Nothobranchius furzeri (turquoise killifish): 107389346
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Entry
107389346 CDS
T05163
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107389346 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107389346 (herc3)
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107389346 (herc3)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
HECT type E3
107389346 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Beta-prop_TEP1_2nd
EKLF_TAD1
Motif
Other DBs
NCBI-GeneID:
107389346
NCBI-ProteinID:
XP_015820934
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All DBs
Position
sgr02:13964132..14002083
Genome browser
AA seq
1047 aa
AA seq
DB search
MLCWGNARDGQLGIGVERHPVFEPRNCHVFSRRGLIEVACGGQHTLFLLHDGSVYTCGFN
GCRQLGHNKDGSFPELVGALDTQKITMVSCGWAHSMAVNEQGQVFAWGAGDRGQLGLGTA
ENAVRIPRLVKRLCDHSISQVMCGNQHCIALSRDGQLFTWGQNTNGQLGLGKGEPSKLSP
HPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHVKFLRS
QKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNNELLPRRVLELMGTEVSQVAC
GRHHTLALVPSSSMVYAFGCNSQGQLGTGILGDARSPFPIKTSFLSGNLQRETKQYMVIK
IICGGDHSFLLYSNEQNSINPVDFRVINISKSLSPINYERLNSWRLKLMYNTDSSVANDI
VIQLSSAACWNASFLDQSDDTHFKTNPKIPGIDLNSVRVLFECLSKPAFSGLLEQASTSF
ESLLIPQLPRSPPDVEAMRIYLILSEYPALQDSKNYIRLTIPLAMAILRLDTNPSKVLDN
WWCFVDGNVFTRMVDTYKSIVVFMLTGGKTLLVPVFYDNYFLATLQLLEKLHKVNLKANH
VEYSHFYIPDVTSLVDIQEDYLKWFLSKAEIKVGSSPSQSDFPSVNLCAFPFILNAQAKT
TMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRNHLVSDTLRELTMYT
DVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTHYKDSNLLWFSDTCFV
EQNWFHLIGVICGLAIYNSTVVDLHFPLALYKKLLDVLPKLEDFKELSPTEARSLQELLD
YEGEDVEEIFLLNFSITRENYGMVEVKELVPGGESIAVDKNNRKEFVEAYLRYVFTDSVS
EQYSAFSSGFLKVCGGEILALFQPSELMAMVVGNNNYNWEEMEKNAVYKGEFSATHPTVR
LFWEVFHEFSLEKKKQFLLFLTGSDRIPIHGMESLRIVIQSTTAEEHYLPVAHTCYNLLD
MPRYQTKEILRRRLTQAVEQYEGFSLV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaacgccagggatgggcagttgggtatcggcgtggagaggcacccc
gtgttcgagccgaggaactgccacgtgttcagtaggcgagggctgatagaggtcgcgtgc
ggaggccagcacacactgttcctgctgcacgatggaagcgtgtacacatgcggctttaac
ggctgcaggcagctgggccacaataaagatgggtctttcccagagctggtgggtgctctg
gacactcagaagataacgatggtgtcgtgtggttgggcccattccatggcggtaaacgag
cagggccaggtgtttgcgtggggagccggtgacaggggacagctgggcctgggaacagca
gagaacgccgtccgaatcccaaggttggtgaaaagactctgtgatcacagcatctctcaa
gtgatgtgtgggaaccagcactgcatcgcactttctcgagatggccagctcttcacatgg
ggtcagaacaccaacggtcagctcggtctggggaaaggagagcccagcaaactgtctcct
catcctctgaagtctctggcaggaatccctctggcccagatcaccgctggaggagaccac
agctttgctctgtccttgtctggggctgtattcggctggggcaagaacagagccgggcag
