Nothobranchius furzeri (turquoise killifish): 107391424
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Entry
107391424 CDS
T05163
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107391424
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107391424
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
Laminin_II
F5_F8_type_C
HTH_64
Motif
Other DBs
NCBI-GeneID:
107391424
NCBI-ProteinID:
XP_015824217
UniProt:
A0A1A8AFS7
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All DBs
Position
sgr15:complement(38068674..38139341)
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AA seq
1785 aa
AA seq
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MRASLLILVCALAAAAGQEPDHAHGCAHGSCYPATGDLLVGREKNLKASSTCGMRKKEPY
CIVSHLQEEKKCFECDSRRPYDPIYNINNHRVENVITTFKPHRKKSWWQSENGKSDVFIQ
LDLEAEFHFTHLIMTFKTFRPAALLIERSADLGRSWQVYRYFAHDCAESFPGVSQGPLRT
INDVICESRYSDIEPSTEGEVIYRVLDPSISIDDPYSPNIQNQLKITNLRVNFTKLHTLG
DNLLDPRAEIKEKYYYAIYELIVRGNCFCYGHASECAPIEGIRDDIEGMVHGRCVCNHNT
KGLNCEQCDDFYNDQPWRPAEGRNTNACKKCNCNGHSNVCHFDMAVYLSTGRASGGVCDD
CQDNTMGRSCEMCKPFYYKDPTRDIRDPQVCRACDCDPDGSQNGGMCDTHSDLSLGMVAG
QCRCKANVEGPRCDKCKSGFFGLSLTNPQGCEPCRCDRRGTVFGGSPCDPFSGDCICKRL
VTGRSCDQCLPDHWGLSHDPSGCRGCECDIGGALDNQCSMESGQCRCRSHMTGRECTQVE
SGYFFMALDHFLYEAEFARMEKGCLLETREHQPGRPASWTDLGFARVPEGGLLEFVINNV
PYSMEYDLLIRYESQMPRDWEEVRITVIRPGLIPTSSPCGNTIPDDDRLIVSLPAGSRFV
VPLQPVCLEEGVTYTLRFEFTRYQDANSILNGAAIAVILVDSIALMPRHSSMEMFNAGDP
ASNIRKQTYERYRCYEGTKSVIRPQMSDTCAKLISSMSAVINNGALSCNCDPQGSISSIC
DVRGGQCRCRPNVIGRRCDQCAPGTYGFGPSGCIPCECSLEGSATPLCDKFSGQCQCHPG
AFGQRCDGCRTGHWGFPSCRPCQCNGHADHCQQRTGACISCRDNTGGDKCERCANGYYGN
PVLGTTPGGQCRPCPCPDGPNSGRHFATSCYQDNRNRQVICNCNQGYTGARCEECAPGYY
GNPSQPGGRCQPCQCNNNIDMSDMDACDRQTGECRKCLYNTEGPNCGICKSGYFGDASRR
NCRKCTCNFLGTEHSQCIEREDCVCQRASGQCQCLPNVVGLTCDHCAPNHWNLASGMGCE
SCSCDPSNSVTSSCNEFTGQCQCREGFGGKTCTDCQENYWGNPRMQCRACDCDWRGIETS
QCHRVTGHCVCQQGVSGVRCDQCARGFAGVFPNCQPCHQCFGDWDRVVQDLAVRTKTLAE
RAHEIQTTGLTGPYEEIFIELEEKLAQAQSIVNARNATAAAVSVLMELIEDLRAHIGETT
ETLNRLEGDLTIVQDRNSDASKELSALEREAKELNLTSAQLHHQLDVLKNSNFLGAYDSI
RSSYNRSRDAERRANESTTTRPSTISQSADTRRRTERLIAAKKDDFSRKNTANKRVLGDL
NARAQRLDMKKINEKVCGSLGDAPCGESPCGGAGCRDDEGNRHCGGLNCGGAVAAADGAL
ERARHAEKELSEAMGEMQGLFTKVAEAKSQAEEAKGKAKAALDKATATKNKVERSNNNLR
DLIKQIRGFLTQEGADPDSIEAVANHVLQLSIPASPLQIRHLADEIKDRVRSLSNVDAIL
QQTQDDVRKAEKLLLDAKRARHHSEGVKTTAETVKQALVDARTAQASAEKAIAKAKADIG
ETESRLAQIRSEASDGERNLDDAVVRLGTLEQEINVLKTKRANNSMAAARAEETATMARE
KANEAKQILDGQLTDKYNEVQQRVDTKAKAVHGAKNKAEGLREEAKKLLKDAQNKLQKLA
ELETNYEDNRRRLEGKARQLDGLEDKMRDILKDINKQIQIYNTCQ
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcctctctgttaatactcgtctgtgccctggctgctgcagctggccaggagcct
gaccacgcccatggctgtgcccatggcagctgttacccggcaacaggagacctgttggtg
