Nothobranchius furzeri (turquoise killifish): 107391878
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Entry
107391878 CDS
T05163
Name
(RefSeq) platelet binding protein GspB-like isoform X1
KO
K16741
alstrom syndrome protein 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107391878
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nfu03037
]
107391878
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
107391878
Cilium and associated proteins [BR:
nfu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107391878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
107391878
NCBI-ProteinID:
XP_015824845
UniProt:
A0A1A8U1Q7
LinkDB
All DBs
Position
sgr16:complement(16076573..16092290)
Genome browser
AA seq
2049 aa
AA seq
DB search
MAASPHLPADDDVSQSFEETSRCSEVWKQSGPKTDDWDRKQAQKESLQLQFQESHLSPSL
SLLPVASGEELSFTEPSFFQQSDSEFAPLRAYPDISVASERLCVPLQDQTNHWSEPSLLS
QHPLAQATILSEEGTNTLSEHILSPGIKNKEEKKARPHQKAATATGQGLWREGTGRQEGE
LETLTEVTDKNFRDVFQDDISFLNNDVPAQHLLDLLQKEVGMQSSSSSSISSASQSSEKR
TGSLMDDSKRTQTSKAITDQSLATREHPPGEASLHQQQTRPSEVRNITMGSRSTQPDDSS
ELLHTELLAEAHRLGDLEAESKNKQKAEMQSCQFSASLLKEESERRPRGKAGLGSVQRMA
PFLAATDWVRREQELLLSQSKTEIDGSYLGFLPQSQSTPGVFMAQMKTTLGQLSAIKSDK
NATYQSVTPQPAVSKMDICFPDQLRQSKDGSVQTSAEVQSLPSLNFRQKVDAWRTKPTPV
SGFSSPDPGGSGLTLNRTITPQAGTSLRLSATGAAQLNVPQNGSLALSGSSSPRRGEAVR
GGPGDKISGGSAAPPIASPLGRSQSHSSLSTVITSVCKHQHPDVPPEEEQSHNRDHAPQS
PGTSVHPSSLTGLGRFSDVSPDQVLTCSSSQDSCGGTKVGASVGTSSVVSLELDNYAPYW
TSKSTPPPPSKPQELNIDERIPLYLYILGVDQSPSNILTPFAPRDPTREPEFSPTDLCTI
KGSTGTPSKGTQASEDKSAAVAQSSSHPLSSCGTLVGNSPQKGEFSRSSLLSADSSISVP
FSLDSLGPAVPVPQQVGVRTSLPSGVEAAQSEGRVSPSSQPPTQQAVSQLANMADVSLTT
KAGVAEKKPDSPSQSSQGMTQDAEKSFVSLKESEIRRLLSQTENIVITGSAPHRLRSDED
IFSSTAGDLITRSSSDSMLISQKTKQTSLQPDNSSSQNLTVSSPATVTPNVAPDRAVSRP
GTTLSVSISARRTEPEGCSAAPADKLHPQQQVTMPSPAASMQQLYPEVGETPTPAQNHSS
SSVAHDNNQEAMSDGSSESSLAVRVAKLLQTESPDSVMSSTPSAADQEERRPKKRLQLCE
PLELDIKDRRCIEDIKKELLRNPTESQESTDTESSSSSHRVHKENNHSAEMCSSDSDNHL
EQPAALTQPQSPAHSHLEARVREIAAREGVTLPSVPSASITVSTHRHPPSPPLSPATPPL
GLMELLTEPGSPTGAKLLAADPNQQEVGSAQTASREPSPVFGERSSVRQGDHRVTAQPAS
RNRKRWDTMGGQPETSLEPSQDMQRFSHLKALSHLTGSGHTGPSSVSSTARTGNVSHVHL
SPSPKPPDHLSVSPVLSTHPDTVSGLPRQDFSFPREFASAVGLSRLPEQSNSRQPVGRDT
PALYEQVSQEKSTLSFPPQLRAEVVPRTVSAEAAAPVLLPYKPRGSDELFYVPQTEADVS
SADTTMESTHTGSDDAVPPHFSSQVLGKQDPGLDRGVSFRHPEGIYSKRLQMAGSEHTAD
