Nothobranchius furzeri (turquoise killifish): 107389368
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Entry
107389368 CDS
T05163
Name
(RefSeq) obscurin-like protein 1 isoform X1
KO
K19574
obscurin-like protein 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107389368
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
107389368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_5
Ig_4
Ig_6
C2-set_2
Izumo-Ig
C1-set
VEGFR-1-like_Ig-like
Ig_C17orf99
fn3
Motif
Other DBs
NCBI-GeneID:
107389368
NCBI-ProteinID:
XP_015820965
UniProt:
A0A9D3BM42
LinkDB
All DBs
Position
sgr14:226811..274703
Genome browser
AA seq
3089 aa
AA seq
DB search
MDVFGGAPRFLAYPRPVIVQSGTEAVLKCQIGGDPRPAVIWEQNNEKIDPQGRYRVFEDG
NVYNLIISAVTIEDSGQYICKAKNSIGETYAAATLKVEGEAQEMELREEKKPRFLIKPLS
TRVGRGEDAAFSCKLWGSPRPEVVWEKDGRKLNEIFESTHFNVGYQDGGWFQLKIFKTRA
PDGGVYTCKARNEFGEALAGAVLLVDAGPGHEEEGNRNGYTNGHWKIQQGKPRTGRQAPN
RLKDESMTKSTKVKIFAVTEGKHAKFRCFVTGKPKPEIIWRKDGRLILSGRRYLLYEDRE
GYFTLKVLYCKQKDNGVYVCAASNTAGQTLSAVHLSVKEPPVRFKQPLYDLEVWERDLAV
LECEVPEDSVPITWYLEDRRLQPGAKYGMEEWGTKRRLTIRDIGVDDDGIYLCEMPDGGR
SIAEVAVKGTILRKLPRKVDVLEGENAAFCVEVEKEEMDIHWYKDGTELRETHQTILKSF
GRTHILVFVNTMPQDSGLVTFLVGRSKTSSQLRVKSARHCPPSCPLGVQINTEHANAALL
SWTPAPDSRKNPPSGYVLERQEVGTGSQEWLQCLTTDSATSVEILGDSVPCEADYRFRIC
SVNKYGKSNNVEFPRTVHLVPVARIQAPLQDALVPEGQDALFSIELSASVIGTWFLNGTQ
LQEDEHYSMRRSRTHQSLRIRGVRDTDNGAEITFIAYGIRDSAALYIQAPLVKFLPLSEM
DRNKFVEVGNPIVLYCEISDPATPVHWYKNGVELQTMDGLHIQAEGTMRRIVIQSADFSH
SGVYCCDAIDDVIRFNVEVEAPPVRFSTLPDAERNKTILTGCPIVLQCELSDPFAQVHWY
KDGSKLHPQGGVDIITDGYERKLNVHSAEVAHSGLYCCKTKGDSITFSVDVKAPPMKFSL
IPEDMKMKLIEAGCPVVLQCVVCDPEGQVCWYKDDVRLISNTELELHSEGNTRTLIIESA
EPCHSGLYRCATRDDTVEFQVTIKASTTSPSAEVVEMRSLGETGLSEPASETSDPVFQAS
QPKESESCSSKEFDFEMEDINKTLVVEPTHPSNSGAYYCATADDVAKLIVENQVTPPTHK
LEPDEKNKSAEANCQIVQQFEISDPIAKACWYKDGTPIYPELEGDSIEQNQIVPLQPEVL
SGDGRFSCDALNDTPLPVDVKAGQCHCRHEIDAVADASAQYTVDVKASPTPPVRITALHE
RNKSVEVGGPLVLQCELSDPNAQATWLKDGIKLLEASGLNVLAEGPVRMLAFQSVMLAHA
GTYSCRTTDDAVQFHLDVKAPLTFSAVSEADQRKTVIAGSPIALRCELSDPSGQVSWFKD
GTKLLPENGVAIQSQGSLRSLVVPSAKQTHTGVYRCESKDDDIQFSVEVKELPVKFSELQ
ENDRNKSIQEGTPLVLSCELSHDLSTHVDWYKDGAKLLPQNNLEIQSDGLMRTLIIPLTG
SKHSGIYECSTSDDTITFKVDIKGQSPKITADPRSGTYKIVRTGFPVILQCQVSDPAAQV
SWVKDKIELFSKTGLDMKRDGHLRKLLIQSAKVSDSGLYCCSLAEEVVAFQVYVEATPVR