ctcggcctcaacgacaagcaagatcgagctgttccatgtcacgtcaaattcttgagatcc
cagaaggttgtttacatcagctgtggagatgaacacacagcagccctcacaaaagatgga
ggtctgtttacgtttggcgacgggtcgtggggccagctaggtcacggatcgaccaataac
gagctcttaccgagacgagtgttggagctcatgggtactgaggtgtcacaggtggcctgc
ggcaggcaccacactctggcgttagtgccctcctccagcatggtgtatgcgtttggttgt
aatagtcaaggccagctggggacaggaatactgggagatgcgaggagcccatttcccatc
aaaacaagcttcctgagtggaaatctgcagcgagaaacaaagcagtacatggtgataaag
atcatctgtggaggagaccacagtttcctattatactccaatgagcagaattctatcaac
ccggtggacttcagagtgatcaacatcagtaaaagtttgtctcccatcaactatgagagg
ttaaactcctggaggttaaagctgatgtacaacacagactccagtgttgcaaatgatatt
gtaatccaactctcctctgcagcttgttggaacgccagcttcttggaccaaagtgacgat
actcacttcaaaaccaaccccaaaattccaggcattgacttgaactctgtcagagttctg
tttgagtgtctcagcaaaccggccttttctggactcctggaacaggccagcacgagcttt
gagagtctgttgattccccagctgccccgctcccctcctgacgttgaggccatgaggatc
tacctcatcctgtccgagtaccccgccctgcaggactccaagaactacatccgtctcacc
attcctctggcgatggcaattctccgactagacaccaaccccagcaaagtattggataac
tggtggtgttttgtggatggcaatgtgttcaccagaatggtggacacgtacaagagcatt
gttgtgtttatgctcacaggaggcaagacgctcttggtacctgtattctacgacaattat
tttttggccacactgcagctgctggagaaactccataaggtgaacctgaaggccaaccat
gtggagtacagccatttttatatccctgatgtcaccagcctggtggacatccaggaagac
tacctcaaatggtttctgagtaaagccgagattaaagttggatcatctccttcacagagt
gactttccctccgtaaacctctgtgcctttccgttcatcttgaacgctcaagccaagact
acaatgctgcaaacagatgctgaactgcaaatgcagatggcagtgagtggtgcaaacttg
cacaatgtctttatgctgctcacactggaaccccaccttgctagaaacccctacctggtg
ctccatgtgcgtaggaaccatttagtaagtgacaccctacgtgagctcaccatgtacact
gatgtggacctcaagaagccactcaaggtgatatttgatggcgaggaggctgtagatgca
ggtggagtgactaaagagttcttcctgctgctgttaaaagagctgatggatcctgtttat
gggatgttcactcattataaagactccaacctgctgtggttctcagacacttgttttgta
gagcagaactggttccacctgattggggtcatctgtggtctggccatctataactccact
gtggtggacctgcacttccctctcgctctctacaagaaacttctagatgttttgcccaaa
ctggaagactttaaggagctctcgccgacagaggccaggagtcttcaggagcttttggac
tatgaaggggaagatgtggaagaaatatttcttcttaacttttctatcactagggagaat
tatgggatggtagaagtcaaggagctggttcctggaggagaaagcatcgccgtggacaaa
aacaacaggaaggagtttgtggaggcctacctgcgctacgtgttcacggactctgtgtcc
gagcagtactctgccttctcctccggtttcctgaaggtgtgcgggggggagattctggcg
ctgttccagccctctgagctgatggccatggtggttggcaacaacaattataactgggag
gagatggagaagaacgctgtttacaaaggagagttctcagcgactcacccaacagtcaga
ttgttctgggaggttttccacgaattttccttggaaaagaagaagcagttcttactgttc
ctcaccggcagtgaccgtatccccatccatggaatggagagcttgcgtatcgtcatccag
tccaccacggccgaggagcattacctgccggtggcccacacctgctacaacctcctggac
atgccccgctaccagaccaaagagatcctgcgtcgccgtctgactcaggccgtggagcaa
tacgagggcttcagcctggtctga
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