Nothobranchius furzeri (turquoise killifish): 107390069
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Entry
107390069 CDS
T05163
Symbol
ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04622
RIG-I-like receptor signaling pathway
nfu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
107390069 (ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107390069 (ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nfu04054
]
107390069 (ifih1)
Enzymes [BR:
nfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107390069 (ifih1)
Pattern recognition receptors [BR:
nfu04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
107390069 (ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-GeneID:
107390069
NCBI-ProteinID:
XP_015822058
UniProt:
A0A1A8A7C1
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All DBs
Position
sgr14:30396850..30412876
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AA seq
991 aa
AA seq
DB search
MEPDRGEEQLAENLRQRLRIMEPDKDEQQEELIKTFRHRLKEKISVGPVLNHLYFISHED
KERILQKLKTEGDASAANQLIDVVLKKPHPEGWFRAFVDALIHGDSKYAAMVLEGSPKPE
EEEENDYCVALVRLLAPSLVQMKTADVCCECFSLGLLGQDDNDKVLAEIDTQGPGRGAGE
LLRRIVRRPPGWFSTFLQVLKKTEHYPLLRELTGDPHWCEQQGHSGAASGQEAVSCDNTV
SMEISVTEEPDNDSTGLYASAEPSKSIDGLPPDLSYSEAAAEAPRSPEKTEIVLRDYQME
VARPALEGKNIIICLPTGSGKTRAAVYITKKHLDSRREAGSPGKVVVLVNKIPLVEQHYS
TEFLPYLKQTYRVERVSGDSQLKISFAKTVQKNDIIICTAQILENYLERAENGEDEGVKM
SDLTLIIIDECHHTQKGGVYNHIMMRYLMQKHKNLRLKKEQKKTVPLPQILGLTASPGVG
GANTVAKAVEHIMRICANLDASEIMTRSQEEDRKQQRKTILTVENKAEDPFGDVIKTIMN
AIHNEAKLSPICDLGSQNYEQWAVQKERQAAKEEDKTVRVCAEFLRRYNEGLILSNTIRM
SDALSYLNKFHEEQIKKKTSVDGEQNIQITDTERFLFKLFKDKKEELETFSKNPKYENDS
LSKLREQILREFSSRGQARGIIFTKTRHSAITLSQWIQENPKFADVEVKPSHVIGGGDQS
DTKPMTAAEQKDVLKKFRAGEVNLLVATTVAEEGLDIPACNFVIRYGLSTNEIAMIQAKG
RGRADDSSYTVVDVKNSGVAERECVNEYREEMMGKAINKIKGQSREAYQKQMMEFQLQAI
MEERMRQVKRKQKAIKDEKPSHVKFSCRNCAKPVCSGEDIQIIENMHRVNVTTQFKELFI
QRENATLQERLLDYETNAVIACKDCGQPWGSVMVYRGMDFPCLHVKNFVVNINGKKISNC
TKWSDLPIRFTAFDYIEHASMMAQGSDEEMG
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgacaggggtgaagagcagctcgctgaaaacttaagacagcgactccggatc
atggagcctgacaaggacgaacagcaagaggagctcattaaaaccttcagacatagactg
aaggaaaagatatcagtggggccggtgctgaaccatttatattttatttcacatgaagat
aaggagcggattttgcagaagctgaagacagagggtgatgcatctgctgcgaaccaactt
attgacgttgtccttaagaaaccacaccctgaaggctggttcagggccttcgtggacgct
ttaatacatggagattcgaaatacgctgctatggtcttggaaggctctcctaaacccgag
gaagaggaagagaatgactactgtgtagcacttgtgaggttactggctccaagtcttgtt
caaatgaagacagctgacgtttgctgtgagtgtttctctctggggctgctcggccaggac
gacaacgacaaggttttagctgaaattgatactcaaggacccggacgtggggccggggaa
