Nothobranchius furzeri (turquoise killifish): 107389637
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Entry
107389637 CDS
T05163
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107389637
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
107389637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_2
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
107389637
NCBI-ProteinID:
XP_015821364
UniProt:
A0A8C6NQS8
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All DBs
Position
sgr14:complement(16436558..16445790)
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AA seq
895 aa
AA seq
DB search
MGLKDHLEDGTGHILNLGLDLDYLHVDGADRQVGSNVSKASRVLQVHGGAQSRSSSGTGV
STISLSTNSSCSCSSSCSTFSEESAISDNEDERLQNGSLSGCRGSIQDHQQESSLDGDLV
RLDLAPSPFSGNTSQSGSSPPSDPVSDYRTKVEFALKLGYSENLVLLVLKKLGPHALIND
ILGELVKLGTRTEMEQPRGPTASQSPSSSLACSSSSSSSSNSSLDCCQLLSPSPLLDGKD
NLRPVVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHRDITVFVPAWRKEQSRPDALI
TDQEILRRLEKDKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEK
PEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVAPESKKQPCPYGKKCT
YGHKCKFYHPERGSQPQQSVADELRASAKISAVASRGLLQHALLVKSQSSGQSDEMPEAE
PRKCKTLPNQTPWSSLPTSMEDTFQILLKPEECNGSKSSSIIVRHPAPGGHLDRWEHPRV
DSEGGGGLTEASRSSQAESYRRCSSPEVRYRSLVKTYSSLSLVVPQTPECILSADLQAGS
LASDCSSDGSLGSDSFSPDSTLDDSPKCPHHHSHHQLYYSNRYGHQATQCSPALGQHSSY
GYSVSHGVQTSRGSVIKESPPSASSQASPHHLKNPSAYIPPQHQHPSFRRFPGELPTQTS
TPRSNSQSSPLSCSLTASPEGELQDSRVYNGSPFHSKRNYFGQPQHQINWEPHHQPSPKP
CYDLFSYKSFPPLYGKSWHSPWSQQAHPSPRGLSATLPQQPLPSTASPKSHLLSEHQSEN
AALGRYQDLRERLFVNLCGIFPSDLVRKVMTKNPHVMDAQELAAAILIEKLQHPS
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatggaacaggccacatcctcaacctgggactggat
ctggactatctccatgtggatggtgccgacaggcaggttggctcaaacgtttcaaaagct
tctagggtcttgcaagtccacggtggtgcacagagcaggagcagttctggtactggtgtg
agtactataagtctaagtacaaattcaagttgcagctgcagtagtagttgcagtactttt
tcagaagagagcgctatttctgacaatgaagatgaacggcttcaaaatgggagcctttct
gggtgcaggggctcaattcaagatcaccagcaggagtcctctttagacggtgatctggtc
aggctggacctggcaccaagcccgttctctggaaacacatctcagtccggatcatcaccg
ccctctgaccccgtctcagactaccgcaccaaggttgagtttgcccttaagctgggctat
tctgaaaacctagtgctgttagtgcttaagaaactgggcccacatgcactcatcaatgac
attctgggagagctggtcaaactgggaaccaggacagagatggagcagcctagaggtcca
actgcatcccagtctccttcttcctccttggcctgttcctcctcctcttcctcttcctcc
aactcttccctggactgctgtcagctactgagtccgtcccctctgctggacggcaaagac
aaccttcggcctgttgtggtggatggaagcaacgtagctatgagtcatgggaacaaggaa
gtgttctcctgccaaggcatccagctggctgttgattggttcttggagcgagggcaccgt
gacatcaccgtttttgttccagcctggagaaaggagcagtcacgacctgatgctctaatc
acagaccaggagatcttgcggcggctcgagaaagataagatcctggttttcaccccatct
cgacgtgtccagggacgccgcgtggtctgctatgatgaccgattcatcgtcaaactggcc
tatgagtcagatggtatcattgtttccaacgacaactaccgagacctggccaatgagaag
ccagagtggaagaaatttattgatgagcgtctgctgatgtactcctttgtaaatgacaaa
ttcatgcctccggatgacccactgggacgacacggaccgagtctggagaatttcctgagg
aagaggccggttgctcctgaatctaagaagcagccttgtccttatggaaagaagtgcaca
tatggccacaagtgtaagttctaccatccagaaaggggtagtcagccgcagcaatctgtg
gctgatgagctccgcgccagtgccaaaatttcagcagtagcttccagaggcctcctacag
catgccctgttggtgaagagccaaagttctggtcaatcagacgagatgcctgaagctgaa
ccaagaaaatgcaagacactaccaaaccagactccatggagctccctgcctacttccatg
gaggacacgtttcagattcttctcaaaccagaggaatgtaacggaagcaaaagcagcagt
atcattgtaagacatcctgctccaggaggacacctggacagatgggagcatcccagggta
gatagtgaaggtggtggtggactaactgaagcttctagatcaagtcaggctgaatcttac
cgcagatgttcatctccagaggtgagatataggtctctagtaaagacctattcaagtctc
agtcttgtggtgccacagaccccagaatgcatcctatcagctgacctgcaagcaggttct
ctggcatcagattgcagcagtgatggcagccttggatcagactctttctctcctgactcc
acattggatgacagccctaaatgtccccaccaccattctcaccatcaactctactactca
aacaggtacggccaccaagcaacccagtgttctcctgctctgggtcagcattcatcttat
ggatattctgttagtcacggagttcaaacatcacgtgggtctgtcatcaaagaaagtcct
ccttcagcgtcctctcaggcgtcaccacatcatcttaagaatccctcagcctacatccca
ccccaacatcagcatccatccttcagacgttttcctggtgaactaccaacccaaacatct
actccccgctctaattctcagagttcccccctcagctgcagcctaacggcatcaccagaa
ggtgagctccaggactccagagtgtacaatggttcaccatttcattctaaaagaaactac
tttgggcaacctcagcatcagattaactgggagcctcatcatcagccttctcctaagccg
tgctatgatctgttttcctacaagagcttcccacctctatatggtaagagctggcactct
ccctggagccagcaagctcatccatcgccccgtggcctttcagcaaccctcccacagcag
ccccttccatccaccgcatcccctaagagtcacctgctgtcagagcaccagtctgagaat
gctgctttgggtcgataccaggacttaagggaaaggctgtttgttaacttgtgtggcatc
ttcccatcagatttggtgaggaaggtgatgactaagaaccctcatgtgatggatgcccag
gagcttgcagctgcaattctgattgagaagttgcagcatccctcgtga
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