Nothobranchius furzeri (turquoise killifish): 107390111
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Entry
107390111 CDS
T05163
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107390111 (tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nfu01009
]
107390111 (tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107390111 (tra2b)
Protein phosphatases and associated proteins [BR:
nfu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107390111 (tra2b)
Spliceosome [BR:
nfu03041
]
Common components
Common spliceosomal components
SR proteins
107390111 (tra2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107390111
NCBI-ProteinID:
XP_015822142
UniProt:
A0A8C6Q5I9
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All DBs
Position
sgr14:31802325..31806944
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AA seq
279 aa
AA seq
DB search
MEHNSNPPSRIITINKMSDKEQKSRSASRSVSAHGSGKSASRSRSKSWSRSRSRSGSHSH
RGSRRHYSRSRSRSKSYHRRSRSRSHSGERRRRSHSHSPMSNRRRHIGNRANPDPNGCLG
VFGLSLYTTERDLRDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTNDAKEAKERANG
MELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGGGPGGPRRNSRDYDRGYDRGYDRGGY
DRYDDREYYKSYRRRSPSPYYRGTYRSRSRSRSYSPRRY
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaacagtaaccctccatctagaataatcactatcaataaaatgagtgacaaa
gagcagaagtctcgctctgcttccaggagcgtgagcgcacatggttctgggaagtcggct
agtcgctcccgctctaaatcctggtctcgctccaggtccaggtctggatcacattcccac
cgtggctcccgcagacattacagccgctctcggtcccgctccaagtcctatcaccgcaga
tctcgcagtcggtcccacagcggggaacgtcggcgcagaagccatagtcactcccctatg
tccaatcgccgcaggcacattggcaaccgtgctaatccagatccaaacggttgcctggga
gtgtttggcttgagcctgtacaccacagagagggacctaagggacgtcttctctaaatat
ggacccctggcagatgttagcatcgtgtacgaccagcagtcaagacgctccaggggcttc
gcctttgtttactttgagaacacaaacgatgctaaagaggcgaaggagcgtgcgaacggc
atggagctggatggtcgcagaatcagggtggatttctccatcacgaaaagacctcacacc
ccaaccccagggatctacatgggacgacccacgtatggtggaggcggtcccggtgggcca
cggcgcaactcacgtgactatgatcgtggatatgatcgtggttacgacagaggcggctac
gatcgctatgacgacagagaatactacaagtcgtacagacgccgctctccatcgccgtat
tacagaggaacatacaggtctcggtcaagatcacgatcatattccccgcgtcgatattga
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