Nothobranchius furzeri (turquoise killifish): 107389527
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Entry
107389527 CDS
T05163
Symbol
frem3
Name
(RefSeq) FRAS1-related extracellular matrix protein 3
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
107389527 (frem3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
107389527
NCBI-ProteinID:
XP_015821184
UniProt:
A0A9D3BW80
LinkDB
All DBs
Position
sgr02:12618827..12660849
Genome browser
AA seq
3142 aa
AA seq
DB search
MAGCLRSSQLCKKWDFFRCLLVTFYLISCFGSVISQSFGPGHVHYQRSGPNEDNILIANN
GIRVPFGRSVFLDPVNDLVIEVQPGDRCHITVLDNDPLAQKPGVLTPKKFPCSFGANEVK
YTHFGSRSPTKDRVKLQLRYDSYTDTVIIPFMLEVEVVFQQLEILIRNMPLNVEKLNGDS
SPVDKKALEFSFEDGVTQCKITSLAGAGGLPRYGTLKNSPANGQMTDCDEFVKLGVLYKH
TAKTKSPNRDYIPMMVELQDNDGNAIMQEHFQMMVRIREGVENTAPKPSFVAMMMMEVDQ
FVMTAITSDMLSAEDVESDPDDLIFNITSPMNPQQGYIISTDDQNLPITSFNQRDVEALK
IAYKPPSEDSEQERIFQLEFEIIDTDGAVSDPFAFMIVVKPMNTLAPVATKNTGQLLFEG
QSRVLSSAQNLEISDEDNLEDVKITVVDGLKHGDLTVFGSRRKFFTPADLDAGTIVYQHD
GSDTYSDNIIFQMTDGNNEVEFLFPITIAPTDDEPPIINANTGLVLFKNEIMQISPFILS
ATDIDSEDSTIKFILEAPFSTIGELLLRQGEPPDDPSQWKFIGTDEMFEQVVTEWFQQDI
LDGKLFYRHVGPHSTSTVTDQFVFRVQDDNDPPNQSGEHSFTIKIHPVDDIPPVLFPGTT
LQMTVKEYELTFFRKKFLCYTDLDSDDRDLKYTIIKPPADTDENNPAPLGEIVLTDSPDT
VVTEFTQAQVNHHKVAYKPPDVELGITAKIAQFTFTVEDTASNSVNGLFTIFLQPVDNKP
PEITNTGFTVMEKSTYVITRKELHATDTDTDDESIIFTVTQIPSYGQLQYLGVYMSNGET
FVLEDIANNRLTYIHGGEESLNDIIKLSVSDGFHEVPIIIRITIEPVDDEMPTIMLPSGV
LGASIDVLENGATEITSNVIQGRDKDTDDLMLTFIVEEPPRLGEILVNGMPAERFTQADV
INGMVVYAHTSGEIGPVKEHDSFNLTLSDMSDQWVVGGNKVQGVMVQVTILPVDSIPPVV
SVGGQFVVVEGEKNVINLDHIQAEDIDTNNDDILCTIIAQPSSGYVENISPATGSEKSRA
GTAITAFTIKDIALGHIYYVQSIHKGVEPVEDQFTFRCSDGINFSERHFLPIVIIPANDE
KPEIFVREFVVMEGMNLVIDIPILNGADADIPGDELHFEIIKKPKHGAIIQQLSTGTIPV
ERFNLEQIKEGANIVYEHDDSETKEDSFEVRLSDGKHKVEKSILVVVIPVDDETPRMAIN
DGLDVEIGETKVISNRALMATDLDSEDKDLTYIVRYGPGQGYLQRINKFGTVLGNITLGM
NFTQDELDKQLIQYVHMGQEGIRDLLKFDVTDGINPLIDRYFYINIGSIDMVFPDVINKG
VTLKEGGKVTLTTDLLSTSDINSPDEFLSFSITRAPSRGHLECTDQPGVPISTFTQLQLA
GNKIYYIHTSDDEVKMDSFEFEVTDGYNPIFRTFRVSITDVDNKKPVLTVHKLIVEEGET
KLITPFELTVEDRDTLDKLLRFTVTQVPVHGQLLFNNTQPITTFTKQDLNENLISYRHDG
TETSDDSFSFIITDGTHTDFYIFPNTVYETRKPQTMTIHISTVDNGVPQIVVNKAAASLR
VLQTGHLGFVFTSKVLRSEDRDSPQRVLRYMVCEPPLHGFIINTALGNDSINTFTQAEIN
DMKICYVLLDKNNATSDIFYFTVEDNGGNKLKPQPFRLNWAWISLEREYYLVDEDAKFLE
