Nothobranchius furzeri (turquoise killifish): 107390149
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Entry
107390149 CDS
T05163
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107390149 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107390149 (bard1)
04121 Ubiquitin system [BR:
nfu04121
]
107390149 (bard1)
03036 Chromosome and associated proteins [BR:
nfu03036
]
107390149 (bard1)
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107390149 (bard1)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
107390149 (bard1)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107390149 (bard1)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
107390149 (bard1)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
107390149 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
zf-RING_6
Ank_2
Ank_5
Ank_4
Ank_3
BRCT_2
BRCT
zf-RING_5
zf-RING_10
LAL_C2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
107390149
NCBI-ProteinID:
XP_015822193
UniProt:
A0A1A7ZSF8
LinkDB
All DBs
Position
sgr14:complement(35081537..35135073)
Genome browser
AA seq
780 aa
AA seq
DB search
MDENTPQQTSEWKNTKEALANFRKLLVCSKCSNLMKDPVCLGMCEHMLCRSCAGPRAGDG
CVVCHSPAWVKDIQINRQLSSIVEIFCDLESLLNPTKQLDSSEAQTPPENAVVKQKNFKI
WFSPRSRKVRCIVEKPSEVAAAQLRSSAAQSANLSVFNFSSSSQDSSPASPQKDSNANKK
GQKKSKKAAPSNRARAATRTACKQTNQKRKKNRLEAINQQWGITEGEPTPSRQEHPGTDG
VRTSTKRVSFLSSPVTFDEPQLEAPQGNLNEPSSASSTVRDRLSEGEINASNYQTPPGPK
PPANESNPSDSTDKQEIVFSSKRTRAEENKCSLESTPKRPRASPGRGRKSLGRISPAVIE
CLSPPSPGSDRSITVSKELRSSPSVLALALTKSQGKSPRSPGSSVGRLNSGSPAFMKKNH
KGETPLHLAAIKGDVEAVKKLLDQGADPNLKDNAGWTPLHEACNLGHLLVVEVLASGGAL
LNTPGYENDSPLHDAVRNGHAAIVKKLLLLGASQNVLNLHGKRPADYASSQEMLEIFQEA
AKGTQYANSPTSSSPSANLSAVSECVKKDQSLMFLATKLSPSQEHQLAKLGMLLGGRMAD
TFSSSVSHVITPEGQMPTTYSALLGLLAGCWVVKYSWVEACLQAGKWAPEAEHEAGEGPQ
RSRINRCSLLPPLFDGCFFFLLGPFKAPTKDELTKLLREGGGQLLSRQPKPDSDVTQTLS
AAAYHAQPGSDQALCTQYIIYDPQGPYKPAVVRRGKVWSAPSTWVKDCIATFCLLPVPNL
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaatacaccacagcagaccagcgaatggaagaatactaaagaagcgttagca
aacttccgcaagctgctagtttgttctaaatgctctaatttgatgaaggatccggtctgt
ctgggcatgtgtgagcatatgctgtgcaggtcttgtgctggcccccgggcaggagatggc
tgcgtggtgtgtcacagccctgcgtgggtgaaggacatccaaatcaacaggcagctgagc
agcatcgtggagatcttctgtgatttagagtccctgctcaatccaaccaaacagctcgat
tcgtctgaggcccaaacaccgcctgagaatgctgttgtgaaacagaagaactttaagatt
tggttcagtcctcgcagtcgaaaggtgcgctgcattgtggagaagccttctgaggtagcc
gcggcacagctgcgctccagtgctgctcagagcgcaaacctgtccgtttttaattttagt
tcgtcctctcaagactcgtctcctgcttctcctcaaaaagacagcaatgcaaacaaaaag
ggacagaaaaagtctaagaaggctgctcctagcaaccgcgcgcgagccgccacgaggacc
gcgtgtaaacagactaatcagaaaaggaagaaaaataggctggaggccataaaccagcag
tggggaattacagaaggagaacctactccatccagacaggagcatcccggtactgatgga
gtaagaacgtccactaaaagggtgtctttcctaagctctcctgtcacctttgatgagcct
cagcttgaagcgccacagggtaatttaaatgagcccagctctgccagcagcacagttaga
gaccgcctctcagaaggtgagataaatgcatcaaattaccaaactccgcctggtccaaag
ccacctgcaaatgaatccaatccaagtgacagtactgataaacaggaaattgtattttct
tcaaaaagaaccagagcggaggagaacaagtgctcgttggagagtacaccaaaaaggccg
agggcttctccgggccgaggaagaaaatcactgggtcgcatatctccagctgtcatcgag
tgtttatccccaccgagccccgggagtgataggagcataacagtctctaaagagttaagg
agcagtccctccgttttagcacttgctttgacaaaaagccagggcaaatctccacgtagt
ccgggatcatctgtcggacggctgaactctggcagtccggcgtttatgaagaagaaccac
aagggagagactccactgcatctggctgcaataaagggagatgtagaggctgtcaagaag
ctgctggaccagggagctgaccccaacctgaaggacaatgctgggtggacacctttgcat
gaagcatgtaaccttggccacctgctagttgtggaggtgctggcatcaggaggagcttta
ttgaacacgcctggttatgaaaatgactcgccgctccatgatgcagtgaggaacggacat
gcagccattgttaaaaagctgctgctgctcggggcctcacagaatgtgcttaatctgcat
ggaaagcggccagcagattatgcatcaagccaggagatgctggagattttccaagaagct
gcaaaaggaacccagtatgctaattcgcctacatcttctagcccttcagccaatctctca
gcggtgagcgaatgtgtgaagaaggatcagtctttgatgtttttggccaccaagctgtca
ccgtcccaggagcatcagctggccaaactaggaatgctactgggagggaggatggcggac
accttttcaagctcagtgagccatgttatcacaccagaaggacaaatgcccaccacctac
tccgccctcctgggtcttcttgctggctgctgggttgtcaagtacagctgggtggaggca
tgtctgcaggcggggaagtgggcgcctgaagctgagcatgaagcgggagaaggccctcag
cgcagtcgcatcaacagatgtagtttgctcccgcctctcttcgacggctgtttcttcttc
ctcctcggaccctttaaggcgccgaccaaagacgagctcaccaagctgctgagggaagga
ggcggccagctcctgagccggcagccgaagccagacagcgacgtgacacaaaccctaagt
gcagcagcttaccacgcccagccgggctctgaccaggccctctgcacccagtacatcatc
tacgacccgcagggaccttacaagcccgcagtagtcagacggggaaaggtgtggtctgct
ccgtccacctgggtgaaggactgcatcgctaccttctgcctcctcccggtgccgaacctt
taa
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