GSLPAVSRAPTSSFQASATRSPSTIHQKVSLSRDQGTSPVQFLPYKQTDPGGVHPAYRET
IPTFVPQKRHLEPQQSSRTMDQMWKWTMESSRPTRDREALLLEHLSHLLHHMEADDPGVQ
ERRDPDPEEQLSRTQRRRATVRRDVGLQVEATLQPEQEAGHAPFSHSSSQSHRLSPVDRE
GTSSTVSSSVSTVDTTRLVRAFGAHRVQQLKSSSSLRKLYCSISRQRRGNLTNPPHDLTP
SEPTRSEGSVAPDSGSSSSWFPSHHGPSTALTAKRTVKLANKSVQAGDLEIVKNGTRRHT
RDVGTTFPSPGETRALGQISSSPSLAVRGRRRQKSPKPHKKIKPVPKGVSWFISAESLKS
ETKKENRPEGSTAGRLSTAWFEPYRTLRLWKEPLRQIYEDNQSCSGEPDPDPKTRTMSSG
LTRVSLQEALEMRCPGFISRSRQRLRRLALRAEERKLHAVLSRDTNLVFNQRGGPVKLPK
PAGTGLLLRAVPRREMIQRSKQMYENLPEVQRRREEERRRAEYQVYRLNARLYNKRITNR
VLGRREAWH
NT seq
6150 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatctcctcatttgccagcagatgatgatgtgagtcagtcttttgaggaaaca
agcagatgcagcgaggtctggaagcagtccgggcctaaaactgatgattgggaccgtaaa
caggcacagaaagaaagcctgcaactacaattccaggagagccacctgtctccatccctc
tccttgcttcccgtagcctctggagaggaactcagcttcactgaaccctcttttttccag
cagagtgattcagaatttgctcctttaagggcgtaccctgacatttctgtggcatcggag
aggctctgtgttcccctgcaggaccagactaatcactggtctgagcctagcttattgtcc
cagcaccctttggcccaggcaaccattctctctgaagaaggaacaaacactttatctgag
cacattttatcaccaggaatcaaaaacaaagaagaaaaaaaggctcgccctcatcaaaaa
gcagctactgctactggacaaggactatggagagaaggtacaggtcgccaagagggggag
ttagagacacttactgaagttacagataaaaactttagagatgtttttcaagatgacatt
tcttttttgaataatgatgttcctgcacaacatctcctggacctcctacagaaagaagtg
ggcatgcaaagcagcagcagtagttctatttcatctgcatcccagagctctgagaagaga
accgggtcattaatggatgactctaaaagaactcaaaccagtaaagctattaccgaccaa
agcttggctacaagagagcatccgcctggtgaagctagtctccaccagcagcagacaaga
ccttcagaggtccgtaacatcaccatgggttcccgcagcactcaacctgatgacagcagt
gagttgttgcacacagagctgctggcagaagcgcacagactcggcgacttagaagctgag
tcaaaaaacaaacaaaaggccgagatgcaatcatgccagttttctgcatctttacttaaa
gaagaatctgaaaggaggcccaggggtaaagcgggtctgggtagtgtgcagagaatggct
ccatttttagcagctactgactgggttcgcagagaacaagaactcttgttgtcgcagagc
aaaaccgagattgatgggtcctacctgggtttccttcctcagtctcagtctactccaggg
gtcttcatggctcagatgaagactacgttaggacaactttcagctataaaatctgataaa
aacgccacgtatcagtcagtcactccacagccagctgtctccaaaatggacatttgtttc
ccagatcaactccgtcaatccaaagatggttctgtacagacctctgcagaagtccagtcc
ctccctagtctcaacttcaggcagaaggtagatgcttggaggactaaaccgactccagtc
tcaggcttcagcagcccagacccaggaggatctggtctcactttgaatcgaaccatcacc
ccgcaggctggtacttcactgaggctttctgctacaggtgctgcccaactaaatgtccct
cagaatggctccttagccctctctggctcctcttctcctagaagaggggaggcagtccgt
gggggtcccggtgacaagatcagcggggggtctgcagcaccacccatagcctcaccttta
