Nothobranchius furzeri (turquoise killifish): 107390863
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Entry
107390863 CDS
T05163
Symbol
l1cam
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107390863 (l1cam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nfu04515
]
107390863 (l1cam)
04090 CD molecules [BR:
nfu04090
]
107390863 (l1cam)
04091 Lectins [BR:
nfu04091
]
107390863 (l1cam)
Cell adhesion molecules [BR:
nfu04515
]
Immunoglobulin superfamily
L1 family
107390863 (l1cam)
CD molecules [BR:
nfu04090
]
Proteins
107390863 (l1cam)
Lectins [BR:
nfu04091
]
I-type lectins (Siglecs)
107390863 (l1cam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
Ig_DSCAM-DSCAML_C
V-set
Bravo_FIGEY
Pur_ac_phosph_N
C2-set_2
C2-set_3
Ig_4
Ig_5
V-set_CD47
Sp38
Orf78
Motif
Other DBs
NCBI-GeneID:
107390863
NCBI-ProteinID:
XP_015823334
LinkDB
All DBs
Position
sgr15:19573150..19612095
Genome browser
AA seq
1275 aa
AA seq
DB search
MPHTQRQQVCSWGQRSSLLLPLVLTLLSLSARPSRAALQIPADYHIDKKPPEITKQPVSV
TVFAVEDFSMSCGASGSPPPIFRWTKDGEEFDPGTDPELKVSESVDSFSFSTLSNSMDTL
KQYQGKYVCYASNELGTAMSKEAVLKTDVPPSQQKEKTITHRAEQGNSFVLQCDPPQSSM
EPIIHWMDMRLRHIQLDKRVVVGKDGSLYFAHLTLEDNRNDYTCNVQYLATRTIFAKEPI
TLIVNPSNSVVRNRRPAMMRPTGSSSVYHALRDDTIELECIVNGLPTPEIKWLKKNGELP
ESRAKREMFDRRLQLINITESDSGEYQCIAQNSQGKVTHTYMLTVEASPYWKRVPESQIY
APGENVRLDCEAKGTPTPVMSWTINGTPLSATDKEPRRSVTGNTSLILKDVIFGDTAIYQ
CQASNKHGTILTNTYVYVIELPPQILTEDRKLYQVTEGQSVQMDCETFGSPKPKVMWDRE
TSSLLADPRVNLLTSGELQIFDVTHDDKGFYTCSVQNHNLSISSELQVFNKTVIVTPPKD
LKVQPGNTAVFTCVEFHDIGLDDPIIQWRKNKKKLFESPSDEKYTFEGPEFMIANVEPED
EGVYTCEVITNLDKADASATLSLYDRPDPPSLLQISDPVQRAVTLSWTPGDNHNSLVQEY
VVEFEDQRFREKGWEELQRVKGNQEHALLSLWPYMSYRFRVIAINEVGKSNPSKPSEIHN
TPAEAPDNNPEDVRSESSDPNNLVIAWEKIDYRNFNGPEFKYKVQWRRVLGSGPKWHESN
TTAPPLIVNDVGDFSAFEIKVQAINEVGEGPEPDPVIGYSGEDVPLEAPMDVGIELINST
TIKVSWAAVDRETVRGHLMGYKIYVTRRGSRGHHRGRRSREFESTMIEETGPNDEKKVIS
NLRPYSHYELAITVFNKKGEGPRSEPMDFETQEGEPGPPTSLILDSPSETNMTLHWTPPA
HPNGILIGYLLQYQRITENDDSPMQVEKLDDPTVTHFTLTNLDRHSEYQFYVRGRTNAGD
GEPIKMRGATTLDGETPKDVSISVGENLVNVSWVAKKRHKNIGFYIHYKKNDGGKWKTSE
KVNYSQSFYQLQGLSPGSHYDLRFIHGNATFQKMTINTSGTEVTEVQQSIVTQGWFISVV
SVIVLLVLIMLIFCFIKRSKGGKYSVKDKEDGPMDSEARPMKDETFGEYRSLESDLEEKQ
TASQPSLCEDNKMCSEDTLNFNGSSVLTTEVNMDESLVSQISRPSVGPEGFHSLPDNSPL
NPAANGVPNSVNILN
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacacgcagcgacagcaggtttgcagttgggggcagcgctcctccctcctcctc
cccctggtcctcaccctcctctccctctcagcccggcccagccgagcagccttacagatc
cctgccgactaccacatagacaagaagcctccagagatcaccaaacagccggtgtctgtt
accgtcttcgccgtggaggacttctctatgagctgtggagcttctggcagccctccaccc
attttccgatggacgaaggacggagaggagtttgacccaggcacggacccggagctgaag
gtttcagagagcgtggactcattttcattctctacactcagtaatagcatggacaccctg
aagcagtaccaaggcaaatatgtctgctacgcgtccaatgagctggggacggccatgtct
aaggaggctgtactgaaaactgatgtccctccatcccagcagaaagaaaaaaccatcacc
catagggctgagcaggggaacagttttgttctgcagtgcgaccccccacagagctctatg
gagcccatcattcactggatggacatgcggcttcgtcacatccagctcgacaagcgggtg
gtggtgggaaaggacggcagcctgtactttgctcatttgacactagaagacaacaggaat
gactacacctgcaacgtccagtacctggccacacgtacaatctttgcaaaagagcccatc
actctgatagtcaacccctccaactcggtggtgcggaaccggagaccagccatgatgagg
cctactggaagcagcagcgtgtaccacgccctcagggatgacaccatagagcttgagtgc
