Nothobranchius furzeri (turquoise killifish): 107391234
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Entry
107391234 CDS
T05163
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107391234 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107391234 (mbd4)
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107391234 (mbd4)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
107391234 (mbd4)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107391234 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
107391234
NCBI-ProteinID:
XP_015823900
UniProt:
A0A1A7ZX82
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Position
sgr15:31782367..31785673
Genome browser
AA seq
458 aa
AA seq
DB search
MDVKSPKEEPCDPMPHGWIREVRQRRTGKTAGKLDVYITSPAGQKFRSRASLHAFLLKGG
GVNLDMNFFDFTTSRDELPSSSSLHSEEKQKRGEQKGAGGCKEKIDEYLNTPSRKSKRHS
SSYRSKAKDTVVKIVENDLLCNNFPEISTDIEKVCEDKRKESVQSCSHVAPSQLVDDAHW
SNQRTGLLRDKILRLAPARNQQNSFPLHENKLAELQPSALALNAEAESMNDGESAPDTDV
TPNHSEGDKSNSEVAGDADSHEEEETEVLLPDSITRSSTPRNKSKSLENKWRTSPYFSKK
PLREGLSPPRRKAFRKWTPPRSPFNLIQETLFHDPWKLLVATIFLNKTSGKMAIPVLWQF
YERYPSAEVAREADWKPMSDLMRPLGLYELRAKTIIRFSDEYLNKQWRYPIELHGIGKYG
NDSYRIFCVEEWRQVTPEDHMLNKYHAWLWENHEALGI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggatgttaaaagccccaaggaggaaccgtgtgacccaatgccccatgggtggattaga
gaagtgaggcagagaagaacaggcaagacagcaggaaaattggatgtttacataacaagt
cctgcagggcagaaattccgctcaagagcatccttgcatgcattcctgttaaaaggtgga
ggagtaaacctggacatgaacttttttgattttactacatccagagatgagttacctagc
tcatcatcacttcattctgaagaaaagcagaagagaggggagcaaaagggagcaggtggg
tgtaaggagaagattgatgaatatctgaacactccctcacgtaaatctaaaagacactct
tcctcctacagaagtaaagctaaggacactgtagtaaagattgtagagaatgacttgttg
tgcaataattttccagagatctctacagatatagaaaaggtttgcgaagataaacgtaaa
gagtctgtgcagagctgctcacatgttgcaccatcacagttagtggatgatgcacattgg
agcaatcagagaacagggctgctgagagacaagatactcagacttgctcctgccagaaat
caacaaaactccttccctcttcacgaaaacaaactggcagagctgcagccttcagcccta
gctctgaatgctgaagctgagagcatgaatgatggcgagagtgcaccagacacagatgtt
acaccgaatcacagcgaaggtgacaagtctaattctgaagtggcgggtgatgctgacagt
cacgaggaagaggagacggaggtgttgttacctgacagcatcaccaggagcagcacaccc
aggaataagtctaagagtttggagaacaagtggagaacaagcccttattttagcaagaaa
cctctccgagaaggactcagcccacccaggagaaaggcttttaggaaatggacaccccct
cgatctcccttcaacctcatacaggaaacccttttccatgacccttggaagctcctggtt
gccactatttttctgaataagaccagcggtaagatggccattccagtgctatggcagttc
tatgagcgctacccatcagcggaggtggccagggaggccgactggaagcccatgtctgac
ctcatgaggccacttgggctgtatgaactccgggccaaaacaatcatccgattctcagat
gaatatctgaacaaacagtggcgttatcctattgagctgcatggcatcggcaagtatggc
aacgactcctacaggatcttctgtgttgaagagtggagacaggtgacccctgaagatcac
atgttgaacaaatatcacgcctggctgtgggagaaccatgaagcactgggaatctga
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