ggcaggtcccagtcccactcctctctcagcacagtcatcacgtcggtctgtaaacatcag
catccagatgtgcctccggaggaggagcagagccacaatcgggaccacgctccacagtct
cctggtacctcagttcatccatcatccctcacgggcctcggccgcttcagtgacgtgtca
cctgatcaagttctgacctgttcaagctcccaagacagttgcggtgggacaaaagtcgga
gcctctgttggaacatcctctgttgtcagtctggagctcgataactacgccccctactgg
acttcaaaatccaccccaccacctccttcaaagcctcaagagctcaacatcgatgaacga
attccgttgtacctctacatcctcggcgtagaccagtctccttctaacatcctgactcca
tttgcacccagagacccaaccagagaacccgagttctctcccactgatctctgcactatt
aaaggatcaaccggaaccccttcaaagggcactcaggcctctgaggacaagtctgcagct
gtagcccagagctcatcccatccactctcttcttgtgggactttagttggaaacagtccc
cagaaaggagagttctccaggtccagccttctgtcagcagactccagcatctccgttccc
tttagcctggacagtctaggcccagctgtccctgtcccacagcaagtcggagtgaggacg
tctcttccatcaggtgtagaagctgcccagagtgaaggcagagtgtcccccagctcccag
cctcccacgcagcaggctgtcagccagctcgccaacatggctgacgtctcattgaccaca
aaggctggtgtagcagaaaagaagcctgactctccttctcagagcagccaaggcatgact
caagatgctgagaagtccttcgttagcttaaaggagtcggagattcgtcgactcctcagt
caaacagagaacatcgtaatcactgggtctgctccacaccgccttcgctctgatgaagac
attttcagctctaccgctggagacctcataacgcgctcctcatcagactccatgcttatc
tcacagaaaacaaagcaaacctctttgcagcctgataattcatcttctcagaatctcacc
gtttcatctcctgccactgtaacgcccaacgtggcacctgacagggcggttagcagacca
gggacgaccctgagtgtctccatatccgcccggcggacggagcctgagggctgcagtgca
gcacctgctgataaactccacccacagcagcaagtcaccatgccttcaccagctgcgagc
atgcaacagctttacccagaggtgggggaaacacctacacctgcacaaaaccactcctcc
tcatctgtcgcccatgacaacaatcaggaagcgatgagcgatgggagcagtgagagctcg
ctggccgttagagtagctaaattactgcagactgaatctccagactccgtgatgtcctct
acacccagcgccgctgaccaggaggagaggaggcccaaaaagcggctccagctgtgtgaa
cctctggagttggacataaaagatcgacgctgcatcgaagacatcaagaaagagctgtta
aggaatcccactgagagccaagagagcacagatacagagagcagttcatcgagccacagg
gtccataaggagaacaaccattctgcagaaatgtgttcctctgattcagacaaccacctg
gagcagccagcagccctcacacagccacagagccctgcccacagccacttggaggcccga
gtgcgtgagattgctgccagagaaggagtaaccctcccgtctgtcccgtctgcatccatc
acagtatccacccacaggcaccccccctctcctcctctcagcccagccacacccccgctg
ggcctgatggagctcctcacagaaccaggcagtcccactggagccaaactgcttgcagca
gatccgaaccagcaggaagtgggctcagcacaaacagcaagcagagaaccatcacctgtg
tttggagagcgtagcagtgtccgtcaaggagaccaccgtgtgactgctcagccagcttca
cggaatcggaagaggtgggacactatgggaggacagcctgagacatctcttgaaccctca
caggatatgcagcgtttcagccatctgaaggcactctctcacctcactggctctggtcat
acaggtccatcctctgtttcatccactgcaaggacaggcaatgtctcacatgtccatctc
