Nothobranchius furzeri (turquoise killifish): 107390253
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Entry
107390253 CDS
T05163
Name
(RefSeq) integrin alpha-3-like
KO
K06482
integrin alpha 3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04810
Regulation of actin cytoskeleton
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107390253
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107390253
09142 Cell motility
04820 Cytoskeleton in muscle cells
107390253
04810 Regulation of actin cytoskeleton
107390253
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107390253
04515 Cell adhesion molecules [BR:
nfu04515
]
107390253
04090 CD molecules [BR:
nfu04090
]
107390253
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107390253
Cell adhesion molecules [BR:
nfu04515
]
Integrins
Integrin alpha subunits
107390253
CD molecules [BR:
nfu04090
]
Proteins
107390253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
107390253
NCBI-ProteinID:
XP_015822349
LinkDB
All DBs
Position
sgr14:complement(43922045..43968797)
Genome browser
AA seq
1144 aa
AA seq
DB search
MATGVCVVLSLCAGFCFAFNLDTSFPVLKRGEGGSLFGFSVTLHKDMKTGSHLLLIGAPR
DWAEPNVPANRTGGVYSCPITADHLDCTRMKVVNPNLNPSKNLVEDMWLGVSVASQGGPS
GRVLACAHRFVKLSSAFKHSQVGQCYLSGDDLLKDYSISSWHRLDQLCNHEQNEAGQGMC
NLGISTFMSDTELIFGSPGSYHWQGSVHVVWTETDIQKNFFPNQHQRNIYLGYSVTQAHC
LLSVDDVTIVTGAPRDNKEDARGSVLLLTKRSDELLIRQTLRGQQVGSYFGNAVATSDLN
NDGWTDLLVGAPFYYGRQPEVGGAVYVYMNAGGRFAAEPSVTLMGPVGSAFGMAVIAAGD
LNQDGFQDFAVGAPFHDTGSVMIWTGSSEGITTEPSQVIQGSSLFSGFRTFGYSLAAGLD
VDGNKYPDLLVGSLDDTVALLRSRPVVHLNRSLRVSPDIVHPNSCDFCIKVEVCFSFKLS
ITEKAKTNITVYFTVTADVTSLKPRLHFYENGETVYSSSLSLKKRMCKTLKVGLLIPVQN
KVKPLVFSLNVTLNEKLPEKGNIVQDLRQFPVLSRTPQPIRTQIHIQKACGSDNRCHCNL
QMTTQFMDLNQNPFTKVNGSSVLVYNSSIRWFLLEVNISNTPSAGRPAEDAHNAVLNISI
PPALSYSGVIPKAVMMDYNLSIGCVFVFQEDNSTLTDCSVEDTSVVCQLGNPFKSKQKDQ
LLIKFQPTKMILDTKEIRSLLQLSTLSEQSDLAPVYVSMLVENSLQASLILSNPPGPVFF
SGQVIGEQAVKNMEDIGSLVVFTLQVHIDRESPGYHGNLEVEFDWPKEVANGKWLLYLTE
IRLDGASSSRCTQSEINPLNLLVSHERKSMRRSLKGQQVEDAKEEEKGRELPAFSVWGHK
NSYKLNCTDGAKCVKLSCPLLDTDNAAFVTVHSRLWNSTMIEVKTLSSKFRLMVTSCLHL
IPRSSKQNTTSSKRQAGCHETKSTKHNGNRTHHQMKKTRLYSGLCWDVAACLCITTLWWL
PGWLPLCSQTLIFQDFSDARSILVQVQATLKLSTKLMTTLTSYPSLIEVYIYPDSALQLY
SGAHLWIIIMSVLAGVLLLALICLLLWKCGFFKRTSTRELYQAKIQRACRKNQPSDRDKL
TKEL
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaggtgtgtgcgtggtactgagtctatgtgctggtttttgttttgcgtttaat
ctggacacatcgttcccagttctgaagaggggtgaaggtggaagtctttttggattttct
gtcactctgcacaaggacatgaagacaggaagtcacctactgttgattggagctcccagg
gactgggcggagcctaatgttccagccaaccgaacaggaggagtgtacagctgcccaatc
actgctgaccatttagattgcacaaggatgaaagttgtgaacccaaatctgaacccttct
aaaaacttggttgaggacatgtggctgggcgtctcagtagccagtcagggtggacccagt
gggagggttctggcatgtgctcatcggtttgtgaaactctccagtgcctttaagcacagt
caggtcggccagtgttatctcagtggggatgacctgctgaaagactacagcatctccagc
tggcacagactagaccagctttgcaaccatgagcagaatgaagccggtcagggaatgtgt
aacttgggaatctctaccttcatgagcgacactgaactcatctttggctcacctggaagc
taccactggcaaggaagtgtccatgttgtctggaccgagacagacattcagaagaacttc
