Nothobranchius furzeri (turquoise killifish): 107389698
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Entry
107389698 CDS
T05163
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nfu01002
]
107389698
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107389698
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107389698
Peptidases and inhibitors [BR:
nfu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107389698
Ubiquitin system [BR:
nfu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107389698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Motif
Other DBs
NCBI-GeneID:
107389698
NCBI-ProteinID:
XP_015821442
UniProt:
A0A8C6LXJ1
LinkDB
All DBs
Position
sgr14:complement(19666621..19714178)
Genome browser
AA seq
2616 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQAPDAQSQPPLPQNHTSSPNSSNENSPVSPPDEQSQGDAPP
QLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLIELCVAKLSQDWFPLLELLAMAT
NPHCKFHIYNGTRPSETVPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQILH
DRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDDELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRF
VIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNA
SKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYS
CSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKIPINIHTNL
VSQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQLPKEEQAEFDPQTVRPG
SRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLM
GDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDD
LELIGLDYLWRVVIQGSDDIANRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKA
SYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKH
ITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGEAVDPAD
DRKLIGQLNLKDKTLITAKLTQISANMPSSPESSSDSSTGSPGNHGNHYSDGPNPEVEGC
LPGVIMSLHPRYISFLWQIADLGCNLSMPQLRDGARVLMKLMPPDNTTVENLRAVCLDHA
KLGENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPL
VLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPTAEGNIPVS
PINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDENFFQASKYIPDICVIRA
VQKIVWASGCGTVQLVFSSSEEISKIYEKTNSAKEPDGEDEQVCCEALEVMTLCFALMPT
ALDTLSKEKAWQTFIIDLLLHCHSRSVRPMAQEQFFLMATRCCMGHRPLLFFITLLFTVL
GTTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGETG
VEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMKSG
EFPTEQAIPVCSTPACINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCETLTEWEYLP
PVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGADVDDDMSGDEKQE
NESNVDPRDEVFSYHHQFDDKPSGKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGF
WKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPPMLSKVLGGSFADQKICQGC
PHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIK
KLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQVI
QQNELSEATPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTE
CKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDSELVK
YISELSISSTKPHQVKMPSVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNP
PPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSKNVRY
WFAHNVLFAYPNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPTASPGPSAQG
CDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVPASFM
LVALDEGPGPPIKYQYAELGKLYTVVSQLIRCCDVSSRMQSSINGNPPLPNPYGDTNLTA
PVMPVQQLVAEILFVRTSYVKKITEDCSNSEETVKLLRFCCWENPQFSSTVLSELLWQVA
YSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQ
CIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGTPQYTYNNWSPPV
QSNETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDEQEAPDDQDSSPPEDT
SLYPHSPGTTQFQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPTPAPASAPAQAPTQTPG
PGTTSGSGPRAQENWEGTEEVTPTPTTTPAPAPPKE
NT seq
7851 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaccacgcgtggctctccggtggggggcaatgatagtcagggccaaggccag
gcacctgatgctcagagccaacccccgctgccacagaaccatacatcatctcctaactca
tctaatgagaactctccagtgagccccccagatgagcagagccagggggatgccccccct
cagctggaagaggaagagcctgcttttcctcacactgaccttgccaagcttgatgacatg
atcaacaggcctcggtgggttgttccagttttgccaaaaggagagctagaagtcctcttg
gaagctgctatagacctgagtaaaaaaggactggatgtaaaatgtgaggcatgccagagg
tttttccgggatggtttaacaatttctttcacaaaaatcctgacggatgaggcagtcagt
ggctggaagtttgaaatacataggtgcatcattaataacacacatcggttgattgagctg
tgtgtggcgaagctctctcaggactggttcccattactggagctactggcgatggccacc
aacccccactgcaagttccacatctacaatggcacacggccctctgagaccgtccctgca
ggagcacagctagctgatgacgagctctttgctcgtccaccagacccaagatctcctaaa
ggctggttggttgacttaataaacaaatttggcacgctaaacgggtttcaaattttgcac
gaccgcttcatgagcggccaagcactgaacgtccagatcatcgctgcacttatcaaacct
tttggccagtgttatgagtttctcacattgcacacagtcaagaagtacttccttccagtc
attgagatggtcccccagttcctagagaatctcacagatgatgagctaaagaaagaggcc
aagaatgaagccaaaaatgatgcactgtccatgataatcaagtctttaaagaacctggct
tcccgtgtaccagggcaggaggagactgtgaagaatttagaaatttttaggttaaaaatg
attcttaggttattacaaatttcttcttttaatggcaagatgaatgcactaaatgaagtt
aacaaagtgatctccagtgtgtcctactacacccaccggcataacccagaggaagaagaa
tggctcactgctgagcgcatggcggagtggatacagcagaaccacatcctgtccattgtg
ctgagggacagtttgcatcagccgcagtatgttgagaaactggaaaagatccttcgattt
gttataaaagagaaggccctcaccatgcaagatttggacaacatctgggctgctcaggct
ggcaagcatgaagccattgtgaagaacgttcacgaccttttggccaaactggcgtgggac
ttctcacctgagcagcttgaccatctttttgactgctttaaggcaagctggaccaatgcc
agcaaaaagcaacgcgagaaactgcttgaacttatccgtcgcttggctgaggatgacaag
gatggtgtgatggcccacaaagtcctcaacctgctgtggaacctggcgcacagcgatgat
gtgcctgtagacatcatggaccaggctctcagcgctcacatcaagatcttagactacagt
tgctcacaggatagagacacacagaagattcagtggatagatcgcttcatagaagaacta
cggactaatgacaaatgggtgatccctgccttgaagcaaatcagggaaatctgtagcctc
tttggagaagctcctcaaaaccttagaaagaaaattccaattaacatacacacgaactta
gtgagtcaaacccagaggagtcctcatgtattttaccgccatgacctaatcaaccagctg
cagcataaccacgctctcgtcactctggtagctgaaaatctctcagcctacatggagacc
atgaggcagctacccaaagaagaacaggcagagtttgacccccagacagtcagaccagga
agccgctatagtcacgttcaagaagtgcaggagcgacttaacttcctgaggttcctgtta
aaagatggccagctgtggctgtgtgcccctcaggctaagcagatctggaagtgtctggct
gagaatgctgtgtttctgtgtgaccgagaggcctgctttaaatggtactcaaagctgatg
