Nothobranchius furzeri (turquoise killifish): 107389311
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Entry
107389311 CDS
T05163
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107389311 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107389311 (nup93)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107389311 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
107389311
NCBI-ProteinID:
XP_015820869
UniProt:
A0A1A8AZH9
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Position
sgr13:43323934..43352756
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AA seq
821 aa
AA seq
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MDAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGTRGLDVFHISQRLETLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRHR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDLEPSFVSEVTAPGRSALDS
VEVAYGRQIYCFNEKIVNGHIQPNLGDLLAAAAESLDDKNVSELWLMVKQMTDVLLVPAK
DTLKSRTSVEMQMAFVRQALSFLENRYKHHTMGTVFGNLHQAQLGGVPGTYQLVRSFLNI
KLPGPLPGMQDGEIEGHPVWAVVYYCLRCGDLNAAMQVVSKVHHQLGDFKTWFQEYMNSP
DKRLSPTSENKLRLHYRRALRNCADPYKRAVYCLIGKCDVSDNHGEVADKTEDYLWLKLN
QVCFDDDGSSSSPQDRLTLAQLQKQLLEDYGESHFSASQHPFLYFQVLFLTAQFEAAVAF
LFCVERLRSHAVHIALVLYELRLLLKSSGQSAQLLSQEPGDPPMIRRLNFIRLLMLYTRK
FESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGKLEKDGSRKPGVI
DKFAGDTRAIISKVALEAENKGLFEEAVRLYELAKNPDKVLELMNRLLSPVIAQVSAPQS
NKERLKNTAVAIAERYRSQGVAAEKTVNSTFYLLLDLMTFFDEYHTGHVDRAYNVMERLK
LLPLSQDGVEERVAAFRNFSDEVRHNLSEVLLATMNILYTQYKRLKAAPAGTPARSQRAI
EDKGMQLHSQARALITFAGMIPYNMAGDTNARLVQMELLMN
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagaagggtttggagagcttttgcagcaggcagaacaattggctgcagaaaca
gaagctgtgtctgaactgccacatgtggaaaggaaccttcaggagatccagcaggctggg
gaaaggcttcgatcccgcaccttaactcgcacctctcaagatgctgcagatgtgaaagcg
tccatcctccttggtaccagaggtttagacgtcttccacatttcacagagactggaaact
ctaagtgctgccaccacctttgagcccctggaaccagtcaaggacactgacatacagggc
ttcttgaagaacgagagggacaacgccctcctgtccgccatcgaagagtctcgtcacagg
acgttcctgttggctgaagagtaccatcgtgagtccatgctggttcagtgggagcaggtg
aagcagagagttctgcacactctactaggagctggagaagatgctctggacttcagccaa
gatctggagccgagcttcgtgagtgaagtgacagctccagggaggagtgcactagatagt
gtggaggtggcttatggacggcagatctattgttttaacgagaagattgtaaatggacac
attcagcctaatctgggggatttgttagctgcagcggcagaaagtctggatgacaagaac
gtctcagagctgtggcttatggtgaagcagatgacagatgtgcttctggttccagccaaa
gacaccctcaagagtcgcacttcagttgagatgcagatggccttcgtgcgtcaggcgctc
agcttcctggagaacagatataaacaccacacgatgggaacggtctttgggaatctccac
caggcccaactgggaggtgtgcctggaacataccagctggtccgcagcttcctcaacatc
aagctgccggggccccttcctggcatgcaggatggtgagatagagggccacccagtgtgg
gctgtggtctactactgcctgcgctgtggagatctgaacgcagccatgcaggtggtgagc
aaagtgcaccaccagctgggagactttaagacctggtttcaggagtacatgaacagcccc
gacaaacgcctctccccgacttcagagaacaagcttcgtcttcactaccgcagagcgctg
aggaactgtgccgacccgtacaagagagccgtctactgcctcatcgggaaatgtgacgtc
agtgataaccatggagaggtggcagataaaacagaagactacctctggcttaagttgaac
caggtgtgttttgatgatgacggcagcagcagctctcctcaggaccgactcactctggca
cagttacagaagcagctgctggaagactacggagagtcccacttctccgcgagccagcat
cccttcctgtacttccaggtgttgttcctgacagcgcagtttgaggcggccgtggcgttc
ctgttctgtgtggagagacttcgtagtcacgccgtgcacatcgccctggttctgtacgag
ctgcggctgctgctgaagtcgtctggtcaaagcgctcagctgttgagccaggagccaggt
gaccctccgatgatccgacgcctcaactttatccgtctgctgatgctgtacactcgcaag
tttgagtccacggatccaagggaagcgctgcagtacttctacttcctacgcaatgaaaaa
gacagccagggagaaaacatgttcatgcgttgtgtcagtgaacttgttattgagagtcgt
gagtttgacatgctgttaggaaaactagagaaggacggcagcaggaagcctggcgtcata
gataagtttgcaggcgacacccgagcgatcattagcaaagtggctctcgaagcagagaac
aaaggcttgtttgaggaggcggtcagactctacgagctggccaagaacccagataaggtg
ctggagctgatgaacaggctgctgagtccagtcatcgcccaggtcagcgcacctcagtcc
aacaaagagaggctgaaaaacacagccgtggctatagctgaaaggtatcgttcacaggga
gtagcagctgagaagacggttaacagcaccttctacctgcttttggacctgatgacgttc
tttgatgagtaccacacaggtcacgtggacagagcctacaacgtcatggagcgcttaaag
ctgcttcctctcagtcaggacggcgtggaggagcgagtcgctgcttttaggaacttcagc
gatgaggtgcgtcacaacctgtctgaggtgctgctggccaccatgaacatcctctacacc
cagtacaaacgcctgaaggcggcgccggcgggcacaccggcacgatcccaaagggccatc
gaagacaaagggatgcagctgcacagccaagccagagccctgatcaccttcgctggtatg
attccctacaacatggctggagacaccaatgcaagactggttcagatggaattactgatg
aactga
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