Nothobranchius furzeri (turquoise killifish): 107390311
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Entry
107390311 CDS
T05163
Symbol
clcnka
Name
(RefSeq) chloride channel protein ClC-Ka
KO
K05017
chloride channel Ka
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107390311 (clcnka)
Ion channels [BR:
nfu04040
]
Chloride channels
Chloride channel (CLC)
107390311 (clcnka)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
Motif
Other DBs
NCBI-GeneID:
107390311
NCBI-ProteinID:
XP_015822431
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Position
sgr15:9410464..9426471
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AA seq
679 aa
AA seq
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MQQRSFTTQKCGLASSSVAFYFDLHRSFPFVCRKTVLTAFVFKAWLLKLKTCLGSVCGIE
WYGYAALGILTAILSFLMDLSVAKLLKAHQWLFLNLEGNVLLQFLCWSLYPACLCAFAST
FSHNICPYSTGSGIPEVRTMIAGSEMPHYLSLTHLFTKFLGLICTLAAGTTVFLGKVGPF
VHLSTMVGAYLDNLCSFIQGGKKEQGATGMLAVAAGVGVASCFGAPVSGVLFSVEVMCSH
FALRHYCPCFFSATCGALTFHLLSMWSRDGETLQALFKTNFPTALPFHPLEILLFVLLGL
LCGAVSCCYLFCHRWILKFTKTNTVVLKMLTTEKGLYSGLVVFCLASLTFPHSAGQYMAS
KYTMKDLLTSLLDSRQWSSHNASVQLDPSLEWHSSGTSIFLSLTFFLLMKMWMLILACTL
PQPAGYFMPVFIYGAALGRLLGEGVVFVSSNGTIFGHQWTSVNPGGYALAGAAAFSGAVT
HTLSPALLAVELTGQFSHAVPILLSTLVANALAQSGDRPSFYDALSISKKLPHLPSLKKA
CPRLPSTPIGQVLGVRSVQLQKAAGPAEVQCAVSTSTEAQIPVVDSHESQILLGFVLRSE
LQVFLHRCKTQKLEVNLDEVCTIHPTSTLLSPHNTVEEAYGLLNVAGAQTLFVTDGGRYI
GHITWPEMKLILESLAAEL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagaggtcatttaccacccagaaatgtggtttagcatcgtcatcggtggcattt
tactttgacctccatcgttcctttccttttgtgtgtcgaaaaaccgttttaaccgctttt
gtgtttaaagcttggcttttgaagctgaagacgtgtttgggatctgtgtgtgggattgag
tggtacggctatgctgctctgggcattttgaccgccatcctgagttttctgatggacctt
agtgtggcaaaattattgaaagctcaccagtggctttttctgaacctggagggaaatgtg
ttgctgcagttcctttgctggtctctttacccagcatgcctctgtgcttttgcatcaaca
ttctcccataacatctgtccctattccacaggctctgggatacctgaagtcagaaccatg
atagctggcagcgaaatgccccattacttgtctctaacacacctgtttaccaagttcctg
ggccttatctgcacactggcagctggcaccactgtttttcttggcaaagtgggtccattt
gtgcatctctccaccatggtaggagcctacctggacaacctctgctctttcatacaaggt
ggcaagaaggagcaaggagccacaggaatgttggcagtagctgctggagttggagtggcc
agttgctttggagcgccagtcagtggtgtactgttcagtgtggaggtcatgtgctctcac
tttgccctgaggcattactgcccgtgtttcttctcggccacctgcggcgctctgaccttt
cacctcctctccatgtggagcagagatggagagactcttcaggcgttgttcaaaaccaat
ttccccaccgctttaccatttcacccactggagattctgctgtttgttcttctggggctg
ctgtgtggagctgtgagctgctgctacctcttctgtcatcgctggatcctgaagtttacc
aaaacaaacacagtcgtgcttaagatgctgacgacagagaagggtctgtactccggcctg
gtggtcttctgtctggcatcgctgacctttcctcactctgctggtcaatacatggcttct
aagtacaccatgaaggacctcctcacttccctgttggacagcaggcagtggagctcccat
aatgcatctgtgcaactagatccatcgctggagtggcattcatcgggcacttccattttc
ctgtctttgactttctttctgctcatgaagatgtggatgttgatcctcgcctgcactctg
cctcagccagccgggtacttcatgccagtgttcatctacggagcggctttgggccgtttg
ctcggtgaaggagtcgtttttgtgtcctccaatgggacgatttttggacatcagtggaca
tctgtaaatcccggtggatatgcacttgctggagcggctgccttctctggtgctgtaact
cacactctgtccccggctctcctagctgtagagttaacgggtcagttcagccacgctgtg
cccatcctcctctccactcttgtggctaacgccttagcacagtctggggaccgcccatcc
ttttacgacgccctctccatcagtaagaagctcccacacctgccgtctctgaagaaggcg
tgccctcgacttccctccacacccattgggcaggttctgggagtaagatcagtgcagctc
cagaaagcagctgggccagcggaggttcagtgtgctgtcagcaccagcactgaagcacaa
atccctgtggtggactcacacgaatcccagattctgctggggtttgtccttcgatcagag
ctgcaggtgttcctgcatcgctgtaagactcagaagctggaagtaaatctggatgaagtc
tgcactatacacccgacctccaccctgttatcacctcacaacacagttgaggaggcctac
ggtttactgaatgtagctggagctcagactctgtttgtgactgacggaggacgatacatc
ggacacatcacatggccagagatgaagctgattttagaaagcctggctgctgaactctaa
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