FSVLPEVARNKFVESGSPIKLQCEVSETNAQVCWRKDGEQLLLASEYEIHTNEKLRALVV
TSAEVRHSGLYCCESADDRIQFKVDVGAVPASERNCSVEANSMTKPQCENSDTTTRSCRC
DDGIKLVPESMQVTSDRIMKTRVEESTSYSGVFDCKADGDSDFSDFFQEEKAPPVIFAEV
PEKDLFHSAVEQEQLVLSCEVSRPDGVVLWYKDGAEIQSNNKVTIQATGTERTLTIHSSQ
LSDTGTYTCRAGDNILIFKVNIREPPVTIVHPKEDVHLDRHVPEEIILSCELSRANGVVS
WFKDGQKLQECENIKLKIEGPYRRLKILSSRVEDSGEYVCDSADDSIFFHLSITEPPVQI
ISPSQSQMELCQQTSERMVLSCEISRPNAVVRWYRDGLEVEENDTLILEGDGVYRRLIIP
ETTVKDSAEYVCDTGDDSVTFFVNIAEPPVRFIRPRKVASCIEKVVGETLVLDCEVSRPN
AEITWKKNGEEVEDSRNTTFLEDGIMRQLTIHSLTVEDSGQYICDAKDDVMHFNVKVQEL
PVKILGKTEAKTERHFFVSDDIILVCELSRSNASVNWYKDNQLIDDTKQYCCEEQGVFRS
LVVLNAGFEDSGVYTCDAVDDKLVFHITVKEPLVKIIGNSGNPEHHVLAAGDDLILECEV
SQPNATVKWLRNGELLTSDPRIKIESHDVMRKFVLSGLRPSDSGEYMCDASDDKLITIVK
VQDSPAKFINKHSQNNISAYENESVTLCATVTHERANVRWLKDGQLLDRDNIHISSEAET
HKLTINPLQLSDSGEYVCDIGTDEMFFSLLVKEMKIKFIRRLENVASLKGKSLTLQCEVN
KPKGDVQWLKDGKEIMPGHWCTIRAQGRERSFTVHQLTDEDAGDYACESTDDRTSATVTV
ETPRVVEFIAELRNITVCEGEDAVFKCVVSPADVKLVWRLNDKQVGLKERSVTSNHGLCH
MLCINNCLVSDGGRVTADAEGLISEAELQVQEQQVLFTKKMVPVVAEEYSEATLEVEVSR
EAEEVQWMRQGVLIHPGAKYTLKHKGQKHSLTIHKLVTSDRGTYSCETLHDRTQAQLSVE
PRRITIRKGLSDIKTTERETASFEVELSHPNVPGTWNRNGIQLKPTNHFRMSAKGQVHSL
TISNLSVEDTGTFVFSVENLKTSARLVVKEPPVTIFRKLESQKVPDVSIISLECELSRHN
VDVRWMKDGFELKPSRDLRIHAMGRKRFLQIMKCRVTDSGTYTCDAGDASTTCTVEVYER
ELLVLQGLEDLDIQEDQNAVFVCEVSVEDIPGEWYKNGQRIQPTSTVKIRQEGKKHFLLM
CNVHAEDSGEVKFVARNVESAAYLDVEELPMNIVKPLQDKAALERSRVILDCTVSNPRCS
IRWYKGCNVILPSERFEISSEGCYRKLIIQQVALEDEGTYSVQVGEYTCSAKLTVEAQSV
LMLRELRDVEVVAPDDACFECEVSDLVLRSPVWSLNGEPLQSGPRVRLEKTGTVHRLTLR
QTSPNMSGEVAFTSGKATSRAQLRVTSDH
NT seq
9270 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtttggtggtgctccacgtttcttagcttatccaagacctgtcatagtgcaa
agtgggactgaggccgtcctaaagtgtcaaataggaggagacccaaggccagccgtcatc
tgggagcaaaacaatgaaaagattgaccctcaaggacgatatagggtctttgaagatgga
aatgtttacaatcttatcatttctgcagtaactattgaagatagtggacaatacatatgc
aaagcaaagaacagtatcggggaaacatatgcagcagccactctgaaggttgaaggtgag
gcacaagaaatggagctaagggaggaaaaaaagccacgattcctgatcaagcccctttct
actcgagtcggtcgtggggaagatgctgccttctcctgtaagctttggggaagcccaaga
ccggaggttgtctgggaaaaagatggtagaaaactcaacgaaatatttgagagtacacat
tttaatgtgggctaccaggatggtggatggtttcagctcaaaatcttcaagacccgagct
ccagacgggggtgtatatacatgcaaagctaggaatgagtttggggaagcgctggcagga