ggaagggagaaaaacttgaaggcctcgtccacatgtggcatgagaaaaaaagagccgtac
tgcatcgtcagccatttacaggaggagaagaagtgctttgagtgcgactccagacgtcca
tatgacccgatctacaacattaacaatcaccgggtggagaatgttattaccaccttcaaa
cctcaccgcaaaaagtcctggtggcagtccgagaacgggaaatcggatgtttttattcag
ctggatctggaggcggagtttcactttactcatctgatcatgacgtttaagaccttccgc
ccagcagccctgctaatcgaacggtcagcagatctaggccgctcctggcaggtctatcgc
tacttcgctcacgactgcgctgaatcctttcctggagtttcccagggtccgctgcgtacc
attaatgatgtcatctgtgagtcacgttattcagacatcgagccgtcaacagagggtgag
gtcatctacagagttctggatccatccatcagtattgacgacccatacagccccaacatc
cagaatcagttgaagatcaccaacttgagagttaacttcaccaaacttcacactcttgga
gataacctcctggacccccgagcggagatcaaagagaagtactactacgccatctatgag
ctcattgtgcgcggaaactgcttttgctacggccacgcctcagagtgtgcccccatcgag
ggcatcagggatgacatcgaaggaatggttcatggcagatgtgtgtgtaaccacaacacc
aaaggtttaaactgtgagcagtgcgatgacttctataacgaccagccctggagacctgcg
gaggggcgcaacaccaacgcctgcaagaagtgtaactgcaatggccactcaaacgtttgt
cactttgacatggccgtttatttgtccacgggaagagccagcggtggagtgtgtgatgac
tgtcaggacaacacaatgggacgcagctgtgagatgtgcaaaccgttttactacaaagac
cccaccagggacataagagacccgcaagtctgcagagcgtgcgactgtgacccagacggg
tcccagaacggagggatgtgtgacacccacagtgacctgtcgctcggcatggtggcgggt
cagtgccgctgcaaggctaacgtcgaggggccgcgctgcgacaagtgcaagtccggcttc
ttcggcctgagcctgaccaatcctcagggctgtgaaccttgtcgatgtgaccgtagagga
acggtttttggcggttccccatgcgatcctttcagcggagactgtatctgcaagcggctt
gtgaccggacgcagctgtgaccagtgtctgccggaccactgggggctgagccacgacccg
agcggctgccgaggctgtgagtgcgacatcggaggagcgcttgacaaccagtgctccatg
gagagcggacagtgccgctgccgcagccacatgacggggcgtgagtgcacacaggtggaa
tctggatatttctttatggctctggatcacttcctttatgaggcagagtttgctcgaatg
gagaagggttgtctcttagagacgagggaacaccagcctggtcgtcctgcttcgtggaca
gatttagggttcgctcgggttcctgaaggtggccttctggagtttgttattaataatgtc
ccttactccatggaatatgatttactcatccgctacgaatcacagatgccccgagactgg
gaggaggtgcggataacggtgatccgaccaggactgattcctaccagcagcccctgtgga
aacaccatcccagacgacgaccgacttatcgtgtctctgccggccggatccaggttcgtg
gtacctcttcagcctgtgtgtttggaggaaggtgtgacttacacgcttcggtttgagttc
acacgctatcaagacgccaacagcatcctcaacggagcggccatcgccgtcatcctcgta
gactctattgcgctgatgccgcgtcattcctccatggagatgttcaacgctggagatcct
gcctctaacatcaggaagcagacctacgagcggtaccggtgctatgaggggacaaagagc
gtgatccgcccacagatgagcgacacctgtgccaaactaatcagcagcatgtcggctgtt
ataaacaacggagctctgtcttgtaactgcgaccctcaggggtccatcagctccatttgt
gacgtgcgtgggggccagtgccgctgcagacccaacgtgattggacgacgctgtgaccag
tgtgcaccaggaacttatggtttcggaccttcaggctgcataccctgcgaatgcagcttg
gaaggatcagctacgccactttgtgataagtttagtggccagtgccagtgccatcccggg
gcgtttggccaacggtgcgacggatgtcggacgggtcactggggctttcccagctgccga
ccctgccagtgtaacggacacgcagaccactgccagcagagaaccggagcgtgcatcagc
tgcagggacaacacaggaggagacaagtgtgagaggtgtgccaatggttactatggtaac
cctgttttaggcacaacaccggggggtcagtgtcggccatgcccctgtccagatggtcct