VTLKRRGYLGETSFVSIATKDVTAEMDKDFRGKSQKQVQFNPGQTTATWRVKIFTDQEFE
NSETFEIQLSDPVMAVLEYPDAATVEIVDPGDESTVFIPQAEFKIEEDIGELLVPVRRSG
DANQELMVVCYTHQGSATGTIPSTVLSYSDYITRPEDHTSVLRFYKDEREKGCRIIIIDD
SLYEEDESFNVSLSMPMGGQVGPHFPSAKVTILADSDDEPSLYFGEPEYVVDESSGYVEV
KVWRTGTDLSKTATVTVRSRKSDPVSAEAGLDYVGISRNLDFAPGVTMQTFRVTILDDLG
QPQLEGPETFDLVLRMPMNAVLGEPSRTTVTINDTITDLPKVQFKEDRYTVDESNGEVRA
VLYRNGDISLTSTVRCYTRQGSAQVMMDYSERPNTDASIVTFLPGESEKPCVVGLMDDLV
HEEDEEFRLVLGNPKSKSPYGALIGERKEALVTITDEKDKPIIRFSEIKYSVHEPQVKGD
MAIVKIPILRFGDTSKVSVVRVHTKDGSATSGDDYNPLSEDVEFKEGEKKQFVEIEILYD
GQREMREAFTVHMKPDDNMVAEVQMNKAIVYIEEMDSVADVTFPAVPQVVSLLMYDDTAK
SRERPHPSNGYPVVCVTACNPKYHDFDKTGSICSAENINDTLTQYRWLVSAPTGSDGVTS
PMREVDTNTFFTNTKSITLDSIYFQAGSRIQCAARAFNTNGDAGLELSSPIVVISKEEGM
CQPRIPGTVGAEPFSAKIRYTGPDDPDFPNLIKLTINMPHMDGMLPVISTKPLSNFELTL
SPDGTRVGNHRCSNLLDFNEIQTGHGFITDATKNPEIIGETSPYQYSTIMRSTNSLRFYR
NLNLEACLWEFSSFFDMSELLNECGGSIGTDGQVLNLVQSYVTLRVPLFVSYVFHSPVAV
GGWQHFDLQSELKLTFVYDTAILWQDGIGSPPEAELQGAMYPTSMRINEEGRLVVNFKTE
ARFRGQFVMSHPGTSVASMVICADHPGLTFTLILVRTEPTYNQPMQQWTFVSDFAVRDYS
GTYTVKLVPCIASPNGEFSIPPVCHPREPLTFDIDIRFQQVSDPVAAEFSLNTQMFLLSK
RELWLSDGSMGFGEGTDAAFSEGSTIYGRVMVDPVQNLGDSFSCSIEKVFLCTGADGYVP
KYNPTDKEYGCLADAPSLLYRFKILDKAQPETQASAFGDVAFKAMLAQDTPGAQALIGQP
GTDGFMLSSSPLFQVAAGREWFIHAIYAVRSRQNANRNIGKRSVDHLQHGIFSVEQPHNS
EMASRQRRSAPALSGPPLAQDIGIKSNRGTNIQHIALDRSNRMVVSQWQPWSPDHDPLLE
RPLLESSGREPDNTSYLPMFAGIAGLILLICLIAILVILVLCRKRKEKKTTFSPYATSSS
SAYNGYSRGPAGMWSSSDSSEV
NT seq
9429 nt
NT seq
+upstream
nt +downstream
nt
atggctggttgtctgcgtagctcacaactttgtaaaaagtgggacttttttagatgcctg
cttgtgactttttatctcatctcctgttttggttcagtaatttcacagtcatttggtccc
ggtcacgttcactaccaaaggtcaggacctaatgaagacaacatcctcatcgctaacaat
gggatcagagtgccttttgggaggtcagtgtttttggaccctgtgaatgacctggttatt
gaagttcagcctggagaccgctgccacataactgtcctggataacgaccccttggcccag
aaacccggggtgctgacccccaaaaagtttccttgttcatttggagcaaatgaagtgaaa
tacacacattttggatctcggagccccactaaggatcgtgtgaagttgcagcttcgctat
gactcctacacagacacggtcatcatccccttcatgttggaagtggaggtggttttccag
cagcttgagatcctcattaggaatatgccacttaatgttgagaaactcaacggagacagc
agccccgttgacaaaaaggccctggagttttcctttgaggatggtgtcactcaatgtaag
atcacctctctggctggcgctggaggccttcccaggtatggtactctaaaaaatagtcca
gccaatggtcaaatgactgattgtgatgagtttgtaaaattgggcgttctctacaaacac
