Nothobranchius furzeri (turquoise killifish): 107391176
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Entry
107391176 CDS
T05163
Symbol
taf4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107391176 (taf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfu03021
]
107391176 (taf4)
03036 Chromosome and associated proteins [BR:
nfu03036
]
107391176 (taf4)
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107391176 (taf4)
Coactivators
SAGA/TFTC/STAGA complex
107391176 (taf4)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
107391176 (taf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
107391176
NCBI-ProteinID:
XP_015823802
UniProt:
A0A1A8V0U7
LinkDB
All DBs
Position
sgr15:29833219..29846725
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AA seq
833 aa
AA seq
DB search
MDETVGITSAESSVTAAQSQSKLTTASGVVKVVSDATQGTVKPHRTGAETLNGGNVVMNC
HVPGGGQPDSPAPASVTLVNGPASGGKEGAAVVSASPSPIIRTVISAQNAVTSCQPSVKT
VPTVTLVRPHLQTANDSPSADNTTTPNATVNKTDSSKTLPQTNSQVLASTGATIRSPTVL
QNLRISVPSTAAPPGGVRAIVPQVFAPRPTQPQQNATNVQNITFPPGMVLVCRETGRVMM
IHQQPLAQIQAQAQSQSAMTPRPTAPTSTPPVQVTSLQTPGTPLMGRSVTPTTIIKQSPP
VQTTLTATTTLQRPPVLQNTIMLGGGATSTGASTNVQSAGTQRVGATPTAVTAETLENVK
KCKNFLSTLIKLASGKQSTETTANVKELIKNLLDAKIEAEDFTSRLYRELNSSPQPFLVP
FLKRSLPALRQMTPDSEAFLHQSLPPLPSAQSTATTSSALSAVVLRPPLSSVSTTTAATK
TTVISLPQTPNSKPGLIVSQQQGTMVRPQVTLAPSPMVTFRGQTPNHIIVGQVVKQLPAA
KQTVAPGIRGVHVLGHASLSEAQRNSLKEAAGGGTFKDDDDINDVASMAGVNLSEESANI
LATNSELVGIVTRSCKDETFLFPPSLSRVALQIGKRFGVSELGTDVISYISHATKQRLQN
LLEKASHVAQQKNRSFKEDGQYEQVGDVRAQLKFFEQLDQMEKQRKEEQEREILLKAAKY
RSRQEDPEQLRLKQKAKEMQQLELAQIRQREANLTALAAIGPRKKRKADSPVRGATAEGP
GSGPSQPGASAGPGSRQFMRHRITRVNLRDLLFCLENEKETSHSQLLYKGFLK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggatgagacagttggaatcacttcagctgaatcgagtgtgacagccgcccagagtcag
tccaagctgacgactgctagcggagtcgttaaggttgtatcagatgcaacacaaggaact
gtgaagcctcaccggactggtgctgaaactttaaatggaggcaacgtggtgatgaactgt
cacgttcccggaggcggacaacccgacagccctgcgcctgcttctgtcacgcttgtcaat
ggacctgcttccgggggcaaagagggtgcagcagttgtatctgcgtcgcccagtcctatt
atccgaactgttataagcgcacaaaacgcagtgacctcatgtcagccctctgtgaaaact
gtccccacagtcacgctcgtgagaccacatctgcaaactgctaatgactctcccagcgcg
gacaacacgactacaccaaacgctactgtcaacaagacggattcctctaaaactctaccg
caaactaacagtcaggtgctggcttctactggcgccaccatccggagtcccactgttctg
cagaacctgaggatctcagttccatccactgccgctcctcctggtggagtacgagccata
gttcctcaggtgtttgccccacggcccacgcagccgcaacaaaatgccaccaacgtccaa
aacatcacatttcctccagggatggtcttggtctgcagggagacagggcgggtgatgatg
attcaccagcagccgttggctcagatacaagctcaggcgcagtcacaaagcgccatgaca
cctcgacctacagcccccaccagcactccacctgtccaggtcacgtctctacagactcca
ggcacaccactgatgggccgttcagtcactcccaccaccataatcaaacaaagtccgccg
gtccagaccacactcactgccaccaccacactgcagaggcctcctgtactgcagaacacc
atcatgctgggaggaggtgccacctccacaggagcctccaccaacgtccagtctgcagga
acccagcgggtgggagctactccaaccgcagtgacagctgaaactctggagaacgtgaaa
aagtgtaaaaactttttatctacacttattaagctagccagtgggaagcaatcaacagag
actacagcaaatgtcaaggagctgatcaaaaacctgctggacgcaaaaatagaggctgag
gatttcaccagtaggctgtaccgggagctcaactcttcgcctcagccttttcttgtaccg
tttctcaagcggagcctcccagctctacgtcagatgactccagactcggaggcctttctc
catcaaagccttccgcccctgcccagcgcccagtctactgcaacaacctcctctgccctc
agcgccgtagtcctgcgaccccccctctcctccgttagcaccactactgctgctaccaaa
accaccgtcatcagcctgcctcagacacccaacagtaaacctggcctgattgtgtcccag
cagcaggggaccatggtgagacctcaggtgacactcgctccgtctcccatggtaacattc
agaggacaaactcccaatcatatcattgtgggtcaggtggtcaaacagctaccagcagca
aagcagacggtggctccagggatcagaggagttcacgttcttggtcacgcttcactttct
gaagctcagaggaacagtctgaaagaagcggcaggaggaggaactttcaaggatgatgat
gacatcaacgatgtggcttccatggcaggagtcaacttatcagaggagagcgccaatatc
ttagcaaccaactctgagcttgtcggcatagtgactcggtcctgtaaggacgagaccttt
ctcttccccccttcactctcccgagtagctctgcagattggtaagaggttcggcgttagc
gagttgggcacagatgtgatcagctacatctcccatgctacaaagcaacgactgcagaac
ctgctggaaaaggcgtcacatgtggctcagcagaagaacagaagttttaaggaggacggg
cagtatgagcaggtcggcgacgtgcgagctcaactcaagttctttgagcagttggatcag
atggagaaacaaaggaaggaggagcaggaaagagagattcttctaaaggcagctaagtac
aggtcacgacaagaagacccagagcagctcagactcaagcagaaggccaaagagatgcag
cagctggagctggctcagatcagacagagagaagccaacctgactgctctggcagctatc
ggcccaagaaagaaacggaaggcagactcgcctgtcaggggtgcaactgctgagggccca
gggtcaggcccctcccaacccggagcctcagctggaccgggctccaggcagtttatgcga
catcgcatcaccagagtaaacctccgggaccttctcttctgtctggagaatgaaaaagag
accagtcactcacagctgctgtataaaggcttcctcaaatag
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