Nothobranchius furzeri (turquoise killifish): 107389910
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Entry
107389910 CDS
T05163
Symbol
chaf1b
Name
(RefSeq) chromatin assembly factor 1 subunit B
KO
K10751
chromatin assembly factor 1 subunit B
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107389910 (chaf1b)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
107389910 (chaf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
CAF-1_p60_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
B-prop_COPA_B_2nd
Beta-prop_EML
WDR90_beta-prop_4th
eIF2A
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
107389910
NCBI-ProteinID:
XP_015821805
UniProt:
A0A8C6NPI3
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Position
sgr14:complement(25725123..25731543)
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AA seq
609 aa
AA seq
DB search
MKVVTCEIAWHNKEPVYSLDFQHSSDGRFHRLATAGVDTTVRLWQVDTGADGKAAVDFLS
NLARHTKAVNVVRFSPSGELLASGGDDAAIFLWKLNESKEPEQAPVFQEEEDAQLNKESW
SVVKTLRGHIEDVYDICWTRDGNFMVSGSVDNTAIMWDVNKGQKLCIFNDHKSYVQGVTW
DPLGQYVATLSCDRAMRVYSTHTKKKAFCVSKMSPSSPAEGESKQYRMFHDDSMRSFFRR
LSFTPDGSFLLAPAGCVEVGENIINTTYIFSRKSLKRPIAHLPCPSKATLAVRCCPLYFE
LRTKRGDDGSTQALPNLFQLPYRMVFAVASEDSIFLYDTQQSLPFGLVSNIHYHTLSDLT
WSRDGSFLAVSSTDGYCSFLSFSPGELGTPLKEPPTLEVFVPSSGSEKKGKKASGAKNSS
PVSQTLSSTPNPTCQTSCGKDTPCHTPPDEKKSTPKIKPKPQPRRITLNTLEGWGKPSSP
KTPSSTQTRDSGSAPSTPPPRSVPLTPTNSSSKQPRVVPLTPSTPNVNTAGSTTPKAATT
PKGPTSRRVSLTRVGPQPSAVCSLFNGPSSTEKAKHERPSPPTDPVCQPPESKRPKTSSN
PPKTGVNKD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtagtaacgtgtgagatagcatggcacaacaaggagccggtttacagcctggac
tttcagcacagctctgacggacgctttcatcgcctcgccacagctggagtggacaccaca
gtcaggctgtggcaggtggacaccggtgcagatggaaaagcagcagtagattttctgtct
aacctggccagacacaccaaggctgtcaacgtggtccgctttagccccagtggagagctg
cttgcttcaggaggagatgatgcagcaattttcttatggaaactcaatgaatctaaagag
cctgagcaagctccagtcttccaagaggaggaagatgcccagctcaataaagagagttgg
tctgtggtcaaaacactgagaggacacatagaggacgtgtatgacatctgctggacaaga
gatggcaacttcatggtttctggttctgttgacaacactgccatcatgtgggacgttaac
aaaggacagaagttgtgcatctttaacgaccataagagctacgttcagggggtcacctgg
gatcctttgggtcaatatgtggccactctcagttgtgaccgagcgatgcgcgtgtacagc
actcacacgaagaagaaggccttctgcgtcagtaaaatgagccccagttcacctgcagaa
ggagagtccaagcagtacaggatgttccacgatgacagcatgaggtcgttcttccgtcgt
ctctcgtttacacccgacgggtcgttcctgcttgccccagctggatgcgtggaggtggga
gaaaacatcataaacaccacttacatcttttccaggaaaagtcttaagagacctatcgct
cacctgccgtgtccgtctaaagccacgttggctgtgcgctgctgcccgctctactttgaa
ctcagaactaaaaggggagacgacggttcgacccaggctcttcccaacttgttccagctg
ccgtaccgtatggtgtttgccgtggcctcggaggactccatatttctgtatgacacacag
cagagccttccgtttgggctggtgtccaacatccactaccacacactcagcgacctgaca
tggtctcgggatggttccttcctggccgtctcctccacagacggttactgctccttcctg
tccttctctccaggggagttgggcactccactgaaggagccccccaccttggaggtcttt
gtcccaagcagtggttctgaaaagaaaggaaagaaggcatcaggggctaaaaactcctct
cctgtgtcccagacactgagctcgaccccaaatcccacatgtcaaaccagctgtggcaag
gacaccccctgccacaccccaccagacgaaaagaagagcacacctaaaatcaaacccaaa
ccccagccccgtcggatcaccctcaacaccctggagggttgggggaaacccagttctcct
aaaactccctcctcgactcaaacccgagactccggtagcgcaccctcgactcccccacct
cgctcggttccgctcacccccaccaactcctcctcaaagcagcctcgtgttgttcccctc
actccgtccacaccaaatgttaatactgctgggtccaccacccccaaggctgcaaccacc
ccaaaaggacccacctcaagaagagtgtctctgactcgtgttggaccccaaccttcagct
gtttgttcacttttcaacggtccttcctccacagagaaggccaaacatgagcgtccctct
cctcccaccgatccggtgtgccagcctccagaatctaaacgacccaagaccagctccaac
ccaccgaagaccggtgtcaataaggattag
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