acggctaaaaccaagtcaccaaacagagattatatcccaatgatggtagagctgcaggat
aatgatggcaatgcaataatgcaagaacatttccagatgatggtcagaatcagagaaggt
gtagaaaacactgctcccaaacctagctttgtagccatgatgatgatggaggtagatcag
ttcgtgatgacagcgattacaagtgacatgctatcggctgaagatgttgaatctgatcca
gatgacttgatcttcaacatcacttcaccaatgaaccctcagcagggttatattatcagc
acagacgatcagaaccttcctatcacttctttcaaccagagagacgtcgaagctctaaaa
atagcctataagcccccctccgaggactcagaacaagaaaggattttccagctagagttt
gaaatcattgacactgacggagcagtgtcagatccatttgccttcatgattgtggtgaag
cctatgaacacattggctcctgttgcaacaaagaacactggacagctgttgtttgaaggt
caatcacgagtcctctccagtgcacaaaatctagaaattagtgatgaggataacctggag
gatgtgaaaattacagtcgttgatggtttaaaacacggagacctgactgtttttggttca
cgcagaaaattcttcacacctgcagatctagatgctggcactattgtgtatcagcacgac
ggcagtgacacatacagtgacaatattattttccaaatgactgatggaaataatgaagta
gagttcctgtttcctatcactattgctcccactgatgatgagccccctataataaatgct
aacactggccttgtattgttcaagaacgaaatcatgcagatctctcccttcatcctgagt
gctacagacattgactcagaagactccacaattaagtttatattggaggcaccattctca
accataggggagctcctgctcaggcagggtgagccccctgatgatccttcccagtggaag
ttcatcgggacggatgagatgtttgagcaggtggtaactgaatggtttcagcaggatatt
cttgatggaaagttgttctaccgtcatgtcggaccccatagcacctcaactgtgactgat
cagtttgtgttcagagtccaagatgacaatgaccctcccaatcaatccggcgaacatagc
ttcaccattaaaatccatcctgttgacgacatcccaccagtgcttttcccaggcaccacc
ctccaaatgacagttaaggaatatgaactcacgttctttcgtaagaaattcttatgttac
actgatctagattcagatgacagagacctgaaatacaccatcatcaaaccaccagcagac
acagacgagaataatccagccccattgggtgaaattgtccttactgatagtcctgacact
gtagtcacagagttcacacaagcccaggttaaccatcacaaagtagcttacaagccccca
gatgttgaactaggcatcactgctaaaatagcgcagttcacatttactgttgaggacacg
gccagtaactcagtaaatggactatttacaattttcctacagccagttgacaacaaaccc
ccagaaattaccaacactgggttcactgttatggaaaaaagtacttatgttattaccaga
aaggagctgcatgccacggatacagacacagatgatgaaagcataatcttcactgtgacc
cagattcctagttatggacagctgcagtatttgggtgtttacatgtcaaatggtgaaacg
tttgtgcttgaagacattgcaaacaatcgcctaacttacatccatggaggagaggaatcc
ctcaacgatatcattaaactttctgtaagtgatggttttcatgaggtacccattatcatc
aggatcacaattgagccagttgacgatgagatgcccacaattatgctcccatcgggtgta
ctgggagcctccattgatgtgctagaaaatggagcaaccgagatcacaagtaatgtcatt
cagggtcgtgataaagacacagatgacctaatgctcacttttatagttgaagaacccccc
aggctgggtgaaatcctggttaacggcatgcctgctgagagattcactcaggcagatgtc
atcaacggaatggtggtctacgctcacacatctggtgaaattggtccagtgaaggaacac