tttcccaatcagcaccaaagaaacatttatttaggatattcagtcactcaggctcattgt
cttctgtctgtggacgatgtaaccatagtaacaggagctcccagagacaacaaagaggat
gctcgaggttctgtgctgttgctcaccaagcggtccgatgagctgttgattcggcagacc
ctgcgcggtcagcaggttggttcttactttggtaacgccgtggcaacctctgacctcaac
aatgatggctggactgacctgctggtgggcgctcctttttactatggtcgtcagcctgag
gtgggtggggcagtttatgtctacatgaatgctgggggaaggtttgccgctgaacctagc
gttacgctaatgggtcctgttggatctgcttttggaatggctgtcattgctgcaggagac
ctgaaccaagatgggtttcaggactttgcagtaggtgcccctttccatgatacaggaagt
gtaatgatctggactgggagcagtgaggggatcactacagaaccaagccaggtgatccag
ggcagcagcctgttttctggtttcaggacttttgggtactctctggctgcaggactggat
gttgatgggaacaaatatccagatctgctggtcggctcactggatgacacagtcgctctc
ctcagatctcgcccagtagttcacctaaacagatcgctcagagtttctccagacatcgtc
cacccaaacagctgtgacttctgcattaaggtggaggtctgcttctccttcaagctcagc
atcacagagaaagctaagaccaacatcactgtctatttcactgtgactgctgatgtcacc
agcctcaagccccgcctccatttctatgaaaatggagagaccgtgtactcaagctcactg
tcactgaaaaaaagaatgtgtaaaactcttaaagttgggctgctgattccagtccaaaac
aaagtgaaacctctggtattctcacttaatgtcactttaaatgagaagcttcctgaaaaa
gggaacattgttcaagatctgaggcaattccccgttctcagccggactcctcaacccatc
agaacccagattcacatccagaaggcctgcggctctgacaaccgttgccattgtaacctc
cagatgacaacccagttcatggatctgaaccagaaccccttcaccaaggtgaatggcagc
tcagtgctggtttacaacagcagcatcaggtggttcctcttggaggttaacatcagcaac
acaccctcagcaggccggccggcagaggatgctcacaatgctgtcctaaacatcagcata
ccaccagccctctcctactctggagtcataccaaaggcagtgatgatggattataatctg
agtattggatgtgtgtttgtgtttcaggaggataattcaacactgactgactgttctgtt
gaagacacgtctgttgtgtgtcagctgggcaatcctttcaaaagcaaacagaaggatcag
cttttgatcaagtttcaaccaactaagatgattttggacaccaaggagatacggtctctg
ctgcagctgtccacgctcagtgagcagtcagatctggctccggtctatgtctccatgctg
gtggagaactcactccaggcatctctcattttaagcaacccacctggcccagtcttcttt
agtggtcaagtgattggcgagcaagccgtgaagaacatggaggacatcggcagtctggtg
gttttcaccctccaggtgcatatcgacagggagtcaccaggttaccatggcaacctggaa
gtggagtttgattggccaaaagaggtggccaatggaaagtggttgctgtacctcacagaa
atccgattggatggtgcctcaagttctcgctgcactcagtctgagatcaatcccctcaac
cttttggtgtcacatgaaaggaagagcatgaggaggagtctgaaaggacagcaagtagaa
gatgcaaaggaggaagaaaaagggagagagcttccagctttcagtgtatggggacacaag
aactcatacaaactgaactgcactgatggagcgaaatgtgtgaaactgtcttgtcctctg
ctcgacacggacaacgctgcatttgtgacggtccacagccgactgtggaactccaccatg
attgaggtaaaaacattaagctccaagttcagattgatggtcacttcctgtttacatctc
atcccaagaagcagcaaacaaaacacaacctcctcaaaaagacaagcaggatgccacgaa
acaaaaagcacaaaacataacggaaacaggacacatcatcaaatgaagaaaaccagactt
tacagtggactctgctgggatgttgcagcttgtttatgcattacaaccctctggtggcta
ccaggatggttgcctctttgcagtcagactcttatctttcaggacttcagtgatgccagg
agtattttggtccaagtccaggctactctgaagctgagcaccaaactaatgaccaccctg
acatcctacccatcactgattgaggtttacatttacccagactctgcactgcagctgtac
tctggtgcccacctatggatcatcataatgtcggtcctggctggagtactgcttctggcc
ctgatctgcctgcttctctggaagtgtggcttcttcaagagaaccagcaccagggagctg
taccaggccaagatccaaagagcctgcaggaagaaccagccgtctgacagagacaagctg
acgaaggagctctga
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integrated database retrieval system
