Nothobranchius furzeri (turquoise killifish): 107391311
Help
Entry
107391311 CDS
T05163
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nfu01001
]
107391311 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107391311 (trim33)
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107391311 (trim33)
Protein kinases [BR:
nfu01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
107391311 (trim33)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107391311 (trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
107391311
NCBI-ProteinID:
XP_015824045
UniProt:
A0A8C6PD35
LinkDB
All DBs
Position
sgr15:34281260..34316451
Genome browser
AA seq
1198 aa
AA seq
DB search
MADNKGEEDMEPSAKSDSVSSVQHTELTEPNPENAVIILETGSKGDAETETDNANGEPPP
NSETVDISSGGTAVEVEEANGSISNTVSPAETSGSTNVEPTVADTLPASDAPAGGPSTET
PTPPSTAAATPVSTPINLLDTCAVCKQSLQTRDCEPKLLPCLHSFCLKCIPQPDRQISVQ
VPGPHGQTDTHIVNVMRCSVCYQDYKQSDIIDNYFVKDNTEAISTLDEKSAQVCTSCEDN
AGTIGFCVECGEWLCKTCVEAHQRVKITKDHKIRTKEDADAVSESVSTSGQRPVFCPVHK
QEPLKLFCETCDTLTCRDCQLLEHKEHRYQFLEEAFQNHKGIIEANMSKLQEKKKYVHYS
VSQVQSRLKELNETHRKVEHEIKIAVFTLINEINKKGKALLQQLESVSKERSMRLVAQHK
DTTQLAQQVNHVLGFCHWAITSGSSTALLYSKRPIMYQLRQLFKARLEQAPQSNGVVRFF
CDPTFWAKNVVNLGSLVIEKPPPPAQPPGVLVGPALSPGQVLPGKHPGQINLAQLRLQHM
QQAAYAKQQQQHQHQQQQQQQQQQQQQIQQQMRIASQLSQQHPRQAGPPIVQQQPPRLIS
MQQLQRGPGGMNGGPNPSMYPSSHHMRLPGPSQGRMPTAQPRLNGQQYSPMMQPQLQRQM
SIESEMSHPRFRFLLQSGHSNPGHAGPFPVASLHNASPTSPTSASMAGSHVHRGPTSPII
GPIELIPSVTNPEKLPCLPEIPPIQLEDAGSTSLGNLLSRYISASTHQLGSLDMNPSPGL
STLSPGLSGLSNAQTPARPSSNSSTGSRGSCSSAGRGGAGSGASAEQVKVKKEPGTEDSY
SCPSSSLKTERGADARRSACMMSSPENSPLGAASAGHDTLRVPGERIKTEPEPDTPCSGL
NGASTMTPSTSTTSTNTSATKNSYSQSELPLTNGNVDKSSSRASEAAGGSGGKEDDPNED
WCAVCINGGNLLCCDRCPKVFHMKCHVPTIKIFPKGDFLCTFCRSIANPEIEYCDESRRL
KEDQSLTAEDQRKCERVLLYVFCHELSVGFREPVPSSVPNYYKIIKQPMDLKRVKRKLQL
RSSQYYKSIQEFVQDMRLVFKNCSTYNEMSRIIQVYDEEKEINTQVGSEMAISGKAVSLY
FEEKLAAIFPDQNFPDTPEPESPDEKEKEDEDTDDSEEEFIQPRRKRLKMDDKIVHVK
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggcggataacaaaggcgaggaagatatggaaccgtcagctaaatctgactcggtgtct
tcagtgcaacatactgagctgacggaaccaaaccccgaaaatgcggtaatcattttagaa
acaggttcaaagggggacgcggaaaccgagacagacaatgctaacggcgagcccccgccc
aacagcgaaacagtagacattagcagcggcggaactgctgtagaagtagaggaagccaac
ggtagcattagcaacaccgttagccctgctgagaccagtggcagcaccaatgtggagccc
acggttgccgatacccttcccgcctccgatgctcctgctggcggaccctcaactgaaacc
cctaccccaccttccactgcggcggccacgccggtatccactcccattaatttactggat
acgtgcgcagtgtgtaaacaaagtctgcagactcgagactgtgaaccgaaacttctgcct
tgtctacactccttttgcctaaaatgtatcccgcaaccagaccgacaaataagcgtacag
gtgcctggaccacacggacaaacggacacacatatagtaaatgtgatgcggtgttcagtt
tgctaccaggactacaaacaaagtgacatcattgacaactacttcgtcaaagacaacaca
gaggcaatcagcactttggatgaaaaatccgcacaggtatgcacaagctgtgaagacaat
gctgggaccataggcttttgtgttgaatgtggagagtggttgtgtaagacatgtgtggag
gcccatcaaagagtcaaaattaccaaggaccacaagatccgtacaaaggaggatgctgat
