Nothobranchius furzeri (turquoise killifish): 107391001
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Entry
107391001 CDS
T05163
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04010
MAPK signaling pathway
nfu04260
Cardiac muscle contraction
nfu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107391001
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107391001
04261 Adrenergic signaling in cardiomyocytes
107391001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107391001
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107391001
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
107391001
NCBI-ProteinID:
XP_015823502
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Position
sgr15:22673058..22765911
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AA seq
1092 aa
AA seq
DB search
MQVDRRCAVCCAWFTWLLLLFSTLSVGASGVGGTHKSIPASVVKLWASAFGGEMKSISAK
YSGSQLLQKKYKEFEHTVRVEEIDGLRLVKRLAKNMEEMFHKKAQAMKRLVEAAEEAHLQ
HEEDPDLQYEYFNAVLINEVNEEGNNVELGGEFVLQPNDHFNNLSVNLSLSVVQVPTNMY
NKDSAIVNGVFWSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWKPDEHGVIAF
DCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSIRDTLGDDDFFNIIAYNE
ELHYVEPCLNGTLVQADVTNKDHVREHLDKLFAQGIGMLDIALTEAFSLLSDFNKTGRGS
ECSQAIMLVTDGAVHTYDAIFDKYNWPDKKVRIFPYLIGRESAFAENLKWMACANKGYFT
QISTLADVQENVMEYLHVLSRPKVIDREHDTVWTEAYIDSTLPQAQKLEDGQGPVLMTTV
AMPVFSTKNETRNHGILLGVVGTDVPVSELLKTIPKYKLGIHGYAFAITNNGYILTHPDL
RPLYGDGNKRRKPNYSSVDLSEVEWEDKDDTLRNAMVNRKTGTFSMEVTKSVDKGKRVLI
LHNDYYYTDIKGTPFSLGVGLSRGHGKYFFRGNVTVEEGLHDLEHPDVALADEWTYCNTD
EHPEHRYLSQIEAIKMYLSGHEPRLQCDKELIQEVLFDAVVTAPLEAYWTSLVLNKSENS
DKGVEIAFLGTRTGMSRINLFVLPDELTNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPG
TFIYSLPFNTGSENKSVVLASTAIQLLDERESPIAAAVGIQMKLEFFQRKFWTASRQCTA
LDGRCSISCDEENINCYLIDNNGFILVAEDYTLTGNFFGQAEGAVMSKLLQMGSFKRVTL
YDYQALCRVYSESRDSGHTLLDPYFAFLAAVKWTLTELVIFLVEFNLYSWWNSDFTAKAQ
TAGPSMQVPCDTEYPAFVSERTIKENMGNIDCDGCIKSFVIQQIPSSNLFMVVVDNTCDC
SNFEPITMEPIEIMYNESLKCERIKVQKDRRRPDTCHPFHSEENPMECGGATSLTSSLAA
KLFCAFLVLFLR
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtagatcggagatgcgcggtttgctgtgcttggtttacctggctgctcttactt
ttctcaactctgagcgtcggggcgagcggggtgggaggcacccacaagagcatccctgcg
tccgtggtgaagttgtgggcatcagcatttggtggtgagatgaagtccatttctgcaaag
tactctggctcccagctgctgcaaaagaaatacaaagagtttgagcatacagtgcgggtg
gaggagatcgatgggcttcggctggtgaagaggctggcaaagaacatggaggagatgttt
cacaagaaagcccaggccatgaagagactggtcgaggcagctgaggaagcccatctgcag
catgaagaggatccagacctgcagtacgaatacttcaatgctgttctgatcaatgaggta
aatgaggaggggaacaatgtagagctgggaggagagttcgtcctgcaacccaatgatcat
ttcaacaacctgtcagtcaacctgagtcttagtgtggtccaggtccccaccaacatgtac
aacaaagactctgctatagtcaacggcgtgttctggtccgaggccctgaacaaagtgttt
gtggataactttgagcgagacccctcgctcatatggcagtacttcggcagcgccaagggc
