Nothobranchius furzeri (turquoise killifish): 107389568
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Entry
107389568 CDS
T05163
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107389568 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107389568 (hspd1)
03110 Chaperones and folding catalysts [BR:
nfu03110
]
107389568 (hspd1)
03029 Mitochondrial biogenesis [BR:
nfu03029
]
107389568 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107389568 (hspd1)
Enzymes [BR:
nfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
107389568 (hspd1)
Messenger RNA biogenesis [BR:
nfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
107389568 (hspd1)
Chaperones and folding catalysts [BR:
nfu03110
]
Heat shock proteins
HSP60 / Chaperonin
107389568 (hspd1)
Mitochondrial biogenesis [BR:
nfu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
107389568 (hspd1)
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107389568 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
107389568 (hspd1)
Exosomal proteins of breast cancer cells
107389568 (hspd1)
Exosomal proteins of colorectal cancer cells
107389568 (hspd1)
Exosomal proteins of bladder cancer cells
107389568 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
107389568
NCBI-ProteinID:
XP_015821248
UniProt:
A0A1A8A1W7
LinkDB
All DBs
Position
sgr14:11460152..11464611
Genome browser
AA seq
575 aa
AA seq
DB search
MFRLPTIMKQVRPLSRVLAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDNISKGANPVEIRRGVMMAVEAVINELKNLSKPVTTPEEIAQVATISANGDV
EIGNIISNAMKKVGRKGVITVKDGKTLQDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGTVFGDEALGLALEDIQAHDFGKVGEVQITKDDTLLLKG
GGNPADIEKRAAEIAEQLEHTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDALKTANSDQKIGVDIIRRSLRIPALTIA
KNAGVEGSLVVEKILQGPPEIGYDAMQGEFVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTEIPKEDKEMPGGMGGMGGMGGMGGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtttacccacaattatgaagcaggtcaggcctttgagtcgggttctagctcct
cacctcacacgagcctacgccaaagatgtgaagtttggggctgatgcccgtgccctcatg
ctgcagggggtggacctgctggctgatgcagtggctgtcacaatgggtccgaagggtcgc
actgtgatcattgagcagagctggggaagtcccaaggtcaccaaggatggagtgacggtg
gccaaaagtattgacctgaaggacaagtacaagaacattggagccaagcttgtgcaggat
gtggctaacaacaccaatgaagaggctggcgatggcacaaccacagctacggtgctggct
cgcgccattgctaaggaaggctttgataacatcagcaaaggtgcaaaccctgttgagatc
cgccgtggggtcatgatggctgtggaagctgtcatcaacgagctgaagaatctgtccaag
cctgttacgactccagaggagatagcacaggttgctacgatctctgccaatggagacgta
gagatcggtaacattatatccaacgccatgaagaaagttggtcgcaaaggagtcatcaca
gtaaaggacgggaagactctgcaggacgagctggagatcatcgagggtatgaagtttgac
cgtggttacatctcgccttacttcatcaacaccgcaaaaggccagaagtgtgagttccag
gatgcttacctgttgcttagtgaaaagaagatctccagtgtccagagcattgtgccagcg
ttagagatcgccaaccagcatcgtaaacctctggtgattgttgctgaggatgtggacgga
gaagccctgagcaccctggttcttaacaggttaaaggttgggcttcaggtggtcgctgtt
aaagctccaggcttcggtgacaacaggaagaatcagctgaaggatatggccatcgccacc
gggggcactgtgtttggtgatgaagctctgggtctggctcttgaggacatccaggctcat
gactttggcaaagtcggtgaggtgcagatcaccaaagatgataccctgctactgaagggt
ggaggcaaccctgctgacatagagaaacgcgcagcagagattgctgagcagctggagcac
accaccagtgactatgaaaaggagaagctcaatgagaggctggcgaagctatcggatggt
gtggctgtgctgaaggtgggaggaacaagtgacgtagaggtgaatgagaagaaggaccgt
gtgaccgacgctctgaacgccacgcgggctgcagtggaggagggcatcgtgctcggtgga
ggctgtgctctgctgcgctgtattcctgcacttgatgccctcaaaactgccaatagtgac
cagaagatcggtgtggacatcatcagacggtcgcttcgtattcctgccttgaccatcgcc
aaaaatgctggagtggagggttctctggtggtggagaagatcttgcagggaccaccagaa
ataggctatgatgccatgcaaggagagtttgtcaacatggtagagaaaggcatcatcgac
cctaccaaggtggtgagaacagcgcttttggatgctgcgggagttgcatctctgctctca
actgcagaggccgttgtcacggaaatacccaaggaggacaaggagatgcctggaggcatg
ggtggaatgggtggtatgggaggaatgggaggtggtatgggtttctaa
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