Nothobranchius furzeri (turquoise killifish): 107391180
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Entry
107391180 CDS
T05163
Symbol
cdh4
Name
(RefSeq) cadherin-4
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107391180 (cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nfu04515
]
107391180 (cdh4)
Cell adhesion molecules [BR:
nfu04515
]
Cadherins
Major cadherins
107391180 (cdh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2254
DUF2304
DUF5527
Motif
Other DBs
NCBI-GeneID:
107391180
NCBI-ProteinID:
XP_015823809
UniProt:
A0A1A8AWY6
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All DBs
Position
sgr15:complement(29882065..30224695)
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AA seq
932 aa
AA seq
DB search
MRSDFAVVLTAVLHTFWGNNAEHASKGSCRPGFSQSFYSVLISRDVLQGQSIVKGTTVSS
QKVMFDDCMENEGVVFQSSDPIFSVRQDGFIFARGDVASLDEPVQFKLTASGPYTNVWET
VIQLAVTDPPSPEQNDNEVTEGEKNPSERKQKKVAVLAPPPVIMFSGSHKSITKGHRRQK
RDWVIPPINVAENSRGPFPQMLVSIRSDQDKDISVRYSITGVGADQPPNEVFSIDPVLGK
MFVTKPLDREHRSSYHLRAHAVDMNGNQVENPIDLHIFVIDMNDNRPEFKNQVYNGSVDE
GSRPGTYVMHLSAFDADDNTTANGMVRYRILPQTPHSSIPNMFTINSETGDIVTVAPGLD
REKVSQYTIIVQATDMEGNLSFGLSNTATAIITVTDINDNPPMLTSRTFSGEVPENQVDV
VVANLTVIDADQPHSPNWNAVYRIISGDPAGHFTIRTDPVTNDGMVTVVKPVDFEMNRAF
MLTVVASNQAHLASGILSSLQSTAGVTISIQDVNEPPYFPTNPKHIRFEEGVPAGTSLTT
FSASDPDRLQMQQIIRYSKLNDPADWLSINRTNGQIVTTAMLDRESVHVKNNIYEATFLA
TDNGSPAASGTGTLQIYLIDINDNPPALVPRESQICERMNKNVNGVNITAADADTDPNAG
PFVFELPNFPSSIRRNWTISRISGDFARLGLRYQVYLEPGMYEVPIIVSDSGNPPLSNRS
VIKVKVCPCDEHGDCTTLGAVAAAGLGTGAIISILICIIILLSMVLLFVVWIKRREKERQ
TKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIMSKPPGIRRVDERPI
IPESQYPIRPVVPHPGDIGDFIHEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLN
STSTGDQDYDYLNDWGPRFKKLADMYGGGDDD
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtgacttcgccgtggtcctgacagcagtccttcacacgttctgggggaataat
gccgagcatgcctccaaaggttcctgtcggcccggcttctcacaaagcttctactccgtg
ctgatttcaagggatgtactgcaaggccagagcatcgttaaaggtaccacagtatcatca
caaaaagtgatgtttgacgactgcatggagaacgaaggcgtggttttccagagcagcgac
cccatcttcagcgtgcggcaggatgggtttatcttcgcccggggagatgtagccagcctg
gatgaaccagttcagtttaaactgacagcaagtggcccatacacaaatgtctgggaaact
gtgattcagctggcggtgactgacccaccatcacctgagcaaaatgacaatgaggtcacg
gagggagagaagaaccccagcgagagaaaacaaaagaaggtggctgtcctagcgccacct
cctgtcatcatgttctcaggatcccacaaaagcatcaccaagggccatcgcaggcagaag
agggattgggtgatcccgccaatcaacgtggcagaaaattctcggggcccgttccctcag
atgctcgtcagcattcgttcagaccaagacaaggacatctccgtccgatacagcatcact
ggggttggagcggatcaaccacccaacgaggtgttcagcatcgaccccgtgcttggaaag
atgtttgtcaccaaacctctggatcgtgaacatagatcgtcctaccatctgcgagctcat
gctgtggacatgaatggcaaccaggtagagaatcccatcgatctgcacatctttgtcatt
gacatgaatgacaacaggcccgagttcaaaaaccaggtctacaacgggtctgtggatgaa
ggctccagaccaggaacttacgtgatgcatctgtcagcatttgatgcggatgacaacacc
acagctaatggaatggtccgctatcggatcctgccccagacaccacacagctctattccc
aacatgttcaccatcaacagtgagacgggggatattgtgacagtagcacctggacttgac
agagagaaagtgtctcagtataccatcattgtgcaagccacggacatggagggcaaccta
agctttggcctttccaacacagccactgctatcatcacagtcacggacatcaatgacaac
cctcccatgctgacctccagaactttttctggtgaggtcccagagaaccaagtggatgtt
gtggtggctaacctgacggttatagacgcggaccagcctcactcccctaactggaacgcc
gtctaccggatcatcagcggcgacccggccggtcacttcaccatccgaactgatccggtc
accaatgacggcatggtcactgtggtgaagccagtggactttgagatgaaccgtgccttc
atgctgacagtggtggcatctaaccaggctcacctagccagcggcatcctgtcctcactc
cagtccactgcaggagtcaccatttctatccaggacgtcaacgaacctccttactttccc
acgaaccccaaacacattcgcttcgaggagggtgtccctgctgggaccagcctgaccacg
ttctcggcttcagatcctgaccgacttcagatgcaacagataatcaggtattcaaagctg
aatgacccagcggactggttgtccatcaacagaaccaatggtcaaatagtgacaacagca
atgctcgatcgggagtctgttcatgtgaagaacaatatatacgaagcaacatttctggcc
acagacaatggctcccctgcagccagtggcacaggcacgctgcagatctatttgatagat
attaatgacaaccccccagcgctcgtacccagggagtctcaaatctgtgaaaggatgaac
aagaacgtcaatggtgtcaacatcactgcagctgatgctgacacagatcccaatgctgga
ccttttgtcttcgagctgcctaacttccccagcagcatccgacgcaactggaccatttca
cggatcagcggtgattttgcccgtctgggtcttcggtaccaggtgtatttagagccgggg
atgtacgaggtccctataattgtctcagactcgggcaacccaccgttgtccaacaggtcg
gtcatcaaggtgaaggtgtgtccatgtgacgaacacggagactgcacgacacttggtgcc
gttgcagctgctggtttgggaaccggcgccattatctctatcctcatctgcatcatcatc
ctgctcagcatggtgctgctgttcgtggtgtggatcaagcgcagagagaaggagaggcag
acgaagcagctgctcatcgaccctgaagacgatgtcagggacaacatccttaaatatgat
gaagagggaggtggtgaggaggaccaggactacgatctgagccagctccagcagccagac
tctttagaacacatcatgagcaaaccgcccggcatacgcagagtggatgagcgtcccatc
atcccagaatcacagtatcccatcagacctgttgtgccccaccctggagacatcggggac
ttcatccacgaggggctgcgagctgcagacaatgaccctacagctccaccatatgactcc
ctgctggtgtttgactacgagggcagcggctccaccgccggctccgtcagctccctgaac
tccaccagcacgggggaccaggactatgactacctcaatgactgggggccccgcttcaag
aagctggctgacatgtacggaggcggggatgatgattaa
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