Nothobranchius furzeri (turquoise killifish): 107390838
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Entry
107390838 CDS
T05163
Name
(RefSeq) sodium channel protein type 8 subunit alpha-like isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107390838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107390838
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107390838
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
HpsJ
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
107390838
NCBI-ProteinID:
XP_015823281
LinkDB
All DBs
Position
sgr15:19051649..19099435
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AA seq
1966 aa
AA seq
DB search
MAAPLLAPPGPDSFKKFTRESLVVLEQRITEEKNKKPPKQDSSYRDDDDENKPKPNSDLE
AGKSLPYIYGDPPKGMVAVPLDDLDPYYLKTQKTFIVLNKGKTIFRFSATPALYFISPFN
PVRRIAIKILIHSLFSMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKITA
RGFCIDNFTFLRDPWNWLDFMVISMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKT
IVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVVWPINLNETYLNNGSKG
FDWNEYINNETNFYFLPGQLDALLCGNSSDSGNCPEGYTCMKAGRNPNYNYTSFDSFGWA
FLALFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQ
ATMEEAAQKEEEFKAMLEQLKKQQEEQTAPPATSAGTVSEDAVEDDGGGRLSVSSSEMSK
LSSKSAKERRNRKKKWRQKEQEKEKGDSEKFVKSESDDGSKRSRFRFPDNRLGRKSSIMN
QSLLSIPGSPFLSRHNSKSSIFSFKGRSKDMGSETEFADDEHSTVEECEERRGSLFSPYR
RNSYTGFHGKRNSTVDCNGVVSLIGPGPGGRLLPEVKIDKAASDDSPTTEVEVKKKLSGS
LMVSVDQLNTSFGRKERANSVMSAITNTLAEELEESQRKCPPCWYKFSNTFLIWECSPVW
IKIKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTSDFEDMLSVGNLVFTGIFAGE
MLFKLVAMDPYYYFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWP
TLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAADCELPRWHM
NDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSS
FSADNLAATDDDGEPNNLQISVMRIKKGIAWFKAKMRILVASLLRKPPMEDEQKPLDDMY
DKKVNYIGNHTGVDINRDLDYAKNGNGTTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVPI
AVGESDFENLNTEDFSSESDIENSKELDDTSSSEGSTIDIKPDVEEVVVVETVEEYMEPE
PCWTDACVAKYKCCDVDITLGWGKSWWFLRKTCYLIVEHNWFETLIIFMILLSSGALAFE
DVYIEKKKTIRIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVS
LVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFW
LIFSIMGVNLFAGKYYYCYNETSEEYFPVDVVNNRTQCFALINDNNTEVRWKNVKINFDN
VGAGYLALLQVATFKGWMDIMYAAVDSRGVEDQPDYEVNIYMYIYFVVFIIFGSFFTLNL
FIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKVQGLVFDF
VTQQVFDISIMILICLNMVTMMVETDDQSEQTENVLYWVNFIFIVVFTTEFLLKLFALRH
YYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIR
TLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHAAGIDDLYNFETFGNSMIIL
FMITTSAGWDGLLLPILNYPPDCDPLLENPGTSVKGDCGNPSVGIFFFVMYIIISFLIVV
NMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPTASQFISFAKLPDFADALEHP
LRVPKPNTIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRTQMEERFVAANP
SKVSYEPITTTLRRKQEDVSARTIQNAYRAHLIRRGIIFKRHILSSNKLENGGTNQDKKD
STPSTASLPSYDSVTKPDKEKQDKNKEEWSKKEKDKNQKDEWESKC
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttcttgcaccgccaggacctgatagcttcaagaagtttacgagggaa
tctttggtggtccttgagcagcgcatcacagaggagaagaacaagaagccacccaagcag
