Nothobranchius furzeri (turquoise killifish): 107391507
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Entry
107391507 CDS
T05163
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03030
DNA replication
nfu03410
Base excision repair
nfu03420
Nucleotide excision repair
nfu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107391507 (rfc2)
03410 Base excision repair
107391507 (rfc2)
03420 Nucleotide excision repair
107391507 (rfc2)
03430 Mismatch repair
107391507 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfu03032
]
107391507 (rfc2)
03036 Chromosome and associated proteins [BR:
nfu03036
]
107391507 (rfc2)
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107391507 (rfc2)
DNA replication proteins [BR:
nfu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107391507 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
107391507 (rfc2)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107391507 (rfc2)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107391507 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
107391507 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
nSTAND_NTPase5
AAA_lid_RFC1
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
Rad17
AAA_11
Viral_helicase1
RuvB_N
Mg_chelatase
nSTAND3
DEAD
AAA_19
AAA_5
MipZ
AAA_assoc_2
AAA_30
AAA_18
RNA_helicase
AAA_28
DNAX_ATPase_lid
SLFN-g3_helicase
MeaB
AAA_24
AAA_23
ABC_tran
NTPase_1
AAA_25
DUF815
AMP-binding_C_3
AAA_2
AAA_3
AAA_29
Motif
Other DBs
NCBI-GeneID:
107391507
NCBI-ProteinID:
XP_015824321
UniProt:
A0A1A7ZUH2
LinkDB
All DBs
Position
sgr15:39898932..39901476
Genome browser
AA seq
357 aa
AA seq
DB search
MEVDMAEAPGDPKPCESGAKADSEAGEPSSKAAGGSYELPWVEKYRPMKLDEIVGNEETV
SRLEVFAREGNVPNVIISGPPGTGKTTSILCLARALLGASMKDAVLELNASNDRGIDVVR
NKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSRTTRFALACNASDKI
IEPIQSRCAMLRYSKLTDGQILARLQEVVEKEHLAVSDDGLEAVIFTAQGDMRQALNNLQ
STNSGFGYINSENVFKVCDEPHPLLVKGMLGHCVDSNIDEAYKVVEQLWALGYSPEDIIG
NIFRVCKTYQMAEYLKLEFIKEIGFTHMRVAEGVNSLLQMAGLLGRLCSKTAPPAAS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggacatggcggaggcaccaggggatcccaaaccgtgtgaaagtggagcgaag
gcggacagcgaggccggggaaccctcgtctaaggctgccggtggctcctacgagctgccc
tgggtggagaaataccgaccgatgaagctggatgagatcgtggggaacgaggagaccgtg
agccggctggaggtgttcgcccgggagggaaacgtacccaacgtcatcatctcaggccct
cccggaacaggaaagaccaccagcatcctgtgcttggcgcgagctctgctgggtgcttcc
atgaaagatgctgttctggagctcaacgcttcaaacgacagggggatcgatgtggtgagg
aacaagatcaagatgtttgctcagcagaaggtcacactgcccaaaggccgacacaagatc
atcatcctggacgaggcggacagcatgaccgacggagctcagcaggccttaaggaggatc
atggagatctactccaggacaacgcgcttcgctctggcgtgcaatgcctccgataagatc
atcgagccgatccagtcccgctgcgccatgctgcgttactccaagctgaccgacgggcag
atcctggcccggctgcaggaggtggtggagaaggagcatttggctgtgtctgatgatggg
ctggaggccgtcatcttcaccgcgcagggagatatgagacaggcattaaacaacctgcag
tccaccaactccggctttggctacatcaacagcgagaacgtgtttaaggtgtgtgacgag
ccccaccccctgctggtgaaaggcatgctgggacactgcgtggattcgaacatcgatgag
gcctacaaggtggtggagcagctgtgggcgctgggttactccccagaggacatcatcgga
aacatcttcagggtctgtaagacttaccagatggccgagtacctgaagctggagttcatc
aaggagatcgggttcactcacatgcgggtggcggaaggcgtgaactccctgttgcagatg
gccggtctgctgggacgtctctgcagcaagacggcgccccctgctgccagctga
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