agtccatcccctaaaccaccggatcacctctctgtatctcctgtcctctctactcaccct
gacactgtctcaggattgcctcgccaagacttctccttccccagagagtttgcctctgct
gttggtttgtcccgtcttccagagcagtccaacagcaggcaacctgtgggacgggacacc
ccagccctgtatgaacaggtttctcaggaaaaatccactctgtcctttccaccacagctc
agagctgaggtggtacccagaaccgtctctgctgaagcagcagctccggtcctgttgccg
tacaaacctcgtggtagtgacgagctcttctacgtcccccagacagaagctgatgtctcc
tcagcagacaccaccatggagagcacacacacaggctcggacgacgccgtgcctccacac
ttcagcagccaagtcctgggaaagcaggacccggggttggaccgcggagtctcattcaga
cacccagaggggatctacagcaaacggctccagatggcaggttcagagcacacggcagat
ggcagccttccagctgtgagtcgagctccaacatcatcttttcaggcatctgctaccagg
tcaccctcaacgatccatcaaaaggtctctctctcaagggaccagggtaccagcccagtc
cagttcctcccctacaagcaaactgatcctggtggagttcatccagcctacagggaaacc
atcccaacctttgtccctcagaagagacacctggaaccccagcagagcagcagaaccatg
gaccagatgtggaagtggaccatggagtcgtcccgccctaccagagacagagaggctttg
ctgctggagcacctgtctcatctccttcatcacatggaggccgatgatcctggagtacag
gagagaagggatccagatccagaggagcagctcagtaggacccagaggaggagagccaca
gtcagaagagacgttgggctgcaggtggaggcgactcttcaacctgagcaggaagctggc
cacgcccctttctcacacagctcctcccagagccaccgtctctcaccagtcgacagggag
gggacctcatccacagtatccagctccgtgtccaccgtggacacaacgcgactggtccgg
gccttcggtgctcacagggtgcaacagctgaaaagcagctctagcctcaggaagctctac
tgctccatcagcaggcagaggagaggaaacctcaccaaccctcctcatgacctgacccca
tcagaacccacccgctctgagggatcggttgctcctgattctggatcatcatccagctgg
ttcccgtcgcaccacggtccctccacggctctgacagctaaacggacggtgaaactggcc
aacaaaagtgtccaagcaggagacctggagattgtgaagaacgggactcgacgacacacc
agagatgttggaactacattcccatctccaggtgaaaccagagctttgggtcagatctcc
tcctctccatctctggcagtgagaggaagaagaaggcagaaaagtcctaaacctcacaag
aagatcaaacctgttcctaaaggggtttcgtggttcatctctgctgagagtctaaaatca
gagacaaagaaggagaaccggcctgaggggtctactgctgggaggctgagcactgcttgg
tttgagccctaccgcacactcagactctggaaggagccactcagacagatctatgaggac
aatcagtcatgttctggagaacctgatccagatcctaaaactaggacaatgtcctccggt
ctgacccgtgtctctctgcaggaggctctagagatgcgttgtccagggtttatctcccgg
tccagacagaggctgagacgtctagctctgcgggcggaggagaggaagctgcatgccgtc
ctcagcagagacacaaacctggtgttcaaccagcgaggaggtccagtgaagcttcccaaa
cctgcaggcactggtctgctgctgagggccgttcccaggagggagatgatccagaggtcc
aaacagatgtacgagaatctgcccgaggttcagcggaggcgagaggaggagagaaggaga
gcagagtatcaggtctacaggctgaacgcacgcctctacaacaagaggatcaccaaccgg
gtcctggggcggagagaagcgtggcactga
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integrated database retrieval system