gactcctttaacctaactctctctgacatgtctgatcagtgggttgttggtggaaacaaa
gtccagggtgtgatggttcaagtcacaatcctgcctgttgacagcattccaccagttgta
agtgttgggggccagtttgttgtggtggaaggtgagaagaatgtcattaacttagaccac
attcaagctgaagacattgacaccaacaatgatgacattctctgcaccatcattgcccaa
ccgtcatctggatatgtagagaacatctcccctgccacaggttcagagaaatcaagagct
gggacagccatcactgcctttacaattaaagatattgcccttggtcatatctactatgtc
caaagcattcataaaggagttgaacctgtagaggaccagttcaccttccgctgctctgat
ggtattaatttctcagagcgccacttccttcccatagtcatcattccagccaatgacgag
aagcctgagatatttgtccgcgagtttgtggtaatggagggcatgaatcttgtaattgac
ataccgattctaaatggcgctgatgctgacattcctggggatgaactgcactttgaaatc
atcaaaaaacccaaacacggtgcaataattcaacaactcagcactggcacaatccctgtt
gagaggttcaatttagaacagatcaaagaaggagccaacattgtttacgaacacgacgat
tctgagaccaaagaagacagctttgaggtcaggctttctgatggcaaacacaaggtagaa
aaatccattctcgtcgtagttatacccgttgatgacgagacgccaagaatggctatcaac
gatggccttgatgttgagattggggaaacaaaagtcataagtaacagggctttaatggca
acagatcttgactctgaagacaaagacctaacatatattgtaagatatggtccaggtcaa
ggctaccttcagcgtatcaacaaatttggcacagttttaggcaacataaccctaggaatg
aatttcacccaggatgaactcgacaagcaactaattcagtatgtgcacatgggtcaagag
ggcattcgagacctgttgaagtttgatgtcaccgatggtatcaatccactaattgaccgt
tatttttacatcaacattggaagcattgacatggttttccccgatgttatcaacaaaggt
gtgacgctcaaagaaggtggaaaagtaactcttaccactgacctccttagcacctctgac
attaacagccctgatgagtttcttagctttagcattacaagagcacctagcagggggcat
ttagagtgtacggaccaaccaggtgttccaatctccaccttcacccagctacaacttgct
ggaaacaagatctactacatccatacctcggacgacgaggtgaagatggacagctttgag
tttgaggtgactgatggttacaaccctatcttccgaaccttcagagtgtccatcactgat
gtagataacaagaaaccagttttaactgtacacaagctgattgttgaggagggagaaacc
aagctcattacgccatttgagttgacggttgaggatcgagacaccctcgataagttgctg
cgcttcactgtcacgcaggtgccagtgcacggtcagctgcttttcaacaacacccaacca
atcacaaccttcaccaaacaggatctgaatgagaaccttatcagctataggcacgatggc
acagagaccagcgatgacagcttttctttcattatcacagacgggacacatacagacttt
tacatttttcccaatactgtgtacgagactcgtaaacctcaaactatgacaattcacatc
agtacggtggacaatggtgtgccccagatcgtggttaacaaagctgctgcctcactgaga
gtcctccaaacgggacacctgggctttgtcttcacaagcaaggtccttcgatcagaggac
agagacagtccccagagagtcctgaggtacatggtgtgtgagccacctctgcatggcttt
atcatcaacacggcactgggcaacgatagcatcaacaccttcactcaagctgaaatcaac
gacatgaagatttgttatgtcctgttggacaagaacaacgccacaagtgacatcttctac