gacagcagctaccgagatgatgatgacgagaacaagcccaaacccaacagtgacctggag
gccgggaagagcctgccctacatctatggggacccgcctaaaggaatggtggcggtaccc
ctggatgatctggatccgtactacctgaagactcagaaaacctttatagtgctgaataaa
gggaagacaatcttccgttttagtgccacacctgccttgtacttcataagtcctttcaat
ccggttaggcgaatagctattaaaattttgatacattctcttttcagcatgatcattatg
tgtactattttgaccaactgtatattcatgacgtttagtgatcctcccgagtggtcaaaa
caagtagagtacacgttcacaggaatttatacatttgagtctcttgtaaaaatcaccgct
cgtggattctgtatagacaactttacattcctaagagatccatggaactggctggatttc
atggtgatttcgatggcgtatataacagagtttgtaaacctaggcaatgtctcagctctg
cgcacgttcagggtgttgagggcattgaaaacaatttctgtaattccaggcctgaagacc
atcgttggcgccctgatccagtctgtgaagaagctctcggatgtgatgatcctgaccgtc
ttctgcttgagcgtctttgccctgattggtctccagctcttcatgggcaacctgcgccaa
aagtgtgtggtgtggccaatcaacctcaacgaaacgtacctgaacaacggcagcaagggc
tttgactggaatgagtacatcaacaacgaaaccaatttctacttcctgcctggccaactg
gatgctcttctctgtgggaacagttcagactctggcaactgcccagagggctacacatgc
atgaaagctgggaggaatccaaactacaactacaccagctttgacagttttggctgggcc
ttcctggcactcttccgactcatgacacaggatttctgggaaaacctttacatgctgacg
ctgagagcagcagggaagacctacatgatcttctttgtcttggtgatctttgtgggctcg
ttctacttggtgaatctgattctggctgtggtcgccatggcgtatgaagagcagaaccaa
gccaccatggaagaggctgctcaaaaggaggaagagttcaaggctatgctggagcagctg
aagaagcagcaagaagagcagactgccccccctgcaacctctgctggcactgtgtcagaa
gatgcagtagaggatgatggaggagggcgtctgtctgtcagctcctctgagatgtcaaag
ctcagctcaaagagtgccaaagagcgccgcaaccgtaaaaagaagtggcgccagaaggag
caggagaaggagaagggcgacagcgagaagtttgtcaagtcagagtcggatgacggcagc
aagaggagccgcttccgtttccctgacaaccgcctgggtcgaaagtcttccattatgaac
cagtcccttctcagcattcctggttcgcccttcctctcccgccacaacagcaaaagcagc
atctttagtttcaagggccgcagtaaggacatgggctccgagacggaatttgctgatgac
gagcacagtacggtggaggagtgcgaggagcggcgcggctccctcttcagcccctaccgg
cggaacagctacaccggcttccacggcaagaggaacagcaccgtggattgcaatggagtg
gtgtcactcatcggccccgggcccggtggacgccttctgcctgaggtgaaaatagataag
gcagcttctgacgacagtccaactactgaggttgaggtgaagaagaagctgtcgggctcc
ctgatggtgtctgtggaccagctcaatacctcctttgggcggaaagagcgggccaacagt
gtcatgagcgccattaccaacacactagcggaggaactggaggagtctcagcgcaagtgt
ccaccgtgctggtataagttttctaacacattcctgatttgggaatgctcccctgtatgg
attaagatcaaggagattgtaaacctgatagtcatggatcccttcgtggacttggccatc
actatctgtatcgtcctcaacacccttttcatggccatggagcactatcctatgacgtct
gactttgaggacatgctatctgtaggaaatctggtgttcacagggatctttgcaggagag
atgcttttcaagcttgtggctatggatccatactactacttccaggaggcctggaactgc
ttcgatggattcatcgtgactctgagtttagtggagctggctctggctgacgttgaaggc
ctctctgtgctgcggtccttccgattgctgagggtgtttaagctagccaagtcctggccc
actctcaacatgctgatcaagatcattggtaactctgtaggagccttgggaaacttgact
ctggtgctggccatcatcgttttcatcttcgccgtggtgggcatgcagctgtttggaaag
agctacaaggactgtgtgtgtaagatcgctgccgactgtgagcttccccgctggcacatg
aacgacttcttccattcgtttctcatcgtcttccgggtgctgtgtggtgagtggattgag
accatgtgggactgcatggaggtggcaggccaggcaatgtgcctcatcgttttcatgatg
gtcatggtcattggtaacttggtggtgttgaacttgttccttgccttgctgctgagctca
ttcagcgccgacaacttggctgcaacagatgacgacggtgaacccaacaatctgcagatt
tctgtcatgcgcatcaagaaaggcattgcatggtttaaagcaaaaatgcgaattctggtg
