Nothobranchius furzeri (turquoise killifish): 107391204
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Entry
107391204 CDS
T05163
Symbol
aaas
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107391204 (aaas)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107391204 (aaas)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107391204 (aaas)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_CDC20-Fz
eIF2A
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
PD40
Beta-prop_CAF1B_HIR1
DUF5349
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
107391204
NCBI-ProteinID:
XP_015823842
UniProt:
A0A1A8BAE6
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Position
sgr15:30991138..31000333
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AA seq
548 aa
AA seq
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MFSCYLVLDSSSAKSDLAYENRERGFTMVKMCSLALFPPLSYGQITLCESNNELLSGTSS
DEALKQDFIPPSLHFPRESLKLHSRPESSSKAAFLDHSETLWMRSAAAWRDGGLSGLLNE
ITTSHSEAPKWLSVTSGCILAVLRWVSSFHGSLFPHVTLSSEDMITEFSQVLNWPDCVVR
AFSWHPHTDKFAVALLDDSIKIYNPKSAITPTLKHRLQRNVAAVQWKPLCASALAVACQN
CLLVWHVDPCSLSTRPSSSCAQVLSHPGHSPVTSIAWSPSGSLLLSASPMDMSMMVWDVA
AESCVPLHRVGGGGVTFLSWSPDGSHVLSSTPSPLFRVWETRTWTCERWPCIKGRCQSGC
WSPDGSRLLFSVQGETVIYALTFTGTPGAPASGFRGPEAAVVVADLSETTFNTPDGDVTV
GGEVQSLAWDPRGERLAVLFKGDPQAANKPAIVAVFKTRANPVFELLPCGFVQGEPGAEP
RLMQFHPNFRHGALLTLCWSTGRITHVPFYFLSTSGSFVGLGGSPSLPRLQEKPADFSHQ
SLFTELIS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctgttatcttgttttagattcatcgtcagctaaatctgacctcgcctatgag
aacagagaacgaggtttcaccatggtgaagatgtgttcgctggcgttgttccccccgctt
tcctacggacagatcactctgtgcgagtccaacaacgagctgctttcagggactagcagc
gatgaggcgctcaaacaagacttcatccccccgagtctgcatttccccagagagtccctg
aagctccacagtcgccctgaaagcagcagcaaagccgccttcctggaccactcggagacg
ctgtggatgaggagcgcagcagcctggcgggatggagggctctctggtctgctcaatgag
attaccacctcacattcagaggcacccaagtggctgtcggtgacttccggttgtatcctg
gctgtgctccgatgggtctcatcctttcacggctccctttttcctcacgtcacactgagc
agcgaggacatgatcacagagttttctcaagtactcaactggcctgactgtgtggtgcga
gcgttttcctggcatcctcacactgataaatttgctgtcgccttgttggatgactccatc
aagatctacaaccctaaaagtgccataactcccacactgaagcaccgtctccagaggaat
gtcgcagcggtccagtggaagcctctgtgtgcatctgcgctcgccgtcgcctgccaaaac
tgcttactggtgtggcatgttgacccctgctcactgtcaaccaggccctcttccagctgc
gctcaagttttatcacatccgggtcactctccagtcacgtccatcgcctggtctccaagc
gggtccctccttctgtctgcctcgccgatggacatgtctatgatggtttgggatgttgct
gcagagagctgcgtgcccctccatcgtgttggaggaggtggcgtcacgtttctgtcctgg
tcaccagacggcagccacgtcctgtcgtccaccccctcgcccttgttcagggtttgggag
acccgcacttggacctgtgagcgttggccgtgtattaaaggacgctgccagtctggctgc
tggagtccagatgggagccgtcttctcttcagtgttcaaggagagacggtcatctacgct
ctgaccttcactggaacaccaggcgctcctgcgagtggcttcagggggccagaggcagcg
gttgttgttgctgacctatcagagaccacctttaacacacctgatggagacgtcactgtg
ggcggagaggtgcagtctttagcctgggatcccagaggagagcggctggccgtgctcttt
aaaggtgatccacaagctgcaaacaagcctgccatcgtcgccgtctttaaaaccagagcc
aacccggtttttgagctcttgccgtgtggttttgtccaaggagagccgggtgcagagcca
cgactgatgcagttccacccaaactttcgacatggagctctgcttactctgtgctggtcc
actggaagaatcacccacgtgcctttttacttcctgagtaccagcggctcctttgtcggc
ctcggcgggagtccgtcgcttcctcgccttcaggaaaaacctgccgacttctcccatcag
tcactttttacagagctcatctcctga
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