Nothobranchius furzeri (turquoise killifish): 107391031
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Entry
107391031 CDS
T05163
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107391031 (dhx35)
Enzymes [BR:
nfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107391031 (dhx35)
Spliceosome [BR:
nfu03041
]
Complex C
Other components
Complex C specific factors
107391031 (dhx35)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
Cas3-like_C_2
AAA_19
nSTAND3
AAA_7
AAA_30
AAA_23
ATPase
Motif
Other DBs
NCBI-GeneID:
107391031
NCBI-ProteinID:
XP_015823552
UniProt:
A0A1A7ZK70
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All DBs
Position
sgr15:24440884..24447183
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AA seq
699 aa
AA seq
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MAAPRATMKFWKPGTEAPGISEERELTSETTVSPIIFNPNTALSIEKQRQKLPVFKHRNN
ILYLVESHQTVIIVGETGCGKTTQIPQYLLEAGWATEGKVIGVTQPRRVAAISVANRVAE
ERGALLGHEVGYTIRFDDCSDPHATRVKFLTDGMLVREMMADPLLKKYSVLMLDEAHERT
LYTDIAIGLLKKIQKKRRDLRVIVASATLDAKNFHEFFNLNDSGDPNKDTSAILTVEGRT
FPVDVFYTVSPVPDYVKATVETVMKIHESEEDGDILAFLTGQEEVEKVVSLLQEQARALS
RYGLKKHLRILPMYSGLPYADQMKVFERAPSNVRKIVVATNIAETSITISGIVFVIDCAF
VKLRAYNPCTAIESLVVTPISKASASQRAGRAGRNRPGKCFRLYTEEDFEKLPASTVPEM
QRSNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYALGGLDQYGRLTDPMGVR
MAEFPLTPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVVPPNQKKVAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLLRAMTVREQLRRLMNKFKVPRTSSEGD
PDVILRCIVSGFFANAARIHHSGSYRTLRDDLELHIHPNSVLYGEKPPKWVVFNEVVQTS
KYYMRDVTAVESSWLVELAPHFYKQAKHGSLASKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccccgcgccacgatgaaattttggaagccgggaacggaggcaccggggatc
tcagaggaacgggagctcacctcagagaccaccgtgtctcccatcatcttcaaccccaac
accgccctctccatagagaaacagaggcagaaactccctgtttttaagcacagaaacaac
attctatacttggttgaaagccaccagactgtaatcatagttggtgagactggatgtggg
aagacgacacaaatacctcagtacctgctggaggctggctgggccacagaagggaaagtg
attggagtgacgcagcctcgacgtgtggctgcaatctctgtggctaaccgtgttgcagag
gagcgaggggccctgctgggacacgaggttggctacaccatccggttcgatgactgctct
gatccccatgccacaagggttaagtttctaacagatggcatgctagtgagagagatgatg
gctgatcctcttttgaaaaagtacagtgtgttgatgctggatgaagcacatgagagaact
ctctacacagacatagctattggtctgctgaagaagattcagaagaaacgaagagaccta
cgggtgattgtggcctctgccaccctggatgccaagaacttccatgaattctttaacctg
aatgactccggggatccaaacaaggacacaagtgccattctaacagtagagggacgcact
tttccagtagatgtcttctacacggtcagtcccgtcccagattacgtgaaggccacggta
gagaccgtgatgaagatccacgagtcggaggaggatggggatatcctggctttcctcact
ggacaggaggaggtggagaaggtggtgtctctgctgcaggagcaggccagggctttatct
cggtacggtctgaagaaacacctgaggattttgcccatgtactctggacttccctatgcc
gatcagatgaaggtctttgagagagcaccttctaatgtccgcaagattgtggtggccact
aacatcgctgaaacctccatcacaataagtggaatagtattcgtcatcgactgtgcattt
gtgaagctgcgtgcgtacaatccttgcacggccatcgaatctctggtggtcacgcccatc
tccaaggcttcagccagccagagggcaggccgagccggacggaaccgccctggcaagtgc
ttcaggctctacacggaggaggactttgagaaactgccggcctctactgttccagaaatg
cagcgctccaatttggcccctgtcatcctgcaactcaaagctttaggcatcgacaacgtg
ctgcggttcagcttcctctcgcctcctccagctcagactatggtacaagctctggaactt
ctgtacgctcttggaggtctggaccagtacggccgtctgactgaccccatgggtgtacgg
atggccgagttccctctcacccccatgtttgcaaagatgcttcttgagtctggaaacttt
ggctgctccaaagagatcgttaccatagcagcaatgatgcagatccagaatatatttgtt
gtgccacccaatcagaagaaagttgctgctcgcgagcacaggaagtttgcagttgcagag
ggagaccacctcaccatgctgaacgtgtacgaagcatttattaagcaccagaagagctcc
cagtggtgtcaggaacattttcttaactacaagggtctgctgcgtgccatgacggtgcga
gagcagcttagacggctcatgaacaagttcaaagtgccccggacttccagcgagggtgac
ccagatgtgatcctgaggtgcattgtctctggattttttgctaacgctgcccgtatccac
cattctggttcctaccggacgttacgagacgatcttgagctccacatccacccaaactct
gtgctttacggagagaaacctccaaagtgggttgtcttcaacgaggtggtgcaaacatca
aaatactacatgcgcgatgtgaccgctgttgagtcgtcctggcttgttgagttagctcca
cacttttacaagcaagcaaagcatggttcactggccagcaagagatcccgagttctctga
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