Nothobranchius furzeri (turquoise killifish): 107391815
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Entry
107391815 CDS
T05163
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
107391815 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107391815 (hdac5)
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107391815 (hdac5)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
107391815 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
107391815
NCBI-ProteinID:
XP_015824747
UniProt:
A0A8C6PT59
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All DBs
Position
sgr16:12661104..12772625
Genome browser
AA seq
1133 aa
AA seq
DB search
MLVHPTVSGLCAMLQTIYETESCFSSASTDSCHQPLELLSSSRSSGTAMPTAVMEVKSLP
EGMQSPTGAAGEQRAASGEAGSSPGEGPGGGGGPVDLRTEPRVGTLSGGAAVDTALREQQ
LQQELVLLKQQQELQKQLLFAEFQKKHEVLTRQHEVQLQEHLKQQQELLAAKRQQELEQK
RKLEQQRHEEQEKQRLEQQLLLLRNKEKGKESAIASTEVKLKLQEFLLSKKEPCPSGLNH
SFSPKCWGAQHTSLEQSSPPQSNTPGTPPSYKLPSLLGTYDGKDDFPLRKTVSEPNLKVR
SRLKQKVAERRSSPLLRRKDGTVISTFKKRAIEISVSSLCNSAPGSGPSSPNSSNSAIAN
GNTGSVPNIQSELRSLHQTLGADGTLSPLSLYTSPSLPNISLGLPANTHMTTPQKLSTQQ
EAERQAVQSLRGGGALTGKFLSTSSLPAGVAHDVESPTPTSHSAHSSLLQHVLLLEQARQ
QTALLVPVYNQSPLVTAERGITGGMRPVSKLPRHRPLARTQSAPLPQSPQALQQLVVQQQ
HQHFLEKHYKILSKGVDLPRPPPTHPEETEEELSETNDMQEDDSASPNRLQKQGSDDSTH
SSERLGVHVKGEEDHRSMHAKGESTESELDEEEEDDDVIQLRASEEEERGGFMQHPLQQM
AFQSSLSHRALGRTKSSPAGGVSPIKHLFTTGLVYDSLMLKHQCVCGNAHIHPEHAGRVQ
SIWSRLQETGLLSRCERIRGRKASVDEIQSVHSEFHTLLYGTSPLNRHKLDHKKLLGPIS
QKMYAVLPCGGIGVDSDTVWNEMHSSAAVRMAVGSVIELAFKVAGGELKNGFAVVRPPGH
HAEESTAMGFCFFNSVAITAKLLQQKLGVGKILIVDWDIHHGNGTQQAFYNDPSVLYISL
HRYDDGNFFPGSGAPEEVGSGAGVGFNVNIAWIGGVEPPMGDVEYLTAFRTVVMPIAQQF
SPDIVLVSAGFDAVEGHQSPLGGYNVSAKCFGQLTKLLMDLAGGRVVMALEGGHDLTAIC
DASEACVSALLGDLCDSAFQWSQEKPCPKAWASLERVIEIQSQHWPCLQTLSQTSGYVLM
ETPAGTQGQSEKDEAETVSAMASLSVDVEQPGSAEHTETSRSAEEPMEEEPVL
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgctggtacaccccacggtgtcaggactgtgtgccatgttgcagaccatctacgagacc
gagtcgtgtttctcctctgcaagcacagacagctgtcatcagcctctggagctcctgagc
agcagtcgaagctccggcactgccatgcccactgctgtgatggaggtgaagagcctccca
gaaggcatgcagagtccaacaggagcagccggcgagcagcgagcagcaagtggagaagct
ggtagtagtcctggagaaggccctggaggtggtggaggcccagtggaccttcgaaccgag
cctagggtggggactctatctggtggtgcagcagtggatacagcactgagagaacagcag
cttcagcaagaacttgtgctactgaaacagcagcaagaactccagaaacagctgctgttt
gcagagtttcagaaaaaacacgaagttctgacacggcaacacgaggtccagctgcaggaa
catttaaagcaacaacaagagctgttggcagcaaagcggcagcaagagctggagcagaaa
aggaaactggagcaacaaagacacgaagaacaggagaaacaaagattggagcaacagttg
ctgctgctgaggaacaaggagaagggcaaagagagtgccattgccagtacagaggtgaag
ctgaagctgcaggagtttctgctcagtaagaaagagccatgtcccagtggactcaaccat
tccttctccccaaagtgctggggggcccagcacacctccttggagcagagctccccccca
cagagcaatacccctggaactcccccctcatataaactcccttcactactgggaacctac