gctgtgttgctagttgatgcaggtccaggacatgaagaagaaggaaatcgcaacggctac
acaaatggtcactggaaaatccagcagggtaaaccgaggactggtagacaagcgccaaat
cgactcaaagacgagagcatgaccaagtcaactaaagtaaaaatatttgctgttactgaa
ggcaaacatgccaaattccgctgctttgtgactggtaaaccaaaaccagaaataatctgg
aggaaagatgggagactcatactgtctggaaggcgttacttgttatacgaggacagagag
gggtacttcacactaaaggtcctgtattgtaagcaaaaggataatggagtttatgtctgt
gctgcatcaaacactgcagggcaaacccttagcgctgtgcacctttccgtcaaggagcca
cctgtacgatttaagcagcctctctatgatctagaagtttgggaacgagacttagctgtc
cttgaatgtgaagttcctgaagactctgttccaattacatggtatctggaggatagacga
ctgcagccaggggccaaatatggaatggaggaatggggaacaaaacggcggctaacgatc
cgtgacattggggttgatgatgatggaatttacctctgtgagatgcccgatgggggtaga
agcatagcagaggtagctgtaaaaggtacaattttgcgaaaacttccacggaaggtggat
gtcttggaaggtgaaaatgctgcattttgtgttgaagtggaaaaagaagaaatggacata
cattggtacaaggatggcacagagttgcgcgaaacccaccagacgatcctgaagtctttt
ggtcgaactcacattttggtgttcgtcaatacaatgccccaagactccggccttgtgact
tttctggtgggcagatccaagacctcctcccagttaagagtgaaatcggccagacattgt
cctcccagttgtccgctgggagtgcagatcaacacagagcacgctaatgctgctctgctc
tcatggactccggcaccggactcacgaaagaaccctccatctggatatgtgcttgaacga
caagaagtgggcactggttctcaggagtggctgcagtgcctgaccacagactctgccact
tcggttgagatcctcggtgacagtgtcccgtgtgaggcagattatcgctttcgcatttgc
agtgtgaacaaatacggaaaaagcaacaatgttgaatttccaagaactgttcacctagtt
cctgtggctagaatacaagctccattacaagatgccttggtgccagaagggcaagatgca
ctattctcaattgaactttctgcttcagttattggtacgtggttcttgaatgggactcag
cttcaagaggatgagcattattccatgcgtcggtcaagaacccaccagtctcttcgcatt
agaggagtacgggacacggataacggagctgagattacatttattgcatatggcattcgg
gattctgcagcactgtacattcaagctccacttgtgaagtttctaccactgtctgaaatg
gatcgaaacaagtttgtagaagttgggaacccaattgtactctactgtgagatctctgac
cctgcaactccagtgcattggtacaagaatggggtagaactacaaacaatggatggtctt
catatccaggcagagggtacaatgagacgaattgtcatccaatcagcagacttctcacat
tcaggagtgtactgctgcgatgctattgatgatgtcatcaggttcaatgtggaggtagaa
gccccaccagtgaggttttcaacacttccagatgcagaaaggaacaaaaccatcctaact
ggctgcccaattgttttacaatgtgagctgtcagacccctttgcccaggtgcactggtac
aaagacgggtcaaagctccatcctcaaggtggagtagatatcataactgacggctatgag
aggaaactgaatgtccattcagcagaagttgcccactctggcttgtattgctgcaagaca
aagggtgactccatcacattcagtgtggatgtcaaagctccacctatgaagttctcactt
attcctgaagatatgaagatgaagttgattgaagccggctgccctgtagtacttcagtgt
