Nothobranchius furzeri (turquoise killifish): 107390062
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Entry
107390062 CDS
T05163
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107390062
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107390062
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
Lustrin_cystein
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
107390062
NCBI-ProteinID:
XP_015822044
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Position
sgr14:complement(30016118..30047221)
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AA seq
1986 aa
AA seq
DB search
MFLSDFSQVGGQLLSLKLQDEKMEDFLTPPGPDSFRPFTRESLKAIEERIAEEKAKKPKE
KKKRKEFKPKPSHDLEAGKPLSFMYDIPEGLVFKLLEDLDPYYKNQKTFIVVNKGKYIFR
FNATPALWILSPFNLIRKISIKILVHSYFNMLIMCTILINCGFMTLNDPPAWTKNVEYTF
TAIYTGEFLVKVLARGFCVGKFTFLRDPWNWLDFFVIVLAYLTEFSKEVGNLSALRTFRV
LRAFKAISVIPGLKTIVGALFQSVKKLADVMILTVFCLSVFALVGLQLFMGNLRNKCVKD
ADNETLLTESYLKDADNYYNVSGKPLLCGHSSSAGNCPEGYKCLKAGGNPDYGYTSFDTF
GWAFLALFRLMTQDYWEYLYQQTLRVAGKPYMIFFVLVIFLGSFYLVNLILAVVAMAYEE
QCQASIKKAQEKEEEFEAMLEQLKRQQEDAQALAKAALAEGGDGFGKGGATESSSDASKL
SSKSAKERRNRRKKKKDSEEKEVEKIPKSDSLDSIKKARFRFSVDANMLNYDMKCSSMHQ
SFLSFRGPLLSSRRNSKTSFFSFQSQPQDVGSENEFADDENSIFEGTLSRRGSLFHSQRC
DRRTSSMSQCSFLPHLRFQPNSIRHSSVDCNGVVALVDGDSLPSSSPLGFHLPKLSADTT
DTEYREASGQNYGEFLDVLDGPEARQRIHSIASVITSTMEELEESRQKCPPCWYDFAHTF
LIWEFCPCWLKIKKIISLIVMDPFMDLAITICIVLNTLFMAMEHDPMNASFSYMLYVGNL
VFTGIFTAEMVLKLIALDPYYYFQVGWNIFDAVIVCLSLVELCLTNVKGMSILRSFRLLR
VFKLAKSWPTLNKLIKIIGNSVGALGNLTLVLAIVVFIFAVVGMQLFGKSYKDNLEKISQ
DNNLRWHMKDFWHSFLIVFRVLCGEWIETMWDCMEVAGTTKCLILYMMVMVIGNLVVLNL
FLALLLSSFSADNLAAAEDDDTNNLQVAIERIRRGIAFIKSWIRSRCSSSCLRDKKEKKS
EDGSIDKLHMNFGQNGTPNSAIKHFTGNGNGDVTGVDKAGDKYIVYSKSDDSIMSFINNP
SMTVSVPIAAEESDFEMLNTEDFSSASSNLPECNGDGADNDDNDDGRSSSSEGSTVDGMP
PGEIPAIELVFEEIKEPKDCFPAGCVQKYKCCQVNVKKGWWRVWWTIRKTCYRIVEHNWF
ESFIIFMILLSSGALAFEDVNIETRKTVKIMLEYADKVFTVIFILEMLLKWVAYGFAKYF
TNAWCWLDFFIVDVSLVSLVANALEYSDIGAIKSLRTLRALRPLRALSRFEGMRVVVNAL
MGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYGCVNTTTGINYNTSKVQNKSVCMDLA
MEDNNTRWKKIKVNYDNVAMGYLALLQVATFKGWMDIMYAAVDSPSKLSDQPKFEQNFVM
YAYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKP
QKPIPRPSNKFQGFIFDITTKQAFDIVIMVLIWLNMVTMMVETEEDDDRKKQVLKNINLV
FIVIFSGECLMKMIALRQYFFINGWNVFDFIVVILSVAGMFLADLIEKFFVSPTLFRVIR
LARIGRVLRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFAMSNFAYVKREK
GIDDLFNFETFGNSMICLFQITTSAGWDLLLAPILNKDEDCDPEMEHPGSLVKGNCGNPS
IGIAFFVSYIIICFLIVVNMYIAVILENFGVATEESADPLSEDDFEMFYEVWERFDPRAT
QFVTYNLLSDFADSLNPPLRIPKPNKRDLMNMDLPIVSGDRIHCLDILFAFTKRVLGESA
EMDNLRGQMEERFMASNPSKLSYEPITTTFRRKQEETSAAVIQRAFRYYCKSKFTDNFTF
NLKDEKAATEKQGRLKGKQKESAGKTEPTPASASQSTLNSETPKGKHTHKKDKSQKEVTG
KDVGDV
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atgttcctttcagacttttctcaagttggaggccaattactatcgctgaagctgcaggat
gaaaagatggaggatttccttacaccaccaggtccagacagcttccgtccctttacccgt
gagtcccttaaagccatcgaggagcggattgccgaggagaaagccaagaaacctaaagaa
aagaagaaacgcaaggagttcaagcccaaaccaagccatgaccttgaagcgggcaagcct