gatggcaaagacgactttcccctccgaaaaacagtctcagaaccaaacctgaaggtgcgc
tctcggttaaagcagaaggtggcagagcggcgcagctctccgctcctccgcaggaaggat
ggaactgtcatcagcaccttcaagaaaagggccattgagatctcagtgtcctctctgtgt
aatagcgctccaggctctggtcccagcagtcccaacagctccaactctgctattgccaat
ggcaacacagggtccgttccaaacatacagtcggagctgagatctctccaccagacgctg
ggggctgatggaacattgagtccactgagtctttacacctcaccctctctccccaacatc
tccctgggcctccctgccaacacacacatgacgaccccccagaagctgtccactcagcag
gaagctgagcgccaggccgtccaatcactacgagggggtggagctttaacagggaagttc
ctctccacctcatcactaccagcaggtgtagcacacgacgtagagagtcccacccccact
tctcattcagcccattcctcgttgctgcagcacgtgctgctgctggagcaggccaggcaa
cagaccgctctgctagtccccgtgtacaaccagtccccgctggttacagcagagcgaggc
atcaccgggggcatgcgacctgttagcaagctacctcgccatcggccccttgcacgcaca
cagagtgcacccttaccccagtccccccaagccctgcagcagctagtggtccaacagcaa
caccagcacttcttggagaaacactacaagattctgtcaaagggggtggaccttccgagg
cctccacccactcacccagaggaaacggaggaggagctatcagagaccaatgacatgcag
gaggatgacagtgcaagtccaaacagacttcaaaaacagggatcggacgacagcactcat
tcatctgagcggctgggcgtgcacgtaaagggcgaggaggaccacaggagcatgcatgcc
aaaggggagagtacagagagtgaactggatgaagaagaggaggacgatgatgtcatccag
ctgagggcgagtgaggaagaggagagggggggctttatgcagcatcccttgcagcagatg
gcgttccagtcctcgctctcccacagagctctgggaaggaccaagtcgtcacctgcaggt
ggggtcagccccatcaagcacctcttcactactgggctggtatatgacagtctgatgctg
aaacatcagtgtgtgtgtggcaatgctcacattcacccagagcatgctggaagagtccaa
agcatctggtccagactgcaggagaccggcttgctgagccgctgtgagaggattcgtggg
aggaaagcgtctgtggatgagatccagtcagtccactcagagttccacactctgctgtat
ggaaccagtccactgaaccggcacaaattggaccacaagaagcttttgggtcccatcagc
cagaagatgtatgctgttctcccgtgtggaggaataggggtggacagtgacactgtgtgg
aacgagatgcattcatcagcggcggtccgcatggcggtgggctcggttattgaactggct
tttaaagtggctggaggggagctgaagaatggctttgcagtggtgcgcccacctggtcac
catgctgaggagtccacagctatggggttttgtttcttcaactcggtagccatcactgcc
aagctgctgcagcagaaacttggagtgggaaagatcctgattgtggactgggacattcac
catggcaacggcacccagcaggccttctacaacgatcccagcgtcctctacatctccctc
catcggtacgatgacggaaactttttccctggcagcggagctccagaggaggtgggctca
ggtgcaggtgttggctttaatgtgaacatagcctggattggaggagtggagccccctatg
ggtgatgtggagtacctcacagccttcaggacggtggtaatgcccattgcccagcagttc
agtccagacatcgtcctggtgtctgcaggttttgatgcagtggaaggtcaccagtctcct
ctgggcggctacaacgtctctgccaagtgttttggccagctgaccaagctgctgatggat
ctggcaggtgggcgtgtcgtcatggccctggaaggtggccatgacctcactgctatctgt
gatgcatctgaagcttgtgtctctgcactcctgggagacctgtgtgactctgcgtttcag
tggtctcaggagaaaccgtgtcccaaggcctgggcctctctggagagagtcatagagatc
cagagtcaacactggccctgtctccagactttgtctcagaccagtggctacgtcttgatg
gagacacctgcggggactcagggccaatcagagaaagatgaggcagaaacagtcagcgcc
atggcctcgctgagcgttgatgtagagcaaccaggatcagctgaacacacagaaaccagc
agatctgcagaagagccgatggaggaagagcctgttctctaa
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integrated database retrieval system
