Nothobranchius furzeri (turquoise killifish): 107390207
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Entry
107390207 CDS
T05163
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1 isoform X1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107390207 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfu03021
]
107390207 (gtf2e1)
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
107390207 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
107390207 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
DUF3105
DUF1272
Zn_ribbon_15
Motif
Other DBs
NCBI-GeneID:
107390207
NCBI-ProteinID:
XP_015822284
UniProt:
A0A1A8U3E5
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All DBs
Position
sgr14:complement(38626442..38637946)
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AA seq
442 aa
AA seq
DB search
MIEPELLTEVPASLKRLAKQVVRGFYGVEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKSDKFVKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCFSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDASVCPAGRTLVARFNE
QIEPIYQLLSKTEDINLSHDLLEPEPTEIPALKRRERATASGNPEGGPHREAWANKGSAY
ADLYTQNVVINMEEQNDQQKQINRDKAPKEQPIWLTQSTVQGAYNELDSIKTCGEVMSGA
QDGMTGHGTGQADENEEVMRALLIHEKRAVTGAGVGGASSAVRGLASAKANASDSESDTS
ESDDEFPPGPPAAAASQRRAEEDEEDEDDFEEVGDEPMVMVGGRPFSCREVSQRPELVEQ
MSVQEKEAYIEMGQNLFQDMYF
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgattgagccagagcttctaaccgaggtccctgcttcactgaagaggctagctaagcag
gttgtgaggggattttatggtgtagagcatgccttggccctggatgtgctcattcgcaac
ccttgtgtgcgggaggaggacatgctggagctgctcaagtttgaccggaaacagctgcgc
tctgtgctcaacactctgaaatcagacaaatttgtaaagtgccgcatgagagtggagacg
gcccctgatggcaaaacaacgcgacacaactactattttatcaactacaggctattggtc
aatgttgtaaagtacaaactggatcacatgcgaagacgcatcgagacggatgagcgagac
tctactaaccgggcctcctttaggtgcccctgctgcttctctacgttcactgacctggag
gcgaatcagctgtttgatcctatgacgggtacttttcgctgcacattttgccagactgag
gtggaagaagatgcgtctgtgtgtcctgctggcaggacgctggtggcccgcttcaatgag
caaatcgagcccatctatcaactcttaagtaaaactgaagacatcaacttgtctcatgat
ctgctggagcccgagcccacagagatccctgctctcaaacgtagagaacgtgccacagcc
tctggaaacccagagggcggaccgcatcgggaagcctgggcaaacaaaggatcggcttac
gctgacttgtacacacagaatgtggtcatcaatatggaggagcagaatgatcaacagaag
cagatcaatcgggacaaagcacctaaggaacagcccatctggttgacccagagcacagtt
cagggtgcttacaatgagctggactccatcaagacctgtggagaggtgatgtctggagcc
caggatggaatgacgggtcatggaacaggtcaagccgatgaaaatgaggaagtgatgcgc
gccctgctcatccacgagaagagggctgtcacaggggcaggtgtgggcggagccagctct
gctgtcaggggtctcgcctccgctaaagctaatgctagtgactcggagagcgacaccagt
gaatcagatgacgagtttcccccgggccctccagctgctgcagcctctcagcgccgtgct
gaagaagacgaggaggatgaagacgactttgaggaggtgggggatgagcccatggtgatg
gtggggggtcggccgttctcctgcagggaggtgagccaaagacctgagctggtggagcag
atgtctgtgcaggagaaggaggcgtacatcgagatgggacaaaacctcttccaggacatg
tacttctga
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integrated database retrieval system