cttctgaggagaatcgtgagacgcccacctggatggttctccacatttctacaagttctg
aaaaaaacagaacactatcccctacttagagaactgaccggagacccacattggtgtgag
cagcagggtcattcaggtgcagcttccggtcaggaagcagtgagctgtgacaacacagtg
tctatggagatcagtgtgacagaggagcctgataatgactcaacaggtctgtatgcaagt
gctgaaccgtccaaaagcatagatggcttgcctccagatttaagttactctgaagcagcc
gcagaagcccccagaagccctgaaaaaacagaaattgttcttcgggattatcagatggaa
gtcgctagacctgccttagaggggaagaacattattatatgcctgcctacaggaagtggt
aaaaccagagcagcggtgtacattaccaagaaacatctggacagcaggagggaggcgggg
agcccagggaaggtggttgtcctggtgaacaagattcctctcgtggagcagcattactcc
actgagtttttgccttacttaaagcaaacttaccgagtggagagagtcagtggagactcc
caactcaaaatctctttcgccaagactgtgcagaaaaacgacatcatcatttgcacggcc
cagattctggaaaactatttggagcgggccgagaacggagaggatgaaggggtgaagatg
agtgatctgaccttaatcataatagatgaatgccaccacacgcagaaaggaggagtctac
aaccacataatgatgcgatatttgatgcaaaagcacaagaacttgaggctcaagaaggag
cagaagaagaccgtacccctcccacagatcctaggcttgactgcctcaccgggggttggg
ggagccaacacagtggcgaaggctgtggagcacataatgagaatttgtgcaaacttggac
gcttcagaaatcatgacgagaagccaagaagaagaccggaagcaacaaagaaaaactatt
ctgactgttgaaaacaaagcagaggatcctttcggggatgtcattaagaccatcatgaac
gccattcacaatgaagccaagcttagccccatctgtgacctgggctcgcagaattatgaa
cagtgggctgttcagaaagaacgacaagctgcaaaagaggaggacaagacagtgcgagtc
tgtgcagagttccttcgacggtacaacgagggcctgattctcagcaacaccatccgcatg
agcgatgccctcagttacctgaacaaattccacgaggaacaaatcaagaagaaaacttca
gtcgatggggagcagaacatacagataacagatactgagagattcctcttcaaattgttt
aaagataaaaaggaagagctggagacattctcgaagaatccaaagtatgaaaacgacagc
ctgtcaaaactaagggaacagattctgcgagagttcagctctagaggacaggccagagga
attattttcactaaaacccgacacagtgccatcaccctgagtcagtggattcaagaaaac
cccaagtttgctgatgttgaggtcaaaccttcacatgtcattggaggaggagaccagagt
gacaccaaaccaatgactgctgcggagcagaaggacgtgctgaaaaaattcagagctggt
gaagtcaacctgctggttgccaccaccgtagctgaggaaggtttggacataccagcctgc
aattttgttatccgatacggtctctcaaccaatgagattgctatgatacaggccaaaggc
agaggaagagctgacgacagctcctacactgtggtggatgtaaagaactctggggtggct
gaaagagagtgtgtcaacgagtaccgagaggaaatgatgggaaaagccataaataaaatc
aaaggtcagagtcgagaagcttatcagaaacagatgatggagtttcagcttcaggctata
atggaggagagaatgagacaggtgaagcggaagcagaaggccatcaaggacgaaaagcca
tcgcatgtaaagttcagctgtcgaaactgtgccaaacctgtgtgcagcggtgaagacatc
cagatcattgaaaacatgcacagagtcaatgttaccacacagttcaaggaacttttcatt
cagagagaaaatgccactctccaggagcgacttctggactatgagaccaacgctgtcatc
gcttgcaaagactgtggccagccatggggttcggtgatggtgtaccgtgggatggatttc
ccttgccttcatgtgaaaaactttgtggtgaatatcaacggtaaaaagatcagcaattgc
accaagtggagtgacctccccatcaggtttacggcctttgactacatcgaacatgccagc
atgatggcacagggctcagatgaggaaatgggatga
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