gtggtgtgtgaccctgaaggccaggtttgctggtacaaggatgacgtgcggctcatatct
aacactgaattagaactccactcagagggcaacaccaggactttaattattgagtctgca
gaaccgtgccactctggtttgtacagatgcgccacacgggatgatacagtggaatttcaa
gtgacgatcaaagcttcaacaacgtcgccctcagcagaagttgtggagatgcggtcactc
ggagaaaccggcctatccgaaccagccagtgaaacctcagaccctgttttccaagcgtca
cagccgaaagaatctgaatcatgttcaagcaaagaatttgattttgaaatggaagacatc
aacaagacccttgtcgttgaaccaacgcatccttcaaactctggcgcatactattgtgca
acagcagatgatgttgccaaattaatagtagaaaatcaagtaaccccaccaacacacaag
cttgaacccgatgagaagaacaagtcagctgaagcaaactgccaaattgttcagcagttt
gagatttcagatcctattgcaaaagcttgctggtacaaagacggaactccaatatatccc
gaattggaaggtgacagcatagagcagaaccaaatcgtgcccctccagccagaagtctta
tctggtgatggcaggtttagctgtgatgcactgaacgatacaccattacctgtggatgta
aaagccggacagtgtcactgtcgtcatgagattgatgcggtagctgatgcatctgcccaa
tacactgtggatgtcaaagcatccccaactccacctgtgagaattacagctcttcatgag
aggaacaagtcagttgaagttggtggacccttagttctgcaatgtgagctatcagaccca
aatgctcaagcaacctggctcaaggatggaattaaacttcttgaagcgtctgggctaaat
gtgctggcagaaggccctgtaaggatgctcgcattccagtcagtgatgctggctcacgca
gggacgtacagctgtaggacaacagacgacgcagtgcagtttcatcttgatgtcaaagct
cctctgacattttcagcagtatctgaggctgaccagagaaagacagtgatagctggctct
cccatagctctgcggtgtgagctgtcagaccccagtggacaagtcagttggttcaaagat
ggaacaaagcttctgccagaaaatggagtagccatccagtcacaggggagtctgagaagt
ttggtcgtgccttcagccaagcaaactcacactggtgtgtacaggtgtgagtcaaaggat
gatgacatccaattctcagtggaagtcaaagaactgcctgtgaagttctcggagcttcaa
gagaatgacaggaacaagtccattcaggaagggactcctcttgtcctcagctgtgagctc
tctcatgatctttcaactcatgttgattggtataaggatggagccaaactcctgcctcag
aacaacttggagatacagtcagatggcctgatgaggaccttgatcatccccttgactggg
agcaaacattctggtatctacgaatgttcgacatcagatgacaccatcacttttaaggtg
gacataaaaggccaatcaccaaagatcacagcagacccacgctcaggaacatacaagatt
gttaggactggttttccagtaatcctgcagtgtcaggtctcagaccctgctgcccaggtt
tcctgggttaaagataaaattgaacttttttcaaaaacgggccttgatatgaaaagagat
ggccacctcagaaagttactaattcagtcggctaaggtttctgattctggcctttactgc
tgtagccttgcagaggaagttgtggcctttcaagtctacgttgaagctactcctgtgagg
ttctcagttctaccagaagtcgcaagaaacaaatttgtggaatcaggctccccgattaag
ctgcagtgcgaagtctcagagacaaatgcacaagtctgttggcgtaaagatggagaacag
ttgttactggcaagcgaatatgaaatccacacaaatgaaaagctgagggcgctggttgtt
acatcagcagaagtcaggcactctgggttgtactgctgtgagagcgcagacgaccgtata