gcgagtctactgaggaaaccaccaatggaggatgagcaaaagcctctggatgacatgtac
gacaagaaggtgaactacatcggtaatcacacgggggtggacatcaaccgtgacctggat
tacgccaagaacggtaatggcaccaccagtggaatcggcagcagtgtgggcaagtatatg
atcgacgaggaccacatgtcgttcatccacaaccccaatctgacggtgtgcgtgcctata
gccgtgggagagtctgactttgagaacctcaacacagaggacttcagcagtgagtcagac
attgaaaacagcaaagagctggacgacaccagctcttcggagggtagcaccatcgacatc
aaaccagacgtagaggaggtggtggtggtggagacggtggaggaatacatggagccagag
ccatgttggacagatgcctgtgtggccaagtataaatgctgtgatgtggatatcacgctg
ggctgggggaagagctggtggttcctcaggaaaacctgctacctgatagtggaacacaac
tggtttgagaccctcatcatcttcatgatcctcctcagtagtggtgccttggcttttgag
gacgtgtacattgagaagaagaagaccattcggatcattttggagtacgccgacagggtt
ttcacctacatcttcatcctggagatgttgctaaagtgggttgcctatggctttgtcaag
tatttcaccaatgcttggtgttggctggacttcttcattgtggatgtgtctatagtcagc
cttgtagctaatgcgctgggctactccgatctagggcccattaaatcactcaggacacta
agggccttgagacccctcagagccttgtcacgttttgaagggatgagggtggtagtcaac
gccctggtgggtgccatcccttccattatgaatgtgttgctggtttgcctcatcttttgg
ctgatttttagtatcatgggggtcaacttgtttgcggggaagtactactactgttacaac
gagacgtcagaggagtactttcctgtggacgtggtcaacaacaggactcagtgttttgcg
cttattaacgacaacaacactgaggtcaggtggaagaacgtcaagatcaactttgacaat
gtgggcgccggctaccttgctttgttgcaagtggccacattcaaaggatggatggacatt
atgtacgctgctgtggattccagaggggtggaagaccagcctgattatgaggtcaacatc
tatatgtacatctactttgttgtctttatcatatttgggtccttcttcaccctcaacctc
ttcattggtgtgatcattgacaacttcaaccagcagaagaaaaagtttggaggtcaggac
atcttcatgacagaggaacagaaaaaatactacaatgcaatgaagaaactagggtccaaa
aagccccaaaaacccattccgcgaccacaaaacaaggtccagggcttggtgtttgatttt
gtgacacagcaagtctttgacatctccatcatgatactaatttgcctcaacatggtcacc
atgatggtggaaacagatgatcagtcagaacaaacagaaaatgttctctactgggtcaac
ttcatctttattgtagtcttcaccacagagttcctgctgaagctctttgctctgcgccac
tattacttcacaaatggttggaacatctttgatgtggtggtcgtcatcctgtcaattgtt
ggcatgtttctggctgacctcattgagaagtactttgtgtcaccaaccttgttcagggtg
atcaggttggctcgtatcggccgtatccttcgtctcatcaaaggagcgaaggggatccga
accttactctttgccctgatgatgtccttgccagctctgttcaatattggcctgcttctc
ttcttggtcatgttcattttctccatcttcggcatgtccaacttcggctacgtgaaacac
gcagcaggcattgatgacttgtataactttgaaacttttggaaacagcatgatcatcctg
tttatgatcaccacatcagctggctgggatggtttattactgccaatcctcaactacccg
ccggactgcgacccacttttggaaaatcctggtacatcagtgaagggtgactgtggcaac
ccctcagtaggaatcttcttttttgtcatgtacataatcatttctttcctgatcgtggtt
aacatgtacattgccatcatcctggagaacttcagtgtggccacagaggaaagcgctgat
ccgctcagcgaggatgactttgagaccttctatgagatctgggagaagtttgatccaact
gcctcgcagttcatcagttttgccaagctgcctgactttgctgacgctttggagcaccca
cttcgtgtgccaaagcccaacacgattgaactaattgccatggacatgcccatggtgagc
ggtgatcgcattcactgcttggacatcctgtttgcctttacaaaacgtgtgctcggtgac
agtggtgagttggacatgctgaggacgcagatggaggagcgttttgtggcggccaatccc
tccaaggtgtcatacgaacccatcaccaccaccctccgccgcaaacaggaggacgtctct
gccagaaccatccagaacgcctaccgtgctcacctcatcaggcgcggcatcattttcaag
cgccacattttgtccagtaataagcttgaaaacggtgggaccaaccaagacaagaaggac
agcacaccttccactgcctctctcccttcatacgacagcgtgaccaaacctgacaaagag
aagcaggacaaaaacaaagaggagtggtccaagaaagagaaggacaaaaaccagaaagat
gaatgggaatcaaagtgttag
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