Nothobranchius furzeri (turquoise killifish): 107391018
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Entry
107391018 CDS
T05163
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03250
Viral life cycle - HIV-1
nfu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107391018 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
107391018 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107391018 (samhd1)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107391018 (samhd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
PDEase_I
SAM_TNK
Motif
Other DBs
NCBI-GeneID:
107391018
NCBI-ProteinID:
XP_015823533
UniProt:
A0A1A8ATI2
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Position
sgr15:24243830..24254444
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AA seq
617 aa
AA seq
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MASRKRPIDSTDEGFKTPERRRSAVLQPDSDFLLWGVEETCRYLRNEGLRRWEKTFRDQN
ITGVGLRYLKDEDLEKIGIKTLGDRLQVLHSLRKLWQIETNKVFNDPIHGHMDLHPLLIK
FIDTLQFQRLRYIKQLGGTYYVFPGASHNRFEHSIGVGYLAGQLVQALNERQPELLISRR
DILCVQIAGLCHDLGHGPFSHMFDGMFMPRARPQLNWKHETASVAMFDHLVEVNNLKPVM
EEHGLVMPEDLDFIKEQIAGPQRNPGQQWPYKGRPEDKSFLYEVVANKRNGIDVDKWDYF
ARDCHQLGIQNNFDYRRFLKFARVCVDKGQKQICTRDKEVGNLYDMFHTRNCLHRRAYQH
KVGNIIEVMVTEAFLKADPHIQIEGSNGKMFTISTAVEDMVAYTKLTDNIFEQILNSSNP
ELTEARKILRDILCRNLYKYLGQTQPNEPLIVTQETIHSWEADLARSVPQSSSHDPNLQP
EDFIVSVIVMDYGMKEKNPINNMRFYCKSDPTKAIQIYKNQVSKLLPEQFVEQQIRVYCK
KTDKESLEAAKKYFVQWCMDRNFTKPQDGDVIAPELTPLKASWRNNNDGESSDDSCSKEL
KAAQVNGVKKAKTQLFK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcggaagcgaccgattgattcgaccgacgagggcttcaaaacgccggagagg
agaaggtctgcggtcctgcagccggactcagacttccttctttggggagtggaagaaaca
tgtcggtacctgcgaaacgaaggtctgagacgatgggagaaaacattcagagaccaaaac
atcacaggtgttggcctgaggtacctaaaggatgaagacctggagaagattggcataaag
accttgggtgaccgcctgcaggtcttgcacagcctcaggaagctgtggcagatagaaact
aacaaggtgttcaatgatcccatccacggtcacatggacttacatccactcctcattaaa
ttcatcgacacccttcagtttcagaggcttcgatacatcaagcagcttggtgggacgtac
tacgtgtttcccggagcgtcccacaaccgctttgaacacagtattggggtcgggtacttg
gctggacaacttgtccaagctctgaacgagaggcagcctgaactcctcatctctcgtcgg
gacatcctgtgtgtgcagatcgctggactctgccacgatctgggacatggacccttttct
cacatgtttgatggcatgttcatgcctagagctcgtccacaactgaactggaagcatgag
actgcctctgtggccatgttcgaccacctggtggaggtcaacaacctgaagccagtgatg
gaggagcatggcctggtgatgccagaggacctggactttatcaaggagcagatcgctgga
ccacagagaaatccaggacagcagtggccgtacaaaggacgtcctgaagacaagtccttc
ctgtatgaggttgttgccaacaaaaggaacggcatcgatgtggacaagtgggactatttt
gccagggactgccaccagctgggtatccagaacaactttgactatcggcgcttccttaaa
tttgccagggtgtgtgtggacaagggacagaagcagatctgcactagagataaggaagtg
ggaaatctgtatgacatgtttcacaccagaaactgtctgcacagaagagcctaccagcac
aaagtgggcaacatcatagaggtcatggtcacggaggcctttttaaaagcagatccacac
attcagattgaaggttcgaatgggaagatgtttaccatctccacagctgtagaagacatg
gtggcctacaccaagctgactgataatatatttgaacagatattgaactcttccaatccg
gagctcacggaggcgaggaagatcctgcgagatatcttgtgcaggaacctctacaagtat
ctgggccaaactcagccaaacgagcccttaatcgtcacccaggagacgattcacagctgg
gaggcagatttggctcgatccgtccctcagagcagtagccacgatcctaatctacaacca
gaggactttattgtcagtgtaatagttatggactatgggatgaaggagaagaaccccatc
aacaacatgcgcttctattgcaaatctgacccaacaaaagccattcagatttacaaaaac
caggtgtctaagctgcttccagagcagtttgttgagcaacagatcagagtctactgcaag
aagacggataaagagagtctggaggctgccaagaagtactttgttcaatggtgcatggac
aggaacttcaccaagcctcaggatggagatgtgatcgcacctgagctgacccctctgaaa
gccagctggcgcaacaacaacgacggagagagcagcgacgactcctgctccaaagaacta
aaagctgctcaggttaacggggtcaagaaagccaaaactcagctgtttaagtga
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