Nothobranchius furzeri (turquoise killifish): 107389472
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Entry
107389472 CDS
T05163
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107389472
03036 Chromosome and associated proteins [BR:
nfu03036
]
107389472
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107389472
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107389472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
Zf-C2H2_ZNF451_C
zf-C2H2_REST
zf-C2H2_jaz
zf-C2H2_ZNF142_18
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
zf-met
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
107389472
NCBI-ProteinID:
XP_015821093
UniProt:
A0A8C6LP21
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All DBs
Position
sgr14:complement(4875503..4897047)
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AA seq
820 aa
AA seq
DB search
MNGESADDGGVVDVPTIQAVHGHDAMVVDLLQHVADAGGVMQGQAGVTLTQGHVVGMVAS
QSQEELIEARVGVGVEGGAGVEMMVIDSLDPTLMQMKTEVINTDVGASTTTVGVVGGVAH
QAAVTTVDQAQIITLQLVNMEEQAALGLGELQLVQVPVSASAVETLQQGTFVDTSAMPKD
GDPVICHTLPLPEGFQVVKVGANGEVETVEQEKGADGHDEEEEEEEEEEEEVGNQILDEA
EDEPVQPLNDDPSWAKDPDYQPPSVGVRKTKKGKKSRLRYAEGDKDMDVSVYDFEEEQQE
GLLSEVNAEKVVGTMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPH
KCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCS
MCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHA
RFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDA
VFHERYALIQHQKSHKNEKRFRCDLCDYCCRQERHMVMHRRTHTGEKPYACSQCEKTFRQ
KQLLDMHFKRYHDPNFVPVAFVCSKCSKTFTRRNTMARHAENCNGEVDEAENGGPTPKKG
ARGRKRKMRNRKDEEDSEEDYFEQDEDEGENNAELLQEEEEANSLELEQAPNVVPVPPPD
EPPVKRKRGRPPKNPKPWTSSKAVKPAAEAATSAIDIIQVESESAEAMTEDVLKVEVGEG
GAETPVEQEVDQTVEEVEEIAAAAADNDLTPVMILSMMDR
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggagtcagcagatgatggcggggtggtggacgtcccgaccattcaggccgtc
cacggccacgatgccatggtggtggacctccttcagcacgttgccgatgctggcggtgtg
atgcagggacaagctggagtcacgctcacacaaggccacgtggtgggaatggtagccagc
caatcacaggaggagctgatagaagctcgggtgggggttggtgtagaaggcggagccgga
gttgagatgatggtgattgactcactggatccgactctgatgcagatgaagacggaagta
ataaacactgatgtgggggcctccaccactacagtgggtgtggtcgggggtgtcgctcat
caagctgctgtcacaacagtggaccaggcccaaatcatcaccctccagctggtaaacatg
gaggaacaagcagccttgggcctgggggaactccagctggtccaggtgcctgtgtcggcc
tctgccgtggaaaccctgcagcaaggcacattcgtggacacttctgccatgccgaaggac
ggagatccagtcatctgtcacacgctgcctctccccgagggcttccaggtggtgaaggtt
ggagctaatggggaggtggagacagtagagcaggagaagggagcagacggccatgatgaa
gaagaggaggaggaggaggaagaggaggaggaggtgggaaaccagatcctggacgaagca
gaagatgagcctgttcagcctttgaatgatgacccaagctgggctaaagacccagactat
cagcctccctctgtgggggtcagaaagaccaagaagggtaagaagagtcgtctgcgttat
gctgaaggcgacaaggacatggatgtcagtgtctatgattttgaggaggagcagcaggaa
ggcctcctgtcagaggtgaatgcagagaaagtagtcggcaccatgaagcctcccaaaccc
accaagatcaagaagaaaggggtgaagaaaaccttccagtgtgagctgtgtagctacacc
tgccctcggcgctccaacctggaccgacacatgaagagccacaccgatgagaggccgcac
aaatgccacctgtgtggacgagccttcaggaccgtgactctgctgcgaaaccatctcaac
actcacacagggactcgcccacacaagtgcacagactgtgacatggcttttgtgaccagt
ggagaactggttcgccatcggcgctacaaacacactcatgagaagcccttcaagtgctcc
atgtgtgactacgccagtgtggaggtgagcaagctgaagcgtcacatccgttcccacacg
ggcgaacggcccttccagtgcagcctctgtagctacgccagcagagacacatacaagctg
aagagacacatgaggacgcactcaggagaaaaaccctacgagtgctacatctgccacgcc
cgcttcacccagagtggaactatgaagatgcacattctgcagaaacacacagaaaatgtg
gccaaattccactgtcctcactgtgacacagtcatcgcacgcaagagcgacctgggcgtg
catcttcggaagcagcattccttcatagagacgggaaagaagtgccgttactgcgatgct
gtgtttcatgaacgttacgctctgatccaacaccagaagtcccataaaaatgagaaacgc
ttcaggtgtgatttgtgtgactactgttgccgccaggagcgccacatggtgatgcaccgt
cgcacccacactggagagaaaccgtacgcctgcagccagtgtgagaagaccttcagacag
aagcagctcctggacatgcacttcaaacgctaccacgaccccaactttgtccccgtggct
tttgtttgctccaagtgcagcaagaccttcacacgcaggaacaccatggctcgccacgct
gagaactgtaacggcgaggtggatgaggccgagaacggaggtcccaccccaaagaaagga
gcgcgaggaagaaagaggaagatgaggaacaggaaagacgaggaggatagtgaggaggat
tactttgagcaggacgaagatgagggtgagaataatgctgaacttctgcaagaggaggaa
gaagcaaacagcctagaactagaacaagctcctaatgttgtcccggtaccacctcctgat
gagcctccagtcaagaggaaacgaggcagacccccaaagaaccccaaaccttggacttcc
agcaaggctgtgaaaccagcggccgaagcagcaacttcagctattgacatcatccaggtg
gagagtgagagtgctgaggcaatgacagaggacgtgttgaaggtggaggtgggtgaagga
ggagcggagactcctgtggagcaggaggtggaccagactgtggaggaggtggaggagatt
gcagcagctgctgctgacaatgatctgaccccagtgatgattctgagcatgatggaccga
tga
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