Nothobranchius furzeri (turquoise killifish): 107390844
Help
Entry
107390844 CDS
T05163
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107390844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107390844
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107390844
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107390844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-RING_6
RING_XB3-XBAT31
zf-RING_11
zf-C3HC4_5
zf-rbx1
zf-RING_10
DZR_2
Endonuclease_7
zf-UBP_var
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
107390844
NCBI-ProteinID:
XP_015823297
UniProt:
A0A1A8V6Q0
LinkDB
All DBs
Position
sgr15:19221240..19223416
Genome browser
AA seq
198 aa
AA seq
DB search
MATNLSSTCHAESPEDCAICLDTIQERKTLKCLHSFCSGCIDSVFSRKPACPVCNTFHGV
YTGTQPRGSMTVTRSWLSLPGFEHCGSIVIQYIFPAGIQGPEHPNPGVSYSSTSRTAFLP
DCAEGEKVLRLLRTAFDRRLTFTIGRSATTGLNNVITWNDIHHKTSIGGGPQHFGYPDPE
YLLRVQEELRLKGVTEDG
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacctgagcagcacctgtcatgcggagagtccagaagactgcgccatctgc
ttagacacaattcaggagaggaaaactctaaaatgtctccattccttttgctcagggtgc
attgactctgttttcagtcgcaagcctgcgtgtccggtatgcaacaccttccatggagtc
tacaccgggacgcagccccggggctcgatgacggtgacccgcagctggctgagtctgccg
ggcttcgagcactgcggctccattgtcattcagtacattttcccagcagggatacaaggg
cctgagcacccgaaccctggggtgagctacagcagcacgtctcgtaccgccttcctgcca
gactgcgctgagggagagaaagtcctgaggctactaaggacagcgtttgaccgaagactc
acatttaccatcggccgatcagccaccacaggcctcaacaacgtcatcacctggaacgac
attcaccacaagaccagcatcggaggcggcccacagcactttggatatccagatccagaa
tacttgctcagggttcaagaagagctgcgcctcaaaggcgtgacagaagatggctga
DBGET
integrated database retrieval system
