Nothobranchius furzeri (turquoise killifish): 107390864
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Entry
107390864 CDS
T05163
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04110
Cell cycle
nfu04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107390864 (smc1a)
04114 Oocyte meiosis
107390864 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107390864 (smc1a)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
107390864 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
107390864 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
107390864
NCBI-ProteinID:
XP_015823337
UniProt:
A0A1A8AGG0
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Position
sgr15:19616890..19626223
Genome browser
AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYKEDTGEERKFTRVIIGASSEYRINSKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTTLFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNETEIEKLNK
ELGQRNKEIDKDRKKMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKADMDELDKEMRAVELAKQDFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEMAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTDELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREITDLRDRMNLVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLHSGTMDDISQGEGSSQND
ESSSQRTSSSVLAKEALIEIDYSNLSEDLKDALSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNNCFESVATNI
DEIYKSLSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVMTFDLSQYPDASSNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggctatttaaaactaatagagatagaaaattttaagtcgtacaagggaagacaaatc
attggaccgtttcataaatttactgcaatcatcggacctaatggatcaggaaaatccaac
cttatggatgccatcagcttcgtgttggcagaaaagactagtaacctgcgtgtaaagaca
ctgaaggatctgatccatggagcgcctgtggggaagccagctgccaacagagcctttgtc
agcatggtgtacaaggaagataccggagaggaacgcaaattcacaagggtcattataggg
gcttcttctgagtaccgcatcaacagtaaggtggtgggcctgcctgaatacagtgaggag
ttggaaaaacttggaattcttatcaaggccaggaattttctagtttttcagggagctgtg
gagtctatagcaatgaagaaccccaaggagcgcaccaccctctttgaggagatctcacgt
tctggagagttggcccaggagtatgaccggaggaagaaggagatggtgaaagcagaggaa
gacacacagttcaattaccatcgcaagaagaacattgctgcagagcgcaaagaggccaag
caagagaaagaagaggccgagcgataccaacgccttaaagacgaagtggccagggccagc
gtacaattacagctcttcaagttgtatcacaacgaaactgagatcgaaaagctgaataaa
gagcttggtcagcggaacaaagaaatagacaaagaccgtaaaaagatggaccacgtggag
gaggagctgaaggacaagaaaaaggagctgggcaggctgatgagagagcagcagactatt
gagaaagaaatcaaggagaaggactccgagttaaaccaaaagaggcctcaatacatcaag
gccaaagagaatacctcacacaagataaagaaacttgaggctgcacgaaaatctctgcaa
aatgctcaaaagatgtacaagaagcgcaaagcggacatggacgagctggataaggagatg
agggcagtggaattagccaagcaagatttcgaggagagaatggaggaggaggcgcagagc
caaggccaggatctgactctggaggaaaatcaggtgaagcagtaccatcgtctgaaggag
gaggccagcaaacgcgctgccactctggcgcaggagctggagaagttcaaccgggaccag
aaggccgaccaggaccgtcttgacttggaggaaaggaagaaagtggagacggaggctaag
atcaaacagaagatccgtgaaattgaggaaaatcagaagcgaattgagaaattagaggat
tatatcaccaccagcaggcagtcgctggacgagcagaagcgtatggaggaggagctgacg
gaggaggtggagatggccaagaggaggattgatgagatcaatatggagcttaaccaggta
atggagcagctgggcgacgccagaatcgaccggcaggagaacagtcgacagcagcgtaag
gctgagattatggagagtatcaaacggctctatcctggctctgtgtacggccgtctgatc
gacttgtgtcagcccacgcagaaaaagtatcagattgctgttaccaaagtgttgggcaag
aacatggacgccatcattgttgattcagagaaaactggcagagactgtatccagtacatc
aaggagcagagaggagagcccgagaccttccttcctctcgactacctcgaggtaaaacca
accgatgaaaaactgagagaactgcgaggagccaaactggtgattgatgtgatccgctac
gagcctcctcacatcaagaaagccctgcagtacgcttgtggcaacgctttggtttgtgag
aacgtggaggatgcccgaaggatcgcttttggagggccgtacaggcacaagaccgtcgcc
ctggatgggactttgttccagaagtctggagtcatctctggaggagccagcgacctgaaa
gccaaggccagacgctgggatgagaaggcagtggacaaactcaaggagaaaaaggaaaaa
cttacagatgagctcaaggagcaaatgaaggcaaagaggaaggaggcggagctgcgtcag
gtccagtctcaggctcacggtctgcagatgagactcaagtactctcagagtgatctggaa
cagaccaaaaccagacacctgtccctgaacatgcaggagaagtctaaactggagagtgaa
ctcgccaattttggtcctcgcatcaatgacatcaaacggatcatccagtcccgtgagcga
gaaatcacagacctccgggaccgcatgaacctggtggaggatgaggtgtttgtggagttc
tgtaaggagattggagtgaggaacatccgagagttcgaggaggagaaggtcaagaggcag
aatgagatcgcaaagaagcgtctcgagtttgagacccagaagacccgcctgggaatccag
gtggactatgagaagaaccagctgaaggaggatcaggagaaggtcatgatgtgggagcaa
acggttaagaaagatgaagctgaaatcgagcgactcaagaaggaggagcacaggcacatg
aaaatcatcgatgagaccatggcccagctgcaggacctgaagaaccagcacctgactaaa
aagtctgaagttaatgacaaaaaccatgaaatggaggagatccgcaaaaaactgggagga
gccaacaaagagctgacccagctccagaaggaggtgaccgccattgagaccaaactggaa
caaaagcgaagcgatcgccacaacctgctgcaggcctgcaagatgcaggacatcaggttg
ccacttcactccggaacaatggacgatatcagccagggagaggggagctctcagaacgac
gagtccagcagtcagaggacatccagcagcgtcctggctaaagaagctctgatagagatc
gactacagcaacctgtctgaggacctgaaggacgcgttgtccgaggaggagatcaaagcc
gagacaaacacactgcaacagcgtctgaatgagcagcagagcatcctacagaggatcagt
gcgcccaacatgaaagctatggagaagctggagagcgtcagggacaagttccaagaaacc
agcgatgagtttgaagcggctcgtaagagggccaagaaggccaagcaggcctttgagcag
atcaagaaggagaggtttgatcgttttaataactgtttcgagtctgtggccaccaacatc
gatgagatctacaagtcgctctcacgcaacagcagtgctcaggcttttctaggcccagaa
aacccagaagaaccctatttagacggcatcaactataactgtgtggctccaggaaagagg
ttccgaccgatggataacctgtcaggaggagaaaagaccgtcgccgccctggctctgctt
tttgctatccacagctacaaacccgctccgttctttgttctggatgagatcgatgctgcc
ctggacaacactaacattggaaaggtggcgaattacatcaaagaccagtcggtgcagaac
ttccaggccatcgttatttctctgaaggaggaattctacaccaaggcggactcgctcata
ggcgtttatccagagcaaggagattgtgtcatcagcaaagtgatgacctttgacctctcg
cagtatccagacgccagctcgaacccaaatgaatga
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