Nothobranchius furzeri (turquoise killifish): 107390796
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Entry
107390796 CDS
T05163
Symbol
sort1
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107390796 (sort1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
107390796
NCBI-ProteinID:
XP_015823210
UniProt:
A0A1A8U6R0
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Position
sgr15:17914210..17929523
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AA seq
822 aa
AA seq
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MGPLLYGLLLVSVCTFSTGLDFQRELKPLGLSVFERRTERAAKIVKRSLPSSWLAASPNH
KIQRRSSDSGESCQQHQGYKPKLDDNTHSFKFDDLSGSVSLAWVGDGTGVILALTTFQVP
LFMLRFGQSRLYRSENYGKSFKDVTDLINNTFIRAEFGIAISPDNSGKVILTAEVSGVQE
AQIFVSDDSGKSFRRQSLPLNPMMQISYNPETSNVLMALSISNDLWISQDFGSTWKKIHS
MVCLMKWGRNSTIFFTASQNGSCSDRGMLDLKRTTDYGHTIKTVASKIYSFGLGGRFLFA
SVMTGKGTLRAIQVSVDHGESWNEAQLPPVGHEQFYSILAANDDMVFMHVDEPGDTGFGT
IYVSDYRGTVYSKSLEHHLYTTTGGDTDFTNVTSLRGVFITSVLAEDNSVQSVVSFDQGG
EWVPLQKPANAKCDATAKDPEKCSLHIHAAYSIAMKLNVPVLPLSEPNAVGLILAHGSVG
DAISVMRPDVYVSDDGGYTWLKALDGPHHYAILDSGGLLVAVEKSSNDLINQVKFSTDEG
QCWSVYNFTNEPIYFTGLASEPGARSMSVSIWGYRDAYLAQYWVSFTIDFRELLTRDCED
KDYVEWLAHSDDISDPNDGCMLGYKETFRRLRKDSVCWNGRDYLITKKPDPCPCTLDDFL
CDFGYYRKENSSECVEQPDLKGKVLEFCLQGKEEKLVTTGYRKIPGDKCEGGTMPTRNEI
DLRKKCVSDLVDVQLLKSDGHGSRSAVIVTTVIIVMLLSIAAGVLFVKKYVCGGRFLVHR
YSVLQQHVEDTATAEMDDPLDSNHTQNGKIVFHDDSDEDMLE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgggacccttgctgtatggtctcctgctggtttctgtctgcactttctcaaccggcttg
gatttccagcgggagctgaagccgctcggtctgtcggtttttgagagacgcaccgaaaga
gctgcaaaaatcgtcaagaggtccctgccgtcgtcgtggctggctgcttcgccgaaccac
aagatacagcgaaggagctccgactcgggagagtcgtgtcagcagcatcagggatataaa
cccaagttagatgacaacacccacagttttaagttcgacgacctgagtggctctgtgtca
ctggcctgggttggagatggcacaggggttatcctggctttgacaacttttcaggtgcct
ttattcatgttgaggtttggacagtccaggctctaccgtagtgagaactacgggaagtca
tttaaggacgtgacggacttgatcaacaataccttcatcagagcagagtttggtatcgcg
atcagtcctgataattcaggcaaggtgatcctgacagcggaggtgtctggagtccaggag
gctcagatttttgtctctgatgattctgggaaaagtttccgtcgccagagtttgcctttg
aaccccatgatgcagatttcatacaatcctgagacgtccaatgtgttgatggcgctcagc
atcagtaatgatctatggatttctcaagactttggcagcacctggaagaagatccacagc
atggtgtgtctgatgaaatggggaaggaatagcaccatcttttttacagccagccaaaat
gggtcctgcagtgatcgaggaatgttagacctgaagaggacaacagactacggtcacact
attaagactgtagccagtaagatctactcgtttggtctgggcggacgtttcctcttcgcc
tcggtaatgacgggcaagggaacactgagggccatccaggtgtcggtggaccacggtgag
agttggaacgaggcccagctgccgcctgttggtcacgagcagttctactccatcctagca
gcgaacgatgatatggtcttcatgcacgttgatgagcctggagatacaggattcgggact
atttatgtatcagattaccggggcacggtgtactccaagtccctggaacaccacctttac
accaccactgggggagacacggactttactaacgtcacctccctacggggagttttcatc
accagtgtgctggctgaagataactctgttcagtctgtggtgtccttcgatcagggaggg
gagtgggttcctctgcagaaaccggccaacgcaaagtgtgatgctacagccaaggaccca
gaaaagtgcagtctccacatccacgccgcgtacagcatcgccatgaagctgaatgtcccc
gtgctgcctctgtctgagccaaacgccgtgggtctcattttagctcacggcagcgttggt
gacgctatctcggtgatgcgacctgatgtgtatgtatctgatgacggtggctacacctgg
ctgaaagcgctcgatgggcctcatcactacgccatcctggactcaggagggctgctggtg
gctgtggagaagagcagcaatgacctcatcaatcaggtcaaattttccactgatgaagga
cagtgctggagtgtgtataacttcaccaacgagcccatctatttcaccggtctggcttca
gaaccaggagctcgctccatgagtgtcagcatctggggctacagagatgcctacctggct
caatactgggtctccttcaccattgacttcagggagcttctcaccagagactgtgaggac
aaggattatgtggagtggctggcccactctgatgacatcagtgacccgaatgatggctgc
atgctgggttacaaagagacgtttcggcggctcaggaaagactcggtctgctggaacgga
cgtgattatttgatcaccaaaaagccagatccatgtccttgcaccctggatgacttccta
tgtgactttgggtactaccgtaaagagaacagctctgagtgtgtggagcagccggaccta
aagggtaaagtgttggagttctgtctgcagggcaaagaggagaagctggtaactactggg
tatagaaaaattcctggagataaatgcgaagggggaacaatgcccacacgtaacgagatc
gacctcagaaagaaatgcgtcagtgacctggtggacgtccagctacttaagtcagacggc
catggatcccggtctgcagtcatcgtgaccacggtcatcatcgtcatgctgctgagcatc
gcagcaggagtgctctttgtcaagaaatacgtctgtggcggcaggtttttggtacacaga
tactcagtgctgcagcagcacgttgaggatacagcgacagcagagatggacgacccgctg
gacagcaaccacactcaaaatggaaaaattgtgtttcatgatgattctgatgaggacatg
cttgaatag
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