caattcaaggtggatgttggagctgttccagcatctgagaggaactgctctgtcgaagca
aacagcatgaccaaaccgcagtgtgagaactcagacaccacaacccgatcctgccggtgt
gatgatgggataaaacttgtgccagaatcaatgcaggtcacatcagacagaattatgaag
acacgggtcgaggagtcaacttcatactctggagtgtttgactgtaaagctgatggtgat
tcagatttcagcgatttctttcaggaagagaaagctccaccggtgatatttgctgaagtc
ccagaaaaagatctttttcacagcgctgtggaacaagagcagcttgttttgtcatgtgaa
gtctcgaggcctgatggtgttgtcctgtggtacaaagacggagccgaaatacaatcgaac
aataaggttacaatacaagcaacaggaactgaaagaactctgactatacattcatcccag
ctgtctgatacaggcacatacacgtgccgtgctggagacaacattttaatcttcaaggtt
aacataagagagccccctgtgacgatagtccaccccaaagaggacgtccacctcgaccgc
cacgttccagaggaaattattttgagctgtgaattatctcgtgctaatggtgttgtcagc
tggttcaaagatggccagaagcttcaagagtgtgaaaacatcaagctcaagattgaaggc
ccttatcggcggcttaagattctttcaagtagagttgaggactccggagaatacgtctgt
gactcggctgacgattctatattctttcacctcagtatcacagaacctccggtgcagatt
atttccccgagtcagtctcaaatggaactgtgccagcagacctctgaaagaatggtgctg
agttgtgagatctcacggcctaatgcagtggttcggtggtaccgagatgggcttgaggtg
gaagagaatgacacccttattcttgagggggatggcgtctacagacgactcattatacct
gaaacaaccgtcaaagattccgcagaatatgtatgtgacacaggggacgattctgtcacc
ttttttgtgaacatagcagaacctcctgttcgatttatacgtccacggaaagtggctagt
tgtatagagaaagtggttggtgagactctggttctagactgtgaagtttcaagacctaat
gctgaaatcacctggaagaaaaatggagaagaagtggaagactctagaaataccactttc
cttgaggatggaatcatgcgtcagttaaccattcactctttaacagtggaggacagcggg
caatacatctgtgatgcgaaagatgatgtaatgcatttcaacgtgaaagtacaagagttg
ccggtaaaaattcttgggaaaactgaggcaaaaacagaaaggcatttttttgtgtcagat
gatatcattttagtgtgtgaactctcaagatccaacgcctcagtcaactggtacaaagac
aatcagcttattgatgacactaagcagtactgttgtgaggaacaaggcgttttccgatca
ctggttgttctaaatgctggatttgaagactcaggggtgtatacctgcgatgctgttgac
gacaagttggtttttcacattaccgtcaaagagcctcttgtgaaaatcattggaaattca
ggcaatccagaacatcatgtactagcagcaggagatgacctcattctggaatgtgaagtt
tctcaaccaaatgcaacggttaagtggctacggaatggcgagttactcacatcagatccc
cggataaaaatcgaaagtcatgatgtaatgaggaagtttgttctctctggacttcggcct
tcagattcaggagaatacatgtgtgatgcgtctgatgacaagttgattacaattgtgaaa
gtgcaagactcaccagccaagttcatcaataaacattcccaaaataacatctcagcctat
gaaaatgagagtgtcacattgtgtgccacagtaacccatgaaagagctaacgttcggtgg
ctgaaagacggccagctgttggatagggacaacattcatatctccagtgaggctgaaacc
cataagctcaccattaatcctctgcagctgtcagattctggcgaatatgtctgtgacata
ggcacggatgaaatgtttttcagccttttagtaaaagaaatgaaaatcaaattcattaga