ctctcttttatgtacgacattcctgaaggcctggtgtttaagttgttggaagacctagat
ccctactacaaaaaccagaaaacttttatagtagtaaataagggtaagtacatttttcgc
ttcaacgccactcctgccttgtggatcctgagtcctttcaatctcataagaaaaatatca
atcaagatcctggtacactcatatttcaacatgttgatcatgtgcaccatcctcatcaac
tgtggattcatgactctaaatgaccctcctgcatggacgaaaaatgtagagtacacattt
actgcaatctacactggtgagttcctagttaaggttctagccagaggattctgtgtaggg
aagttcacgtttctgagagatccctggaactggttggacttctttgtcattgtcctggcg
tatttaacagagttttctaaagaagttggcaatttgtcggctcttcggacgttcagagtg
ctcagagcatttaaggcaatctcagtcatcccaggcttgaagactatcgttggtgccttg
ttccagtcagtaaagaaactcgctgatgtaatgatcctgactgttttctgcttgagcgtc
tttgcacttgtaggattacagctgttcatgggcaatttaaggaataagtgtgtaaaggac
gccgataacgagacattattgactgagagttatctcaaggacgcggataattattataat
gtttctggaaagccattgctttgtggacacagcagttcagctgggaattgcccagagggg
tataaatgccttaaggccggaggtaacccagactatggctacaccagctttgacaccttt
ggttgggccttccttgctttgtttcggctgatgacacaggattactgggaatacctttac
cagcagactttgcgagttgctggaaaaccctacatgatcttttttgtcctggtcatattc
cttggctctttctacttggtcaacttgattttggctgtggtagctatggcctacgaggag
cagtgccaggccagcataaagaaagctcaagagaaagaggaggagtttgaggccatgctt
gagcagctgaaacggcagcaagaggatgctcaggcattagcaaaagcagcattggcagaa
ggtggagatggattcggcaaaggtggggccactgagagttcctctgatgcttccaagctg
agctccaaaagtgccaaagagaggcgcaacagaaggaagaaaaaaaaggattcagaggaa
aaagaagtggaaaaaatccctaaatcagattctctggacagcataaagaaggctcgtttc
agattctctgtggatgcaaacatgctcaactatgacatgaaatgctcatccatgcaccag
tccttcctgagctttcgtggaccgctgctttcatcgagacgaaacagcaagaccagcttt
ttcagtttccaaagccaaccgcaagatgtgggctcagaaaatgagtttgcagatgatgag
aacagcatttttgaaggcaccctgagtcggaggggatccctgtttcattcccagaggtgt
gatcgacgcaccagcagtatgagtcagtgcagcttcttacctcatctccgatttcaacca
aatagtatcaggcacagctctgtagactgcaatggggtagtcgctctagtggatggggat
tcactcccatcatcatcacctttgggattccatctgcctaaattgtcagctgacacaact
gatacagagtacagagaggctagtggacaaaactatggggagtttttggatgtacttgat
ggcccagaagccagacagagaattcacagtatcgctagtgtcataacaagcaccatggaa
gaacttgaagaatcaagacaaaagtgtcctccttgctggtatgactttgctcacaccttc
ctcatctgggagttttgtccatgttggctgaaaatcaagaaaatcattagtcttattgtg
atggaccctttcatggacttggctattaccatctgcattgtcctcaacacattatttatg
gccatggaacatgatccaatgaatgcatcgttcagctacatgttgtatgtgggcaatctg
gtgttcactgggatcttcacagcagaaatggtcctcaagctcatagctttggatccgtac
tattactttcaagtgggctggaatatttttgatgcagttattgtttgtttaagtttggta
gaactttgtttgactaatgtgaagggcatgtccattttgagatcattcagactgctgaga
gttttcaagttggcaaaatcttggcccactcttaacaaactcatcaaaataattggtaat
tcagtgggagctttgggcaaccttaccctggttctggccattgtggttttcatctttgct
gttgtgggcatgcagctgtttggaaaaagctacaaggacaatttggaaaaaatctcacag
gacaataatcttcggtggcacatgaaagacttctggcactcattcctcattgtgttccga
gtgctttgtggagagtggatagagacgatgtgggactgtatggaggtggctgggaccacc
aagtgcctcatcctctacatgatggtcatggttattgggaatcttgtggtgctgaacctg
ttcctggccctgttgctgagttcattcagcgcagacaatctggcggctgcagaagatgac
gacacgaacaatttgcaggttgcaattgaacggattcgcagaggcattgctttcatcaaa
tcatggattagaagtcgctgcagcagttcatgtctcagggataaaaaggagaagaagagt
gaggatggatccatagataaacttcacatgaactttgggcaaaacggtacaccaaacagc