ggcgatgagccagatctagacccagacatcaacaaggacttctttgagaacaacgttcta
cagttagatccatctctgctgacggaaaatggcatgaagtgctttgagaggttcttcaag
gctgtcaactgcagggaggggaagctggtagcaaagcgcagggcctacatgatggatgac
ctggaactaatcggcttggactatctttggagggtggtgattcaaggaagcgacgacatt
gcaaatcgagctatagacctattaaaagagatctacaccaaccttggaccaaaactacaa
gtcaaccaggttgagattcacgaagacttcatccagtcttgttttgaccgtctgaaggcg
tcctatgacacactttgtgtcttggatggagacaaagacagcattaattgtgcaaggcag
gaagccatccgcatggtgcgagttctcaccgtgctcaaagagtacatcaatgagtgtgac
agtgattaccacgaggagagaactatactgcctatgtcaagagctttccgggggaagcac
atcacattgattgtacgattccccaaccaagggcgtcaggttgatgatttggacatctgg
tcacataccaatgacactattggctcagtccggcgcggcatcctaaacagaataaaggct
aatgctgcacacaccaagatcgagctcttcattggtggggaagctgttgatccagccgat
gacaggaagctgattgggcagctcaatttgaaggacaaaacgctgatcacggccaagctg
acccagattagtgctaacatgccctcaagtccagaaagctcttccgactcatccacgggt
tctcctggtaaccatggaaaccactacagtgatgggcctaaccctgaagtcgagggctgt
cttcctggtgtgattatgtcgctgcatccgcgctacatctccttcctgtggcagatagcc
gacctgggctgcaatcttagcatgcctcagcttagagatggtgctcgagttctcatgaaa
cttatgcctccagataacaccacggtggagaatctgagagctgtgtgtctggatcatgcc
aaacttggtgagaacagtctgagtccttcactggactcacgtttcttcggcccttcaccc
tcacaagtgctctacctcattgaggttgtgtatgctttgctaatgccagctagtgccact
ctgggcgaggatgcgagtgactttcagtataacttcttaaagagcggtggtctgcctttg
gttttgagcatgctgaccagaaacaacttcctcccttcggcggacatggagacacgccgc
ggggcttacctcaacgctctgaagatcgctaagctcctcctgactgcagttggctttgga
cacgtaaaggctgtggctgaggcctgccagccgaccgcagagggaaatattcctgtctct
ccgataaatcaggccactcacgaccaagcactggttcttcagagtgctctgcaaaacatt
cccaaccctgcttcagagtgcatgctgcgaaatgtagccattcgcctggcccagcagatt
tctgacgagaatttcttccaggcatcgaagtacatcccagacatttgtgtgattcgagca
gttcagaaaattgtgtgggcatcaggctgtggtacagttcagctcgtcttcagttccagt
gaagagatcagcaagatatacgagaagacaaattcagcaaaggagccagatggagaagat
gagcaggtgtgctgcgaggctttggaagtgatgacgctgtgttttgccctcatgcccacg
gctcttgacacactcagtaaggagaaggcttggcagaccttcatcatagacctgctgcta
cactgccacagcaggtctgtgcgaccgatggcccaggagcagtttttcctgatggcaact
aggtgctgcatgggccatcggccccttcttttcttcatcaccctcctcttcacagtgctc
gggaccacggcaaaagagagagccaaacatgccggggactacttcactttgctccggcat
ctgctgaactatgcttacaacagtaacatcaacttgccgaatgctgaggtgctgctcaac
aatgagattgactggctgaaacgaatacgggatgaggttaaaaggacaggggagacgggt
gtggaggaaactatacttgagggccaccttggagtcaccaaagagcttctagccttccag
acaccagaaaagaaatattacatcggctgtgagaagggaggagcaaacctcataaaggag
ctgatcgatgacttcatcttcccggcatcaaacgtttacctgcagtacatgaagagtgga
gagtttcccactgagcaggccattcctgtgtgtagcacacctgcatgcatcaacgctggc
tttgagctcctggtggctctggctgtcggctgtgttcgcaacctcaaacagatagtcgac
actctgactgatatgtactacctgggttgtgagacgctaacagagtgggagtacttgcct
ccagtggggccacggcccaacaaaggctttgtaggtctgaagaatgctggtgctacttgt
tacatgaactctgtcattcagcagctgtacatgatccccccgatccgcaacggcatcttg
gctatcgagggcaccggcgccgatgtggatgatgacatgtcaggggatgagaaacaggag
aatgagagtaatgtagaccctcgagatgaggtgttcagctaccatcaccagtttgacgat
aaaccctccggtaagtctgaggacagaaaggagtacaacatcggtgtgttgcgccacctg
caggtcatctttggccacctggctgcatccagacttcagtactacgtcccaagaggattc
