctctggacgtagaggaacctctacctgtcacggac
ctcctctcagggttgttgaatcgtcagcttctcccaggaagcacagtgttggtgacctgt
cgtgtgcgagatgtgtccgattttgatggattaccagacaaagtgggggagctgctgcca
tgggaccagcaggagataagagaatatgtggatggatactttggtattagagatggaagt
cttcaaacagaggcagcagatctcctcctctctaatcatcacctcctcaccatgtcctcc
atccctgccttctgcaacatttgctgcatggtcctggagtttttgctgctggcaagcaaa
aatacagacagagcacaaactccagaaggaggcaaaaggggaggaagttgcacaaagaga
gaggaagaaggatctgcaggagaatcagagatttcacctggattacctgaagtccccaca
actcgaacccaagtctacctcgctgttgttgctgctttcctgagccgacatcctcacaca
agaggaagaaacgaccagacaaggacctcgagatttcctgagagctgtctgcgtgaactg
agtcggtattcatttaagttgtgtgagctgagtcggctggcatgggaaagtttggagaag
agtaagatcctgtttatgaaagaagacattccagggaatattttagcgttttcagtccgg
accggactcctccgacaggtagagctcagacgcggcgacgggaagctcgtcagcgcctac
agcttcgtccaccagacggttcaggagtttctggctgctctgagaattatgacgagtgaa
gacctcactattaagcagctcaagaagagattcagcctgaaaactcgttggataactaaa
tcagaccagaagtcggtgtttaccgactcgctgtacctgtttgtgtgtggtttggcgtcc
tcacgctgcactgaggccctggttctgtttgccagggagtcccgttcaaagggcgtccag
agctgggtccagaaacgccaaacctgcatcgtggatttactgaaaactcagtgtcctggc
actctaacgggaccgaagattttgcagctttgccactgtgtccaggagagccaggaccag
gacctggcccggcaggttgtgagtgcgaggccgaccctggagctgaggaacttctgcctg
tggcccaacgatatccatgctttggcttttgtagtcaactcagcagctgacagcggcgcc
ggtctggactttggttcatgttcgatggacctggagtgtctggatgtcctgtcctggtgt
cggaacattcatgacctcagttttcggagacgcaaatatggtgataaatttgcagagaag
ctgtcaaccgttctgcctgaattcagaactctgaggaaatttgagttttgtggtgccagt
ttgacagctgcaggggcagcgagtctggcctcgggtctgcaggaatgtgccaccatcact
gagatcaactttagcgacaacaatctgcaggacgaaggaatcagacatgtagctgagatt
ttccctaaactacaaaacctgctttccgtaacgttgggacgtaacaacgcgtctctgaaa
gcagcccagtgtctcgttgagaaaatgacgttttgtttgaacgttcaacaagttcacgca
gatgggaacaaagagctgactgtaacgtttcttcagagctcagacgtaaacagccgtaaa
acgaatcctgaacgagcagtcagcttgctgaatcagaagtggaacaagcctgacatgcaa
aagtttgccaagtctctgactaaatgtcctcctctgtctgtcctgaacctgtcgggaggt
cagtgggatgaggaaactttaaagacgctgactcagtttgtgccaaagctcaccatcact
gagaagatcaccttgaacggcagctgcacatcggtggagggtctggtggttctgaccgct
ctgctgtccgagtgtccctcagtgtccgatctgcaaatcagactccagaacccagtcgag
gcatcagttgggtttgctgaaggcaaacctggaagtgaaatgtctaaaacactcagcctc
agctgctgtaatctgctgcccaaagatctggaaagagtcttgaaaagtttaggaacttcg
cccgacctcgctgttctggacctgagctcaaatcgtttaggcgacaaaggtctgaagaag
ctgctggatgttctgtctcattttaaaaaagtccagagagtcaatgtgagtgagaacggc
gtcagcatggacggggcggttctcctggctgctgctttgtgctccagttacactttgtgc
aacgttcacatcagtgatggaggtaaaggtcaggtgctcctgcagctccggcccaactcc
agtgacaacaaacatccgacaaaggcgttcagaatgaagagcagcagcgtcctcccgcct
gatgtcaccaaaatatgtaaacgactgacccggtgtcgctctggtttggagttggagttc
tctaaatgcacttttggcgagaaggcgatcgggaatctgctgaaagtcttaccagatatg
tcgactctgcagagactcgatgtcagcagcagcgtcaccatggtgactgaagcattgtca
ttaatccgctgcttgactgataatcagagagtcacctgtgtggagttcagtccacagact
gaatccttcattatgtttgatggagttaaagcagaagaagtcaaatgcaggttaacaggt
ttttgtttcagagacgttgcttcactgaagcgcctgctggagatcctgcagcaagatcag
ctgatttcttaccttgatttatcagataatcagctggaagacgaaggagtgaagttctta
atcgattctttaccaaaacttcaaatcagcagctgcatcaatctgagttacaacagactg
agccggcaggggctgatgggcgtggccacgacactttctacctgccctgacgtttccgat
gtggaaaccagtttgggagaagagaagcgatgtctcatctggttcagacgacaggatgaa
agtgggaaaagtctcagaatcagcaacggcagcttggagcgagatcatctgatcagctta
gcagagatcgtctcccgctgtcccagtttgaccagactggtattaaagaacaacacgctg
cagtgggagtggatagaaaccttcataagagttttaacctgcagtcagagaggattgaca
gtcagtgttgaagagagttggattggttctgaagaagctgtgagtttagcgcatcgctgc
ctgcagctgaataaaaacatctcaactctcaggatccatcaaaccggccttcagctgtct
ctgatgaactctgaactcacctcactcaggagtgaagcagcaattccagctcagtcagcg
accgcaatcgtgagcctcggggacagaatccagcttccattagtagaaggtttcacccat
cagtttccacaactcacagagttggacttttccacagacagacttggagttgagttcctg
tcctctctgctgccttcgttaccgaatctcacctctctcagcgttggaatcaaggaacgt
actccggctgtagttgaggagctctcacagatcctgctgcagatgacattaatccaacga
ctaaatctttcaggtcattctataagtgatgcagctgctcagagtctgacggaactgttt
cctcgtcttcgctcaatcggcctgtcttgttgtgtgtggtcagaagatggaggactgcag
ctcatcagagctctgagacgatccaaacatttagaagaactttgtctggatgcagctctg
cagctgaaagagaacagctgggagtgtttggctgaagctttaggaaacatgacttccatc
cagagtctgaagttggacggctggaggatggatgatggagggatacaacagctgattaaa
atcattcctggatggaagcggctcaagaagatcagcctctctaagaatgtcatcagcgac
gcttcgggggagaagctgcttgatgctctgaagagctgcagcctcctggaggagctccat
ctgtccagtaacttcctgggtgacctgaccgctgccagcatgagcctggtgctgccgtcg
atgacgcgcctcgctgtgctggatgtttcagtcaatcgttttggaaaagacggatcagtc
agcctggccaaagcagtcaggagcttaacgaacctcagaaagatccatctgacttctgtc
gggacgtcagaactcggcgttgtagcggcgagtttgggcaaatgcccgttcatccaggat
gtgggtctgggatggaatcactgcggagacgatgttgttctggagctcgccaagattctg
cctctttgccgggatctgatccgtctcgacttggagtgcaacagcgtgagttctgctgga
ctggcggttctggttaaagccttgcagtcctgcccgtctctgcagatcatcaggctgtgg
aagaacaacgtctcagtgagcgaagctcagaggttcagccagacggagaggaggctcagt
ttctcctccatgtga
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