aacagtggacgccattttgccacatcctgttaccaggacaatcgcaacagacaagttatc
tgcaactgtaaccaaggctacacaggtgctcgatgtgaggaatgcgccccaggttattat
ggtaatccctctcagccgggagggcgctgccaaccttgtcagtgcaacaacaacatagac
atgtcagacatggacgcttgtgacaggcagactggagagtgcaggaaatgtctttacaac
acagaaggaccgaactgtggcatctgcaagagtggatactttggggatgcgtccagacga
aactgcaggaagtgcacgtgcaactttctgggtactgagcacagtcagtgcatagagcgg
gaggactgcgtgtgccagcgcgcctcaggccagtgccagtgtttgccgaatgtcgtaggg
ctgacgtgtgaccactgcgccccaaaccattggaatctggccagtgggatgggctgtgag
tcctgcagctgcgaccccagtaactctgtaacgtcctcctgtaatgagttcaccggccag
tgtcaatgcagggaaggatttggaggaaagacctgcaccgactgccaggaaaactactgg
ggcaaccccaggatgcaatgcagagcttgtgactgcgactggcgtgggattgagacctcc
cagtgccaccgagtgactggtcactgtgtctgccagcagggggtgtcgggggttcgctgt
gaccagtgtgccagaggttttgctggtgttttccccaactgccagccctgccaccagtgc
tttggggactgggatcgtgtcgtgcaggacttggcagtgcgcacgaagactcttgccgag
cgtgcacatgagattcaaaccactgggctcaccggtccctatgaggaaatcttcatagag
ctagaggagaaactggcacaggctcagagcatcgtgaatgcacgtaacgccactgctgca
gctgtgtcggtcctgatggagctcatcgaggatcttagagcgcacatcggtgagacaacg
gagaccttaaaccgtctggaaggagacttgaccatcgtccaagacaggaactctgatgcg
agcaaggagctgagtgctctggaaagagaggccaaagagctgaacctcacctcggcgcag
cttcaccaccaactagatgtcctaaaaaactccaactttttaggggcgtacgacagcatc
cggagctcctacaacaggtctcgtgacgcagaacgacgcgctaacgaatcgaccaccacc
aggccgagcaccatcagccagtctgcagacacccgccgccgaaccgagcgcctcatcgct
gcgaagaaagacgacttcagtcgtaagaacactgcaaacaagcgtgtgctgggagacctc
aatgccagagcccagcgcctcgacatgaagaaaatcaatgagaaggtgtgtggctccttg
ggtgatgctccttgcggagagagcccatgtggaggagcaggttgccgtgacgacgaaggg
aaccgtcactgcggaggcctgaactgtggcggagccgtggcagcagctgacggtgctctg
gagagagccagacatgcagagaaggagctgagcgaggctatgggggagatgcaaggactt
tttactaaggtggcagaagctaagtctcaggcagaagaggcaaagggaaaagctaaagct
gctctggataaagccaccgccacaaaaaacaaagtggaacgctccaacaataacctcaga
gacctcatcaaacagatcagggggttccttactcaagaaggagcggacccggacagcatc
gaagcggtggcgaaccacgtgttgcagctctccatccctgcttcgcccctccagatcaga
catctcgcagatgaaatcaaagatcgagtccgcagcctctccaacgtggacgccatcttg
cagcagacgcaggatgacgtccgcaaagcggagaagctgctgctggacgctaagcgggct
aggcatcattctgagggagtgaagacgacagcagagacggtgaagcaggccttggtggac
gcaagaacagcccaggcttcggctgagaaagctatcgctaaagctaaagctgacatcggg
gagactgagtctcgactggcacagattcggtcggaagcatccgacggtgagaggaacctg
gatgacgcagtggtccgcctcggcacgctggagcaagagatcaacgtcctgaagaccaaa
cgggccaacaacagcatggcggcggccagagccgaggagacggccacgatggctcgagag
aaggcaaacgaagccaagcagattttagacggccagctgaccgataaatacaacgaggtg
cagcagcgagttgacaccaaagccaaggctgtgcacggcgccaagaacaaggcagaaggt
ctcagagaagaggcgaagaagctgctgaaggacgctcaaaacaagctgcagaaactagca
gaactggagacaaattatgaagacaaccggagaagactggagggcaaagcccggcagctg
gacggtttggaggacaagatgagagacatcctcaaagacatcaacaaacagatccagata
tacaacacgtgtcagtaa
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