gccatcaaacactttaccgggaatgggaacggagatgtgactggtgtagacaaagctggt
gacaagtacatagtctacagcaagagtgatgactctatcatgtccttcataaacaaccca
agtatgactgttagtgttcctattgctgcagaagagtctgactttgaaatgctcaacact
gaagacttcagcagcgcatcatctaacctgccagaatgtaatggtgatggtgcggacaat
gatgacaatgacgatggccggtccagctcttcagaaggtagcacagtggatggtatgcca
cctggagagataccagccattgaacttgtgtttgaggaaatcaaagaaccgaaggactgc
tttcctgcaggctgtgtgcaaaagtataagtgttgtcaagtgaatgtgaaaaagggctgg
tggagagtgtggtggacaatccgaaaaacctgctatcgaatcgtggagcacaactggttt
gagagtttcatcatcttcatgattttgctcagcagtggagcgctagcttttgaagatgtc
aacattgagacaaggaagaccgttaaaataatgttggagtatgcggacaaagttttcact
gtcatctttattttggagatgctactaaaatgggtggcgtatggatttgccaagtacttc
acaaacgcttggtgctggttggacttctttattgttgatgtttcactggtcagtttggtg
gccaatgctttggagtattctgatattggtgcaatcaagtctctaaggaccctgcgagct
ttgaggcccctaagagccctgtcccggtttgagggcatgagggtggttgtcaatgcctta
atgggagcaattccttccatcttcaatgtgctgttggtgtgtctcatcttctggctcatc
ttcagcatcatgggggtcaacttgtttgcaggaaagttctacggttgtgtcaacacaacc
acaggaatcaattacaacacatcaaaagtgcaaaacaaatcagtctgcatggatttggct
atggaagataataacacccgttggaaaaaaatcaaagtcaactatgataatgttgccatg
ggttaccttgcacttctgcaagttgctacattcaaaggatggatggatatcatgtatgct
gctgtggactctccgagcaaactatcagatcaaccaaagtttgaacaaaactttgtgatg
tatgcatattttgtcatttttattatatttggggcatttttcaccctcaatctcttcatt
ggtgtcattatagacaatttcaatcagcagaagaaaaagtttggaggtcaggacatcttt
atgactgaagaacaaaagaaatactacaatgcaatgaaaaagctgggatccaagaaacca
caaaaacctatccctaggccatcaaacaaattccaaggattcatctttgacataaccaca
aagcaagcctttgatattgtgattatggttctaatatggcttaacatggtaaccatgatg
gtggaaacagaagaagacgatgatagaaagaagcaagtcctgaagaacatcaacctagtg
tttattgtcatcttctctggagaatgtttgatgaagatgattgcacttcgtcagtacttt
ttcatcaatggctggaatgtatttgattttatagtggtcatcctatcagtcgctggcatg
tttctagctgatttgatagagaagttttttgtgtcaccaaccctcttcagggtcatccga
ttggctcgaattggccgtgtcctccgccttattaaaagtgccaaaggaatccgcacactc
ttgtttgccctgatgatgtcacttcctgccttgttcaacattggtctcctgctcttctta
gtgatgtttatctatgccatttttgccatgtcgaactttgcttatgtcaagagagaaaaa
ggcatcgacgaccttttcaattttgaaacctttggcaacagcatgatctgtttgtttcag
attaccacctcagcggggtgggatctccttttagctcccatactcaacaaagacgaggat
tgtgacccagaaatggagcatcctgggagtttagttaaaggaaattgtggaaatccttcc
attggaattgctttctttgtgagttacatcattatctgcttcctcattgtggtgaacatg
tacattgcagtaattctggagaactttggcgtggcgactgaggagagcgccgacccatta
agtgaagatgactttgagatgttctatgaggtctgggagaggtttgatccccgtgcgact
cagtttgttacgtacaatttgctctctgactttgctgacagtctaaacccgccacttcgc
atccccaaacctaacaaaagggacctcatgaatatggatttaccgattgtgagtggggat
cgtatccactgcctggatatcctgtttgccttcacaaaacgtgtcctgggtgagagcgca
gaaatggacaatctgagaggacaaatggaggagcgcttcatggcctcaaatccttccaag
ctgtcgtacgaacccatcaccaccaccttccgccgcaaacaggaagaaacatcagctgcc
gtgattcagagagcattcagatattattgtaagagtaagttcactgacaacttcactttc
aacctgaaagatgaaaaagcggccactgagaaacaaggccgtttgaaaggaaaacagaaa
gaaagtgctggtaaaacagaacccacgcctgcctctgcttcccagtccacgctcaacagt
gagacaccaaaagggaaacacacacacaaaaaagacaaaagccaaaaggaggtcacggga
aaagatgttggagatgtatga
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