Nothobranchius furzeri (turquoise killifish): 107390813
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Entry
107390813 CDS
T05163
Name
(RefSeq) homeobox protein MSH-C-like
KO
K09341
homeobox protein MSX
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107390813
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
107390813
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
107390813
NCBI-ProteinID:
XP_015823241
UniProt:
A0A8C6LHX1
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Position
sgr02:4994335..4996383
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AA seq
324 aa
AA seq
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MGTAPVLLIDDRVPARKASGFAESAKTHVGDGTLQQHDTSELAARRCMAPSPCTMMNPGQ
GSPSHDVKQLQTKEETDAEGEDIQPKDMTTEKGYKLQRSCLPFSVESLISKKSTCRTSYS
ASELAVMLPKPPSAQGAQFSPRTCYAESRVSAEGSQGVSRSSDEDSPRFCEKEQSTWFQT
SSFSTPPRSSSPSQCTLRKHKNNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSNSL
NLTETQVKIWFQNRRAKAKRLQEAELEKFKLASKPVLPAFALPFPLGAHMGSPSWGPSNA
FPRPSLPVPGLFSGPVTYGMYYLS
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgggaacagcccctgtccttcttatagacgacagagttcctgcgcgtaaagcttctggt
ttcgctgaaagcgcaaagacgcacgttggagacggaacgctccagcagcacgatacctct
gaactggccgcacggaggtgcatggccccatctccttgtaccatgatgaatcctgggcag
gggtcaccgtcgcatgacgtcaagcagctccaaacgaaggaggagacggacgcagagggc
gaggatatccagcccaaagacatgacaacagagaaaggatacaaactgcagcggagctgc
cttccgtttagtgtcgagtcgttgatttccaagaagagcacctgtcggacttcttactct
gcctctgagttggctgtgatgctgccgaagccgccgtcggcgcagggcgcacagttctct
ccaaggacgtgttacgcagagagtagggtttctgcggagggttcacagggagtttccaga
agttccgacgaggacagtccgaggttttgtgagaaagagcagagcacttggtttcagacg
tcctccttttctacacctcctcggagctcaagtccgtctcagtgtactttaaggaaacac
aaaaataacaggaaacctcgaacgcccttcactacctcacagctgctggccctggagcgc
aagttccgccagaagcagtacctctccatcgccgagagagcggagttctccaactctctc
aacctgacggaaacgcaggtgaagatctggtttcagaaccggagagccaaagccaagaga
ctgcaggaggccgaactggagaagtttaagttggcatcaaagcccgtcctgcccgccttc
gcgctgcctttccccctcggagctcacatgggctccccgtcttggggcccgtcgaacgcc
ttcccgaggcccagcctgccggtaccgggactgttcagtggaccggtcacttatgggatg
tattatttgtcttag
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