Nothobranchius furzeri (turquoise killifish): 107389952
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Entry
107389952 CDS
T05163
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107389952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107389952
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107389952
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107389952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
TRIM_CC
zf-RING_2
zf-C3HC4_3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-RING_5
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
107389952
NCBI-ProteinID:
XP_015821867
UniProt:
A0A8C6LDQ2
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All DBs
Position
sgr14:26641927..26684222
Genome browser
AA seq
691 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSIGAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPNETRRERVAPEKTAMTSPSDPVQ
CQFCEQDPPQDAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLVEPSLDSHLRGFMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALADRFDKLKTSPLHRHFLCEGHGQAYQ
DADQQALDSNLSNLIKRTSELESLMGKLIQTCQNVEVNASRQENKLLEECDLLINIIQQR
RQIIATKIKEGKDIRLRKLAQQIAGCKQCIERSSSLITQADHTLKETNHTHFLQSAKSIC
ERVSMATASSQILLPEINLIDAFDTFALDFTREKKMLESLDYLTAPNPPVIREELCTASY
DTITVHWTSDDEFSVVSYELQYAIFTSQANVVSLCNSVDSWMIVPNIKQNQYTVHGLQCG
TRYIFIVKAINQAGNRCSAPGKLKTNSQPFKLDPKSAHRKLRVSHDNLTVERDETSSKKS
HSQERFSSHSSYGVTGNVYIDSGRHYWEALIGGSTWFAVGITYKSAPKHEWVGKNAASWV
LSRCNNSWAVRHNSKEIPIDSSQHLRRLGVLLDYDSGSLSFYDAVGSQHLYTFDITFSQP
VCPVFNVWNRCLTIVSGLPIPDYLEDTDYNN
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgctggagtctgagctgacctgcccaatctgtctggagcttttcgaggacccg
ctgctcttgccctgcgctcatagtctttgtttcaactgtgcccatcgaatcctggtctcc
cactgcacccccagcgagcccattcagtctatcggcgccttccagtgtccaacctgtcgc
tatgtcatcaccctcaaccagaggggcctagagggactgaaacgcaacgtgaccctgcag
aacatcatcgaccgctaccagaaagcctctctgagcggacccaactctcctaacgagact
cgcagggagcgagtcgcccccgagaagacagccatgacgtctccctctgacccggtgcag
tgtcagttctgcgagcaggaccctccgcaggacgccgtgaagacctgcgtcacctgcgag
gtgtcatactgcgaggagtgcctcaaggccacccacccgaataagaagcctttcacgggc
caccggctggtcgagccctcgctggactctcatctgcgagggttcatgtgtctggagcat
gaggacgagaaggtcaacatgtactgcgtaacggatgaacagctgatctgcgctttgtgc
aagctcgttggccgacatcgagaccaccaagtagcagccctcgccgatcgttttgacaaa
ctcaagacatcgcctcttcatcgccactttctctgtgaggggcatggtcaggcataccag
gatgcagaccagcaagccttggattccaacctcagtaatctaatcaagaggaccagtgag
ttggaaagcttgatggggaagcttatccaaacctgccagaatgtggaggtaaatgcgtct
cggcaggaaaacaagctgctggaggagtgtgacctgctgattaatatcatacagcagcgg
agacagatcatagcgaccaagataaaggagggaaaggacataaggctgaggaagctggcg
cagcagatagccggctgtaagcagtgcatcgagaggtcctcctctctcatcacccaggct
gaccatacgctgaaggagaccaaccacactcacttccttcagtcggctaaaagcatctgt
gagagagtgtcaatggcaacggcgtcctcacaaatactgttaccagaaataaacctgatt
gatgcctttgatacgtttgctttggacttcacgagggagaagaaaatgttagaaagctta
gattacctgacagcaccaaatccaccggtaattcgtgaggaactatgcacagcctcgtac
gacacgatcacggttcactggacgtcagatgatgagttttctgttgtatcgtatgaactt
cagtacgccatcttcaccagccaagccaacgttgtcagtttatgcaactctgtggacagc
tggatgattgtcccaaacatcaagcagaatcagtacaccgtgcacggactccagtgtggc
accaggtacattttcatagtgaaggccataaaccaggctggaaaccgctgcagcgctcca
ggaaaactcaagaccaacagtcagcccttcaagctggatccaaaatctgctcaccggaaa
ctgcgggtttcccatgacaacctcacagtggagagggatgagacgtcatccaaaaagagc
cacagtcaggagcgcttctccagtcacagcagctatggagtcacaggaaacgtctacatc
gacagcggacgccattactgggaggcgctgataggaggcagcacgtggtttgcagtgggg
atcacttacaagtctgcaccaaaacacgagtgggttggcaaaaacgctgcatcctgggtg
ctgtcccgctgcaacaactcgtgggctgtgcgtcacaacagcaaggagattcccatcgat
tcctctcaacacctgaggcgtctgggtgtgctgttggattacgactcaggatctctgtcc
ttctacgacgccgttggttcccagcacctgtacacgtttgacatcaccttctctcagcca
gtctgccccgtgttcaacgtgtggaacaggtgcctgaccatcgtcagtggactgcccatc
cctgattacctagaggacacggactacaacaactga
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