gctgtctctgagtctgtcagtacatcgggacagagaccagtcttctgtcctgtccacaag
caggaacctctgaagcttttctgtgagacatgtgacacattgacatgtagggactgccag
cttttggagcacaaggagcacaggtaccagtttctggaagaagccttccagaatcataaa
ggaatcattgaggccaacatgtccaagctgcaggaaaaaaagaaatatgtccattactct
gtttctcaggtgcaaagcaggttaaaagagctgaatgagacccacaggaaggtggagcat
gagattaaaatagcagtattcaccctcataaatgaaatcaataaaaagggcaaggccttg
cttcagcagttggagagtgtgagtaaagaacgcagcatgaggcttgtggctcagcataag
gatacgacccaactggcccaacaggtcaaccatgtgctcggtttctgccactgggctatc
acctctggcagcagcacagcgttactctacagcaagcggccgatcatgtaccagcttcgc
cagctcttcaaggctcgactggaacaagcaccacagtctaatggagtggtacgattcttc
tgtgatccaaccttttgggccaaaaacgtggtcaatctcggtagtctagttattgaaaaa
ccacctccacctgcacaacctcccggtgtgttggtaggaccagccctctcaccaggccag
gtcctacctggcaaacacccaggacaaatcaacctggctcagctacggctgcagcacatg
cagcaggctgcttatgcaaagcagcagcaacagcatcagcatcagcagcagcagcagcag
cagcagcaacagcagcagcagatccagcaacaaatgcgaattgcctctcagttgtcccag
cagcatcccagacaggcaggccctcccatagttcaacagcagcctccaaggctcatcagt
atgcagcaactacaaaggggtccagggggtatgaacggagggcctaatccatccatgtac
ccctcgtcccatcacatgcgcctgcctggtccatctcagggtcggatgcccacagctcag
cccagacttaatggacagcagtactcgcccatgatgcagccacagctgcagagacagatg
tctatagaatctgagatgagccacccaaggtttcgtttcttactgcagtcagggcattcc
aatccaggacatgcaggccctttcccagtggcatccctgcataatgccagtcccacgagt
ccaaccagtgcaagtatggctggttcccatgttcaccgtgggccaaccagccccataatt
ggtcccattgaactcattccttctgtcactaatcctgagaaactgccatgcctacctgag
attcctccaattcagttggaggatgcaggttccaccagccttggaaatctcctttctcgt
tacatctcagccagcactcatcagctcggctctcttgacatgaacccctcacctggacta
tcaacactttctcctggattgtcaggactgtctaatgcccaaacaccagcacgaccttcg
agcaactcgagcacgggaagcagaggcagctgtagctctgcaggcagagggggagctgga
agtggagcctctgcagagcaggttaaagtgaagaaggaacctggtacagaggacagctac
agctgtccctcgtcttctctgaagactgaacggggagcggatgctagaaggagtgcctgt
atgatgagcagtccagagaacagccccctgggagctgcatctgcaggccacgacactctg
agggttcctggggaacgcattaagacagaacctgagccagacacgccttgttctggacta
aatggagccagtaccatgacaccatccacctctacaacctccaccaacacgtcagccacc
aagaacagttacagtcagtcagaactaccgctcacaaatggaaacgtagacaagagcagc
agcagagcatcagaagcagccgggggttctggtgggaaagaagacgatcccaacgaggac
tggtgtgctgtctgtatcaacggtggtaacctgctgtgctgtgaccgctgtcctaaagtg
ttccatatgaaatgccacgtacccaccataaaaatctttccaaagggcgacttcctctgc
acgttttgccgaagtatagccaacccagaaatcgagtattgtgatgaaagcaggagactc
aaagaggatcagagcctgactgctgaagaccaaaggaaatgtgaacgggtcctgctgtat
gttttctgtcatgagctgagtgtgggctttagggaaccggtccctagttctgtgcccaac
tactacaagattattaagcagcccatggatctgaaaagggtgaagaggaagctgcagctg
cggagctctcagtattacaagtccatacaagagtttgtgcaagatatgcgcctcgtcttc
aagaactgttcaacttacaatgagatgtctcgaataatccaagtttatgatgaggagaaa
gagattaatacgcaggtgggatcggaaatggcaatatctggcaaggcggtcagcctgtac
tttgaagagaagctggcagcaattttccctgaccagaactttcctgacacgccagaacca
gagtcccccgacgaaaaagagaaggaagacgaggacacagatgactctgaggaggaattc
atacaacccagacgcaaacgattgaaaatggatgataaaattgtccatgtcaagtga
DBGET
integrated database retrieval system