ttcacagttgaagataacggtggaaacaaactcaaacctcagccgttccggctgaactgg
gcttggatctctctggaaagggaatactacctggtggacgaagatgccaaattcttggag
gtgactctgaaacgcagaggctacctgggagaaacctcctttgtcagtattgcaactaag
gatgtcacagctgagatggacaaggacttccgtgggaaatctcaaaagcaggttcagttc
aacccaggccagacaacagcgacctggagggtgaagatcttcacggatcaggagtttgaa
aactcagagacctttgagattcagctgtcggatccagtcatggctgtgctggagtatccg
gatgcagcaacagtggagattgtggaccctggagatgaatcgacagtttttattccacaa
gcagaattcaagatagaggaggatattggagagctgttggtgccggtcaggcgttcagga
gatgccaaccaggaactgatggtggtttgctacactcaccagggttcagccaccggcacc
atccccagcactgtgctctcctactccgactacatcacccgacccgaggaccacaccagt
gtgctgcgcttctataaggatgagcgagagaaagggtgccgcatcatcatcattgatgac
tccctgtatgaggaagacgagagtttcaacgtgagcctcagtatgcctatggggggccaa
gtggggccccatttcccatccgccaaagtcaccattttggctgacagcgatgacgagcct
tccctgtactttggggagcctgaatacgtggtggatgagagttcaggctacgttgaggtg
aaggtctggaggactggtactgacctttccaaaactgccacagtcactgtccgctccagg
aagagcgatcctgtttctgcagaagctggactcgactatgttggcatcagtcgcaacctg
gactttgctcctggcgtaacgatgcagacattcagggtgaccatcctggatgacttgggt
cagccgcagctggaggggccagagacctttgaccttgtactgagaatgcccatgaatgct
gttttaggagagccgagcaggacaacagtcaccattaatgacaccatcactgacttaccg
aaggttcagttcaaggaagaccgctacacagtggatgagtctaatggggaagtaagagct
gtgctgtatcgaaatggagacatcagcctcacttccacggttcgctgttacactcgtcag
ggatcggctcaggtcatgatggactacagtgagaggccaaacaccgatgcatccatcgtc
acttttctaccaggtgaatctgagaagccgtgtgtggttggtttgatggatgacttggtc
cacgaggaggacgaggagttccgcttggtgctgggaaaccccaagagcaagtctccctat
ggggccttgatcggagagcggaaggaagctctggtcaccatcacagatgagaaagacaag
cccatcatccgtttctctgagatcaagtacagtgtacatgaaccccaggtaaaaggtgac
atggcaattgtgaagattcccattctgcgcttcggagatacctcaaaggtctccgtagtg
agagtgcacacaaaggatggatctgcaacctctggagatgactacaacccgctgtcagaa
gacgtggagttcaaagagggcgagaagaagcagtttgttgaaatcgagatcctgtacgat
ggtcagagagagatgagagaagccttcacggtgcacatgaagcctgatgacaacatggtg
gctgaggtacagatgaacaaagccatcgtgtacattgaggagatggacagtgtagcagac
gttaccttccctgcagttccccaggtggtttctctcctcatgtatgacgacacagctaaa
agtagagagaggccccatccatccaatggataccctgttgtatgtgtgacggcctgcaac
ccaaagtaccacgattttgacaaaacaggttccatctgctcagctgagaacatcaacgat
actctcacccagtaccgctggctggtgagcgctcccactggatcggatggagtaaccagc
cccatgagggaggtggacactaacaccttcttcaccaacacaaagtctatcactttggat
tcaatctacttccaagctggatccaggatccagtgtgcagccagagccttcaacaccaat
