Nothobranchius furzeri (turquoise killifish): 107391866
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Entry
107391866 CDS
T05163
Symbol
capn3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107391866 (capn3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nfu01002
]
107391866 (capn3)
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
107391866 (capn3)
Peptidases and inhibitors [BR:
nfu01002
]
Cysteine peptidases
Family C2: calpain family
107391866 (capn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
107391866
NCBI-ProteinID:
XP_015824830
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Position
sgr16:15737850..15761711
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AA seq
716 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSVSKPVRFNGQDYNALRQECLQRKGLFEDDSFPATV
ESLGFKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLFRVVPQEQSFSENYAGLFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SLMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVDECKPSQHKDSKVRLVRLRNPWGQVE
WNGPWSDNSKEWTTLSKDEKDKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPDDNEVGCTFVVAL
MQKNRRKERKMGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFNSSKARSKSYINLREVT
QRFRLSSGEYVIIPSTYEPHQEGDFILRVFSEKRNTSEEIENRIEADHPVPAPALAGEES
EEDQQFRTIFQEIAGEEMEITANELRNVLNRVISTHKDLNTEGFSLESCRSMIALMDVSF
MDGTGRLNLQEFRHLWNKIKQWQGIFKHYNADQSGSINSYEMRNAVNDAGFRLNNQLYDI
ITMRYANENMNIDFDSFVSCLVRLEAMFRAFQAFDQDGDGTIRLSVLEWLQLTMYA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgccatacacaccgtctggctttttctgtgaccggctgatccgggaacgagaaaggaga
gacggggaaggttctgtgagcaaacccgtccgctttaacggtcaggactacaacgcgctg
aggcaggagtgcctgcagaggaagggtctgtttgaggatgactccttcccagccaccgtg
gaatctctgggcttcaaggagctgggacacaagtccaacaaggtcaagaacatcgtctgg
aagagacccaaggaaatctgtgagaatcctcagttcattgtaggaggagccagtaggacg
gacatctgtcagggagatctgggtgactgttggctgctggctgctatcgcctgcctgacg
ctcaatgagaagcttctgtttcgagttgttcctcaggagcagagcttctcagagaactac
gctggactcttccacttccagttctggcgttacggcgattgggtggatgtcgtcatcgac
gaccgcatcccaacctttaacaaccagctggtcttcaccaagtctgctgaaaggaacgag
ttctggagtgcactgctggagaaggcctacgccaagctgcacggctcctacgaggccctg
aagggaggaaacaccacggaggccatggaggatttcacaggtggcgtcactgagttttac
gagatgaaggaagctccaaaagagctctacaagatcatgaagaaggctctggagagaggc
tcgctcatgggctgctccatcgattctttggtccctgctcgctttgaaactcggacagtg
acgggactggtgaagggtcacgcctactcggtgacggcggtggacgagtgcaagccctct
cagcacaaggacagcaaggttcgactggtccggctcaggaacccgtggggtcaggtggag
tggaacggcccttggagtgacaactctaaggagtggactactctgtccaaggatgaaaaa
gacaaactgcaacaccagagtgctgaagatggagagttctggatgtcatttgaagacttt
aagaagaactacacaaagatcgagatctgtaacctcacgcctgatgccctggaggatgat
aagatccacaagtggacggtttctgtgaacgagggccgctgggtgagaggctgctcggcc
ggaggctgcaggaactatccagacactttctggaccaaccctcagtaccgccttcgcctg
ctggaggaggatgatgatccagacgataatgaggtgggctgcaccttcgtggtagcgctg
atgcagaagaacagaagaaaggaacgcaagatgggagccaacctgttcaccatcggattt
gctatttatgaggtgccaaaggagatgcacggaaacaagcagcacatgcagaaggatttc
ttcctgttcaactcctccaaggcccgctccaagtcctacatcaacctgagagaggtgacg
cagcgtttccgcctgagctccggcgagtacgttatcattccctccacctacgagccacat
caggagggagacttcatcctgcgggtcttctctgaaaagaggaacacctcagaggagata
gagaacaggatcgaggctgatcatcctgtgccagctccagccttggcgggggaagagagc
gaggaagatcaacagtttcggacaatttttcaggagatagccggcgaagagatggaaatc
acagccaacgaactgagaaacgttctcaacagagtcatcagcacacataaggacctgaac
acggagggcttcagcctggagagctgcagaagcatgatcgctctgatggacgtatccttt
atggacgggacgggtcgactcaacctacaggagtttagacatctatggaacaagatcaaa
cagtggcagggaatctttaaacattataacgctgaccagtctggcagcatcaacagttac
gagatgaggaatgccgtcaatgatgcaggcttccgtctcaacaaccagctgtatgacatc
atcaccatgcgctatgcaaacgagaacatgaacatagacttcgacagctttgtcagctgt
ctggttcgtctcgaagccatgttcagggccttccaggccttcgatcaggatggagatgga
accattagactcagtgtcctggagtggctccagttgaccatgtatgcctag
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