Nothobranchius furzeri (turquoise killifish): 107390593
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Entry
107390593 CDS
T05163
Symbol
srsf6
Name
(RefSeq) serine/arginine-rich splicing factor 6 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040
Spliceosome
nfu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107390593 (srsf6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107390593 (srsf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107390593 (srsf6)
Spliceosome [BR:
nfu03041
]
Common components
Common spliceosomal components
SR proteins
107390593 (srsf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
DbpA
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107390593
NCBI-ProteinID:
XP_015822895
UniProt:
A0A9D2XWZ9
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All DBs
Position
sgr15:complement(12614838..12619126)
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AA seq
385 aa
AA seq
DB search
MPRVYIGRLSYHVREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVIVEHARGPRRDRDSYSGGGGYWGGGRSGGGGGGGGYSSGGGGGGGGGGGSRSRTG
RDKYGPPVRTEYRLVVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSD
MKRAMDKLDGTDINGRKIRLVEDKPRRRRSYSGSRSRSRSRRRSRSRSHRSSRSRSRSHS
SSKRHHSRSRSGRKSRSKSGERKSRSRTKRSRSRSQKSKSRSPSHKSRSRSADRKSKSRS
KSRSKVKSERDSRSRSKERSSDKKSRSRSVSPVENGKAERATKSASRSPSPRDGGRRSKS
REKRSASRSVSRSRSRSRSRSASQE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagtttatattggacggttgagttaccatgtccgtgagaaagatatccagcga
tttttcagcggttatggtaaattaatggaaattgatttgaaaaatgggtatgggttcgtg
gagtttgaggacaaccgagatgccgacgatgccgtgtacgagctgaacgggaaggagctg
tgcggagagcgggtgatcgttgagcatgcccgggggccgcgccgtgaccgagacagctac
agcggcggtgggggttactggggtggtggacgcagtggtggtggaggaggtggtggtggt
tatagcagcggtggcggcggcggcggtggtggcggcggcggcagcaggagccgcactggt
cgggataaatatggacctccagttcgtactgagtaccgtcttgttgtggagaacttgtcc
agtcgctgtagctggcaggatctcaaggacttcatgcgtcaggcgggagaggtgacttac
gcagacgctcacaaggagcgcaccaatgagggagtgattgagttcaggtcctactctgac
atgaagagggctatggacaagctggatggtacagacatcaatgggcgcaagattcgtttg
gtggaggataaaccccgccgtcgtaggtcttactccggtagccgctccagatcccgtagc
cgccgccgctctcgaagcagaagccacaggagctccaggagtcgctccagatcgcactct
agcagcaagaggcaccactcccgctccagatctggaaggaagtctcgctccaaatcagga
gaaaggaaatcacggtctcgcaccaaaagatctcgttctcgctcccagaagtctaaatct
cgttcaccctctcacaagtctcgttctcgttcagctgaccgcaaatctaagtctcgctct
aaaagtcgttccaaggtaaagtctgaacgggattcccgtagtaggtcgaaggaaaggtcc
agtgacaagaagtcccgcagccgttcagtgtcccctgttgaaaatggaaaagcagagcgt
gccaccaagtctgcgtcccgctccccatcaccacgagatgggggtcgccggtcaaagtcc
agggagaagcgttccgcatctcgttcagtgtcccgctctaggtctcgctctcggtccaga
tcagcctctcaggaatag
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