ggagacgctggtctggagctgtccagtcccattgttgtgatcagcaaagaggagggcatg
tgtcagcctcgaattccaggaacagttggagctgaacctttctctgctaaaatccgctac
actggcccggatgatccagacttcccgaacctcatcaaactgaccatcaacatgcctcac
atggatggaatgctaccagtgatctctacgaaacctctgtcaaactttgaactcaccctg
agtccagatgggacccgtgtgggtaaccaccgctgctccaacctgctggacttcaacgag
atccagaccggccacggcttcatcacagacgcaacaaagaaccctgaaatcatcggggag
acttcaccgtaccagtacagcaccattatgcgttcaacaaattccctgcgcttctataga
aaccttaacttagaggcctgcctttgggagttcagcagcttctttgacatgtcagagctg
ctgaatgaatgtgggggttctataggcactgacggacaggtcctgaaccttgtccagtca
tacgtcactctgcgcgtccccctctttgtttcctatgtctttcattctcctgtggctgtt
ggaggctggcagcactttgatctccagtcggaacttaaactcacgtttgtctacgataca
gcaattctgtggcaggacggtatcggcagcccacctgaagctgaactacaaggagccatg
taccctaccagcatgcgtataaatgaggaaggtcgactcgtggtgaatttcaaaactgag
gctcgcttcaggggccaatttgttatgtctcatccaggaaccagtgtggcatccatggtg
atttgcgctgaccatcctgggctgacgtttactctcatccttgtcagaaccgagccaact
tacaaccagcccatgcaacaatggacttttgtctctgactttgcagtcagagactactca
gggacttacacagtgaagttggttccctgcattgcatcacccaatggagagttcagcatc
cctcctgtgtgccatccaagagagccgcttacttttgacattgacattcgcttccagcag
gtgagcgacccagtagcagctgaattcagtctaaatacacagatgttcctcctatccaag
cgagagttgtggctgtctgatggctccatgggttttggagaaggaacggatgctgctttt
tcagaaggctccacaatttatggccgtgtgatggtagaccctgtccagaacctgggcgac
tccttctcctgtagcattgagaaagtgttcctctgcactggagcagacggatatgtcccc
aaatacaaccccacggacaaggagtatggttgcttggcagatgcaccctccctgctttac
agattcaaaattctggacaaagcccagccagagactcaagcctcagcatttggagatgtt
gctttcaaagccatgctggcccaagatactcctggagctcaggctttgattggacaacca
ggcacggatgggttcatgttgtcttcgtcaccactttttcaggtggctgctggtagggaa
tggttcatccatgcgatctacgctgttcgctctagacaaaatgccaatcgtaacattgga
aagcgcagcgttgaccatctccaacatggcattttctcagttgagcagcctcacaactcg
gagatggccagtcgccagcgccgttcggcccctgccttgtctggtccacctctggcccag
gacatcggcatcaaaagcaaccggggcaccaacatccagcacattgctctggaccgatcg
aaccgcatggtggtcagccagtggcaaccctggtcgccggaccatgaccctcttctagaa
cgccccctactggagagttcaggcagagagccagacaacacctcctacctacccatgttt
gcgggaatcgcaggtctaatccttctcatctgcctcatcgctattctcgttattttggtg
ctgtgccgtaaaaggaaagaaaagaaaactacattctcaccatatgccacttcctcatca
tctgcctacaatggctacagccgaggaccagctggcatgtggagcagctcagacagctct
gaagtctag
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integrated database retrieval system