atcgtcaacggccttccaactcctgaaattaagtggttgaagaagaacggtgagctgccg
gaatcgcgggccaaaagggaaatgtttgatcgccgcctgcagctcattaatatcacagaa
agtgatagtggggagtaccagtgcatagctcagaactcccaggggaaggtcacgcacacg
tacatgctgactgtggaagcttctccatattggaaaagggtaccagagagtcagatatac
gccccaggtgagaatgtcaggttagactgtgaagcaaaaggcacccccactcctgttatg
agctggaccatcaacgggacgcccctctcagcgactgataaggaaccaagacgttctgtg
acaggcaacacatcactgatccttaaggatgtcatctttggagacactgccatctaccag
tgccaggcctccaacaaacacggaactatcctcaccaacacctacgtctacgtcatcgag
ctgccccctcagatcctgactgaagacaggaaactgtaccaagtcaccgaaggccagagt
gttcagatggactgtgagacctttggctctcctaaacctaaagtcatgtgggacagagag
acatcgtccctcctggcagatcccagagttaacctgctcaccagtggagagctacagatc
tttgacgttacccacgacgataaaggtttctacacctgctcggtgcagaaccacaacttg
tccatcagctctgagctgcaggtgttcaacaagacagtgattgtgacaccacccaaggat
ctgaaggtgcagccagggaacacagcagtcttcacatgtgtggaatttcatgatatcggc
ctggacgatcccatcatccagtggaggaagaacaaaaagaagctgtttgaatcccccagc
gatgaaaaatacacattcgaagggccggagttcatgatagctaatgtggaaccagaagat
gagggcgtctacacctgtgaggtcatcactaatctggacaaggctgacgccagcgccacc
ctctctttatatgaccgaccagatcctccaagcctcctccagatctctgatccggtgcag
agagctgtcactctcagctggactcccggagacaaccacaacagccttgtccaagagtac
gtggtggaatttgaggaccagcgtttcagagagaagggatgggaggagctacagcgagta
aaaggaaatcaggaacatgccctcctctccctgtggccttacatgtcttaccgcttccgg
gtcatcgccatcaacgaagtgggcaagagcaaccccagcaagccatctgaaatccacaac
acacctgctgaagctcccgacaacaaccctgaagatgtcaggagtgagtcctcagacccg
aacaatctggtcatcgcctgggagaaaatagactaccgaaactttaatggacctgagttt
aagtacaaggtgcagtggaggcgagtgctgggcagcgggcctaagtggcacgagagcaac
acaacagcaccaccactgattgtcaacgatgttggcgatttttctgcctttgaaattaag
gttcaggctatcaacgaggtcggcgaagggcctgagccagatccagtcattggatactca
ggagaagatgttcctctcgaggctccgatggatgtgggcattgagctaataaacagcact
accatcaaagtgagctgggcagctgtggacagagagacggtcagaggccacctgatggga
tacaagatttatgtgaccaggagaggctccagaggtcaccaccgaggccggaggtccagg
gagtttgagagcaccatgatagaggagactgggcccaacgacgagaagaaagtcatcagt
aaccttagaccgtactcccactatgagctggctatcactgtgttcaacaaaaagggagag
ggtccccggtctgagccgatggacttcgaaactcaagagggagaacctggtcctcccaca
tccctgatcctggatagcccctcggagaccaacatgaccctgcactggacacctcctgct
catcccaatggaatccttattggatatttacttcagtaccagcggattacagagaacgac
gacagccccatgcaggtggagaagttagatgaccccacggtgacccactttaccctgacg
aacctggatcgtcacagcgaataccagttttatgtgagggggcgcactaacgccggggat
ggagagcccattaagatgaggggggccaccacactggatggagaaactccgaaggatgtc
agcatatcagtgggggaaaacttggtaaatgtcagctgggttgccaagaagagacacaag
aatattggtttctacatccactacaaaaagaatgatggaggtaaatggaagacatcggag
aaggtgaactactctcagtctttctaccagctgcagggtttgagtcctggctctcattat
gacctacgcttcatccacggcaacgccacattccaaaaaatgacaatcaacacatcagga
acagaagtgacagaggtgcagcagagcattgtgacacagggctggttcatcagtgtggtg
agcgtcattgtgctgttggtgctgatcatgctcatcttttgcttcattaagaggagtaaa
ggagggaaatactcagtgaaagataaagaagacggtccgatggactcagaagcacgaccg
atgaaggatgaaacctttggagagtacagatctcttgaaagcgatctggaggagaagcaa
acagccagccagccatcactgtgtgaggacaacaagatgtgcagcgaggacacgctgaac
tttaacggcagcagtgtcctgaccacggaggtcaacatggacgaatctctggtcagccag
atcagccgtcccagcgtgggtccagagggattccacagcctacccgataactccccgcta
aacccagccgccaacggcgtgcccaattcagtcaacatccttaactaa
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integrated database retrieval system