ttcttcagacaatacccaggaatcaaatggaagccagatgaacacggggttatagctttt
gactgtcgtaaccggaagtggtacatccaggcggccacttctccaaaggatgtggtgatc
ctggtggatgtcagcggcagcatgaaaggcctgaggctgacaatcgccaggcagactgtt
tcttccattcgggacacgctgggagatgatgactttttcaacataatagcttacaacgag
gaattacattatgtggaaccgtgtctgaatggaacgctggtccaagcggatgtaaccaac
aaagatcatgtccgggagcacctcgacaagctgtttgctcaaggcattggtatgttggac
atagctctgactgaggcgttcagtcttctcagtgatttcaacaagactgggagaggtagt
gagtgcagccaggccattatgttggtgacggatggagcggtccatacctatgatgccatc
ttcgacaaatataactggccagacaagaaggtccgaatattcccttacctgattggtcgg
gagtcagcctttgcagaaaatctcaaatggatggcgtgtgctaacaaagggtactttact
caaatttcaacattggcggatgttcaagagaatgtaatggaataccttcatgtgctgagt
cgtcccaaagtcattgatcgagagcacgacacagtgtggacagaggcttacattgatagc
actctcccccaagcacaaaagttggaggacggtcaagggccagttctgatgaccacagtt
gcgatgccagtgttcagtaccaagaatgagacgagaaatcatgggatccttctgggtgtg
gtgggaacagatgtgcctgtctcagagctgcttaaaactattcccaaatataagcttggc
attcatggctacgcttttgcaatcaccaacaatggctacatcctcacccacccagattta
cggccactttacggagatggcaataagcgaaggaagccgaactacagcagtgtggatttg
tccgaggtggaatgggaggataaggacgacacgttgagaaacgccatggtcaacaggaag
acaggaaccttctctatggaggtgacaaaaagcgtcgacaaagggaaacgtgtactcatt
ttacacaatgattactactacacagacattaaagggactcctttcagtctaggggttggt
ctttccagaggccatgggaaatatttcttcagagggaacgttactgtagaagaaggactt
catgacttggagcaccctgatgtagcactggcagatgagtggacatactgcaacacagat
gaacaccctgagcaccgctacctgtctcaaatagaagcaataaaaatgtacctcagtgga
catgaacctcgtttacaatgtgacaaggagctgattcaggaggttttgtttgacgctgtg
gtgactgctccactggaagcttactggaccagcctcgtgctcaacaaatcagagaactct
gataaaggtgtcgagattgccttcctgggtacaagaacaggaatgtccagaattaatctg
tttgtgttgccagatgaacttacaaaccaagacttcctaacagctgaagacaaagagggg
gtgttcaatgctgatcactttcccctttggtataaaagagcagcagaacaagttcctggt
acttttatctactctctaccattcaacacaggatcagaaaacaaaagtgttgtattggcc
agcactgccattcagcttctggatgagagggaatctcctatagcggcagctgtggggatc
cagatgaaactggagttttttcaaagaaagttctggacagccagccgacagtgcactgca
ttagatgggagatgctccataagctgtgatgaagagaatattaactgctacctcatcgac
aacaacggcttcattctggtagcagaggactacactttgacaggaaatttctttggtcaa
gcagaaggagctgtgatgagtaagcttcttcagatgggctctttcaaaagggtcacgctt
tatgactaccaggcgctgtgtcgggtctattcagagagcagggacagtgggcacactctg
ctggatccctactttgctttcttggctgcagtaaagtggaccctgacggagcttgtcata
ttcctggttgaatttaacttgtacagctggtggaactctgatttcactgcaaaagctcag
acagcaggaccgagcatgcaagtgccttgtgacaccgaatatccagccttcgtctcagag
agaaccatcaaggaaaacatgggcaatattgactgtgatggctgtatcaagtcctttgtg
attcagcagatccccagcagtaatcttttcatggtggtggtggacaacacatgtgactgc
agcaactttgagccaatcaccatggagcccatcgaaatcatgtataatgaatcgctcaag
tgtgagagaataaaggtacaaaaggacagaaggcgaccagacacctgtcacccctttcat
tcagaggaaaacccgatggagtgtggaggggctacaagtctcacatcatctcttgcagca
aaattgttctgtgcattcctggtattgttcctcaggtga
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