Nothobranchius furzeri (turquoise killifish): 107391078
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Entry
107391078 CDS
T05163
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107391078
Spliceosome [BR:
nfu03041
]
Common components
Common spliceosomal components
General mRNP proteins
107391078
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
107391078
NCBI-ProteinID:
XP_015823616
UniProt:
A0A9D3BJS1
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All DBs
Position
sgr15:complement(27026121..27033727)
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AA seq
496 aa
AA seq
DB search
MADDFDVEAMLEAPYRKDENKSSHANGHEEHNKKKRRSRSRSPGSRKKRSRSRSKDKRKS
KKRSKSRERKRSRSRERHRSRSRSKERSGRYKGRKSPIRKRSKSRTPVKKEKSPVRQPID
NLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFVE
SSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSAGPMRLYVGSLHFNITE
EMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKV
GHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQMTG
SIPFGGIAAPAVPSPAPSQALNLPSQPLATHCLQLSNLFNPQAEQDPNWANEIQDDVIDE
CNKHGGVVHIYVDKNSQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTYHNL
FPDSVTAKQLLMPSRR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgactttgacgttgaggccatgctagaggctccatacagaaaggatgagaac
aaatcctctcatgcaaacggacacgaagaacataacaagaaaaagaggaggagcagaagc
cgaagtcctggctcgaggaagaagagaagcaggagcagaagcaaagataaaaggaagagt
aagaagagaagcaagagccgagaaagaaaacgcagccgcagcagagaacgccatcgcagc
cgctcacgaagcaaggagcggtccgggcggtacaaaggccgcaagagccccatccggaaa
cgttccaaaagtcgcactcctgtcaaaaaagagaagagtcccgttaggcaaccgatcgat
aatctgacaccagaagagcgagatgctcgcaccgttttctgtatgcaacttgctgcaaga
atcagagccagagatctggaggatttcttttcagccgttggaaaggtcagagatgtgcgc
ataatttctgacagaaactctcgcaggtcaaagggcattgcctatattgagtttgtggag
tcgtcttctgtaccgctggcaattggactgacgggtcaaaggctcttaggagtgccaatc
attgttcaagcctctcaggcagagaaaaaccgagcagcagctgcagcaaataatctgcag
aagggcagcgcaggtccgatgaggttgtatgtgggctcactgcacttcaacatcaccgaa
gaaatgctgcgagggatctttgagccatttggaaagattgaaggaatccagctcatgatg
gacagtgagactgggagatctaaaggatatggcttcatatcttttgcagatgcagaatgt
gctaagaaagccctggagcagctaaatggctttgagctggctggaaggcccatgaaggtg
ggacacgtcacagagcgctcagactcctcaaccgccagctcattcctcgataacgatgaa
ctggagcggactggcatcgacttgggaactacagggcgcctgcagcttatggcacgacta
gcagaaggtactggcttgaagattcctccagctgctcagcaggctctacagatgactggg
tccattccctttgggggtatagctgctccagcagttccatctccagctccaagccaagct
ttgaaccttccatcacagcctctggccacacactgccttcaactgtccaacctgttcaac
ccacaagcagaacaagatccaaactgggccaatgaaatccaggatgatgtgatcgatgag
tgcaacaagcatggaggagttgttcatatctatgttgataaaaactctcaaggtaatgtg
tacgtgaagtgcccctcaatcccagcagcgatggcaacggtaaatgcacttcatggacgc
tggtttgcaggtaaaatgattacggctgcttatgttcctttaccaacctaccacaacctt
tttcctgattcagtaacagcaaagcagcttctaatgccttcacgtcgatag
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