cgtctggagaacgtggcatctctgaagggcaaaagcctaacattacagtgtgaggtcaac
aagccaaaaggagacgtccagtggttaaaagatggcaaagagataatgccaggtcattgg
tgcacaatacgagcacaaggcagagagagaagctttaccgtccaccaactaacagatgaa
gatgctggagattatgcctgtgaatctacagatgacaggacctcagccactgtcactgtg
gaaaccccccgtgttgtcgagttcatagcggagctccgtaatatcaccgtctgtgaaggg
gaagatgccgtttttaagtgcgttgtatcaccagcagatgttaagttggtttggcgcttg
aatgacaagcaagttggtctaaaagagcgctctgtcacttccaaccacgggctgtgccat
atgctctgcatcaacaactgcttggtttcggatggcggcagggtaacagctgatgcggag
gggttgatatcagaggcagagctccaggttcaagagcaacaggtgctgttcaccaagaaa
atggtaccagttgtagctgaagagtacagcgaggcaactcttgaggtggaggtgagtcga
gaggcagaggaggtgcagtggatgagacagggggtgctgatccacccgggtgccaagtac
accctgaagcacaagggtcaaaagcacagtctcaccatccacaagctggtcacgtctgac
cggggtacctacagctgcgagaccctccatgaccggacgcaggcccagctctcagtggaa
cctcgaagaatcaccatcaggaaagggcttagtgacattaaaaccacagagagagaaact
gcctcctttgaagtggagctctcccatcccaacgttcctggcacctggaacagaaatgga
atccagcttaagccgacgaatcacttccgtatgagcgccaaaggacaagttcacagcctc
accatctctaacttatccgtggaagacactgggacctttgttttcagtgtggagaacctg
aaaacatctgcaaggcttgttgttaaagaacctccggtgactatttttcgaaaattggaa
agccagaaagttcccgatgtgtcaataatctccctagagtgtgaactgtcgaggcacaac
gtggatgtgagatggatgaaggatggatttgagctgaaaccaagcagagacttgcgtatt
catgcgatggggaggaaacgattccttcagataatgaaatgccgcgtcaccgactcaggc
acgtacacctgtgatgcaggagatgcctccacgacctgcacggtggaggtttatgaacgt
gaactgctggtccttcagggactcgaagacctggacatccaggaagatcagaacgctgtt
tttgtctgtgaggtctctgtagaggacattccaggggaatggtacaaaaacgggcagcgg
atacaacccaccagcactgtcaagatccgccaggaaggcaaaaaacattttcttctcatg
tgcaacgtgcatgcagaggactccggagaggtcaagtttgtggccagaaatgttgagtct
gctgcttatttggatgtggaagaacttcctatgaacatagtgaagcctctgcaggataag
gcagcccttgagaggagccgcgtcatcctggactgcacggtgtctaatcccaggtgtagc
atccgctggtacaaaggctgcaatgtcatcctgccctctgaacgctttgagatcagcagt
gagggctgttaccgtaaactgatcattcagcaggtggcgctggaggacgagggcacatac
agtgtgcaggttggagagtacacatgctctgcaaaactcacagtggaggcccagtcggtt
ttgatgttgcgagagctcagagatgtggaagtcgttgcccctgatgacgcctgcttcgaa
tgtgaggtctcagacctcgtcctgagatccccggtgtggagtctgaacggggagcccctg
cagtcaggtccccgggtccgactggagaagacgggtacggtccacaggctgaccctgcgg
caaaccagcccgaacatgagcggcgaggtggcgttcacgtctgggaaagcaacgagtaga
gctcagcttcgagtaaccagtgatcactga
DBGET
integrated database retrieval system
