Nothobranchius furzeri (turquoise killifish): 107389838
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Entry
107389838 CDS
T05163
Name
(RefSeq) amyloid beta A4 protein-like isoform X1
KO
K04520
amyloid beta A4 protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107389838
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nfu01002
]
107389838
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nfu00535
]
107389838
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107389838
Peptidases and inhibitors [BR:
nfu01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
107389838
Proteoglycans [BR:
nfu00535
]
Cell surface proteoglycans
Others
107389838
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Others
107389838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
Beta-APP
APP_amyloid
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
107389838
NCBI-ProteinID:
XP_015821712
UniProt:
A0A8C6L323
LinkDB
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Position
sgr14:24401602..24418070
Genome browser
AA seq
747 aa
AA seq
DB search
MEEHTAFLLLLVATLTLSSEVPLDDSVGLLTEPQVAMFCGKLNMHIDVQTGKWESDPSGS
KSCIGTKEGILQYCQEVYPELQITNVVEANQPISIPNWCKKSRKQCRSHTHIVVPYRCLV
GEFVSDALLVPDKCKFLHKERMDQCESHLHWHTVAKESCGDRSMNLHDYGMLLPCGIDRF
RGVEFVCCPAEAERVMDNTEQEGEESDVWWGGADAEYADNSMTRPADTEPATTEDNEDVV
QEEEDFEQDDNGDGEEDDDEDIDVIDERESIDERNANIAMTTTTTTTTESVEEVVRAVCW
ARAESGPCHAMLQRWYFMPEKGRCAPFLFGGCAGNRNNFESEEYCLAVCSSSLPTVAPSP
PDAVDQYLESPGDDNEHTDFRRAKESLEAKHREKMSQVMREWEEAERQSKNLPRADKKAV
IQHFQEKVEALEQEAAEERQQLVETHMARVEALLNSRRRMALENYLSALQANPPRPRQVL
SLLKKYVRAEQKDRQHTLKHYEHVRTVDPKKAAQIRPQVLTHLRVIDERMNQSIGLLYKV
PSVANEIQKQVAIVVQRVQSELSQQVSSLQSDGRVDGRVSYGNDALMPDQTYSSAPLDPG
LDGLGFSHPESFNQPNTENHVEPVDARPNPDRGFPTRPVSALNPDVRMESKDRQSAGYEV
YHEKLVFFAQDVGSNKGAVIGLMVGGVVIATVIVITLVMLRKKQYTSIHHGVIEVDAAVT
PEERHLAKMQQNGYENPTYKFFEQMQN
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcacacggcgtttctgctgttactggtggcgaccttgacgctttcatctgag
gtgcctttggatgactcggtgggtttgctaactgagccccaggtggccatgttctgcggg
aagctcaacatgcacatcgatgtacagactgggaaatgggagtccgacccctcaggctcc
aagagctgcatcggcaccaaggagggcatcttgcagtactgccaggaggtgtacccagag
ctacagatcacgaatgtcgtagaggccaaccaacctatcagcattccaaactggtgcaag
aaaagccgcaagcagtgccgcagtcacacacacatcgtggtgccctaccgctgcctggtt
ggagagtttgtcagcgatgctctgcttgttcctgataagtgtaagttcctgcacaaggag
aggatggatcagtgcgagagtcacttgcactggcacactgtagccaaagagtcttgtgga
gaccgttccatgaatctccatgactacgggatgctgttgccatgtggaattgaccgtttc
cgaggggtggagtttgtgtgctgcccagcggaggcggaacgtgtcatggacaacacagaa
caagaaggggaggagtctgacgtctggtggggcggggctgacgctgaatacgccgacaac
agcatgacccgtccagcagacacagaaccggccaccacagaggacaacgaagacgttgtt
caagaggaggaagactttgagcaggatgacaacggagatggcgaagaagacgatgatgag
gacattgatgtgatcgatgaacgcgaaagcattgatgagcgcaacgctaacattgccatg
acgaccactaccaccaccactactgaatctgttgaggaggttgtgcgagcggtgtgttgg
gctcgcgctgagtcgggcccgtgtcacgccatgctgcagcgttggtacttcatgcctgag
aagggcagatgtgctcccttcttattcgggggctgcgcgggcaacaggaataactttgag
tcggaggagtactgccttgctgtctgtagcagctcgttacccaccgtagcccccagccct
ccagatgccgtggatcagtacctggagtctcccggtgatgacaatgaacacacagatttc
aggagggccaaagaaagcctggaggccaaacatcgtgagaaaatgtcccaggtcatgagg
gagtgggaggaagcggagagacagtccaagaatcttcctcgtgctgacaaaaaagctgtc
atccagcacttccaggagaaggtggaggctctggagcaggaggcagcagaggagcgacag
cagctggtggagactcacatggcccgggtggaggctctgctcaacagtcgcagacgcatg
gctctggaaaattacctcagcgctctacaggccaatcctccacggccccgacaggtgctg
agcctgctgaagaagtacgtacgtgcagaacagaaagacaggcagcacacactgaaacac
tacgagcatgttcgcacagtcgatcctaagaaggcagctcagatccgacctcaggttctg
acccacctccgtgtgatcgatgagaggatgaatcagtcaataggtctgctctacaaagtc
cccagtgtggctaatgagatccagaaacaagttgcaatcgtagtgcagcgagttcagtct
gagctctcccagcaagtgtcctccctgcagagcgacgggcgggtggatggtcgggtgagt
tatggtaacgatgccctgatgccggatcagacctacagctctgctcctctggatcccggt
ttggacggactgggcttcagtcatccggagagctttaatcaaccaaacacagagaaccac
gttgagcccgtagatgctcgtcctaatccagacagaggattcccaacgagacctgtttct
gccctgaatccggacgttcgtatggagagtaaagacagacagagcgccggttatgaagtt
taccacgagaaactggtgtttttcgctcaagacgtggggtccaataagggggctgttatc
gggctcatggttggaggcgttgtcatagcaactgtcattgtcattactttggtgatgttg
aggaagaaacagtacacgtccatccatcatggcgtgattgaggtggacgcggcggtgaca
ccagaggagcgccacctcgccaagatgcagcagaacggctacgagaaccccacctataaa
ttctttgagcagatgcagaactga
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