tggaaacagttcaggttatggggcgaaccagttaatttgagggaacagcacgatgctttg
gagttcttcaactctttggtggacagtctcgatgaagccctcaaagctctaggtcaccct
cccatgctcagtaaggtgctgggaggctcctttgctgaccagaagatttgtcaaggatgc
ccccacaggtatgagtgtgaagagtccttcacaacacttaatgtagacatcaggaaccat
cagaacctgctggactccatggagcagtatgttaaaggagatctgctggaaggagccaat
gcctaccactgtgagaaatgtaataagaaggtggatacagtgaagcgtctgctgatcaag
aagctgccgccggtcctcgccatccagctgaagcgctttgactacgactgggagagggag
tgtgccattaagttcaatgactattttgagttccccagggagctggacatggagccgtac
acagtagcaggtgtggccaagttggagggtgatgatgtgaacccagagaaccaggtgatc
caacagaatgagctgtctgaagccacgccgccgggcagctccaagtatcgactggtagga
gtgctggttcactcaggccaggccagcggtggacactactactcttatataatccagaga
aatgggggcgacggtgagaagaaccgctggtataagtttgatgatggcgatgtgactgaa
tgtaaaatggacgatgaggaggaaatgaagaaccagtgctttggtggagaatacatgggc
gaagtgtttgatcatatgatgaaaaggatgtcgtatcggagacagaagcgctggtggaat
gcttacatcctgttctacgagcgaatggactcgctggacaaggacagtgaacttgtcaaa
tatatctcagagctgtccatctcctccaccaagccacatcaagtcaagatgcctagtgtc
atcgagtgcagcgtccgcaagcagaacgtgcagttcatgcacaatcgaatgcaatacagc
ctggaatatttccagttcattaagaaactcctgacctgtaacagtgtctatttaaatcct
cccccaggacaagaccacctgctgcctgaggcagaggagattgctatgataagtgctcag
ctggctgctcggttcctcttcagcacaggttttcataccaagaaggttgtacgcggtcct
gccagcgactggtatgatgccctctgcatcctactgaggcacagcaagaatgtacgctat
tggtttgcacacaatgttctgtttgcttaccctaatcggttctctgagtacctcctcgag
tgcccgagtgctgaggtccgtggtgcatttgccaagctcatagtcttcattgctcacttc
tctctgcaagacggcccctgtccctcccccaccgcctcacctggaccctcagctcagggc
tgcgataatctcagcctcagtgaccacttgttaagagctgtactcaacctgctcagaaga
gaggtctcggaacatggccgtcacctgcagcagtactttaacctctttgtcatgtatgcc
aatctgggcctggcagagaagactcagctgctgaagctaaatgttcctgcctcttttatg
ctggttgctctggacgagggtcccggacctcccattaagtaccagtacgctgagctgggc
aagctctacactgtggtgtcccagctcatccgatgctgtgacgtctcctctcgtatgcag
tcctccatcaatggtaatcctcccctgcctaacccatacggggacacaaacctgaccgct
ccagtgatgcctgtgcagcagctggtggcagaaatcttgtttgtgaggacgagttatgtg
aagaaaatcacggaggactgcagcaactctgaggagactgtgaagctgcttcgtttctgc
tgctgggagaaccctcagttttcctccactgtgctcagtgaactgctctggcaggtggca
tattcctacacctatgagctgaggccttacctggacttgctgctacagatcctgctcatc
gaggattcgtggcaaacgcacaggatccacaatgtgctgaaaggcattcctgatgacaga
gatgggctatttgacaccatccagcgttcgaagaaccactaccagaaacgggcttatcag
tgcataaagtgcatggtggccctttttagtaactgctctgtggcataccaaatactacag
agtaacggggacctgaagcgtaagtggacatgggctgtggagtggttaggagatgagctg
gagaggagaccatacacaggaactccccagtacacctacaacaactggtctcctccagtt
cagagcaatgagacttccaacggatatttcctggagcgctcacatagtgcacgtatgaca
ctggccaaggcctgtgaactctgtcctgaagagctcaagtgtactcagggaagcccaggg
aaggagccagatgaacaggaagcacctgatgatcaagactcctcccctcctgaggacacc
tctctgtacccccactctcctggaaccacccagtttcagcagaacaaccacccccatggg
cagccatacactgggcctgctgctcagcacatgaacaacccccagcgtcctggtcctgcc
tctgctccaactccagccccagcctcagctccggcccaagccccaacacagaccccaggc
cctggtaccacttctggctcaggcccacgagcacaagagaactgggagggcactgaggag
gtcacccccaccccaaccactaccccagcgcctgccccacctaaagaataa
DBGET
integrated database retrieval system
